Gene

KWMTBOMO11257  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012627

Annotation

dnaJ_homolog_subfamily_C_member_2_[Bombyx_mori]

Location

Bomo_Chr19(+):2053970-2060308      View in EpiBrowser

Transcription factor

MYB

Location in the cell

Nuclear   Reliability : 3.684

CDS

ATGGCCGAGAAAGATTCAAATAGTAATTGTCGTATAGTATCATTAGCGTGGCCATGTGTCAAAAAGAAAGTGGAATGCGTAGGGTCAGCATTCCTCAGATATTATAATATTAAATGTCACGGCGATGATCCATCCTTTACCGAGTCCAAATCTCACGAGAAGGCGGAGGAGATAGTCTTCGATGACGATGTGGAGTACTTGCGAAGCCTCGACCCTAAGGAGTGGAAGTCACAGGATCACTATGCGGTACTTGGTATGAAGGAACTTAGATATGAAGCTACTGATGACGACATTAAACGCGCTTACCGGCAAAAGGTTTTGAAACATCATCCCGACAAGCGTAAGGCGCAGGGCGAGGACATCAGGAGTGACGATGATTACTTTACATGTATCACTAAAGCATATGAAATCCTCGGGACACCAGTCAAACGTAGGTCTTATGATTCAGTTGACCACACTGTGGATGATACCATCCCCTCAACGGCTGAGATTAAGAAAGAAGGATTTTTCGAAGTATTTTCTAAACATTTTGAATCAAATGCTAGGTGGTCAGAAAAAAAGAATGTTCCATTACTTGGTGATGAGAACAGCTCTCGGGAACAGGTAGAAAGGTTTTATGCATTTTGGTATGAGTTTGAATCGTGGAGAGAATTCTCGTATCTTGATGAGGAAGAGAAGGAGAAGGGGGCTGATAGAGAGGAAAGAAGATGGATAGAGAAGCAGAATAAAGCTGCTAGAGCTAAACTAAAGAAAGAAGAGATGGCAAGGTTGAGGAGTTTGGTAGATCTGGCTTATACTTACGATCCTAGAATACAGAGGTTTAAGCAAGAGGACAAGGATAAAAAACTGGCTGCCAAAAAAGCCAGACAGGATGCTGTTCAGGCTAAAAAAGCAGAAGAAGAGCGTATAATGAAGGAAGCTCTCCTCGCTAAGCAAAAAGCAGAAGAGGCAGAGAGAGCACGTCTGGATGCTGCTAGAGCTGAACGAGAAATACAAAAGAAAAATTTACGCAAGGAACGAAAGGCACTTCGTGATCTTTGTAAGGCAAATAACTATTATGCCCAAGGGGAAGATCAAACTGTGACACATATGGCAGCTGTTGAGAAAATCTGTGAAGTCATGAAACTCACTGAACTTCAAGATTTTATGAAAGAACTTGGAATTAATGGTCGAATTGCTTTTGTTAAGACTGTGCAAGAAACAGAAGAAAAACTTGAAGCAGAGAGGAAAGCATTATTTGATACAAAGAAACAAGATGAGCAGAAAATAAAGAAAGATGCTGTTCTGAGGACACCTGTTGAGTGGACTGTTGAGATGACACAGATGCTCATTAAGGCTGTGAATTTATTCCCTGCTGGCACAAACCAGAGGTGGGAAGTGGTGGCAAATTTCTTGAACCAGCATTGTACATTTATTGATGACAAACGGCTATCAGCAAAAGAAGTATTAAACAAAGCTAAGGACTTACAAAGTTCAGACTTTTCAAAAAGTAGTCTAAAGAAAGCTGCCAATGAAGAGGCCTTTGACCAGTTTGAAAAAGAAAAGAAAAAAATTTCCAATCACGTAGACAATACCGGAATTTCAAAGAGCGATAAATTGGTGAATGGAACTACCACTGCTGAGATCAAGCCTGAAGAAAAACCCTGGACCAAAACAGAACAAGAATTGTTGGAACAAGCAATTAAGACGTTTCCAGTAAACACTTCAGAGCGGTGGGAGAAGATCTCTGACTGTATCCCGAATCGATCAAAAAAAGACTGCATGAAGAGATATAAAGAGTTAGTTGAATTAGTAAAAGCAAAGAAACAAGCCGCAAACTTGTCTAAATAA

Protein

MAEKDSNSNCRIVSLAWPCVKKKVECVGSAFLRYYNIKCHGDDPSFTESKSHEKAEEIVFDDDVEYLRSLDPKEWKSQDHYAVLGMKELRYEATDDDIKRAYRQKVLKHHPDKRKAQGEDIRSDDDYFTCITKAYEILGTPVKRRSYDSVDHTVDDTIPSTAEIKKEGFFEVFSKHFESNARWSEKKNVPLLGDENSSREQVERFYAFWYEFESWREFSYLDEEEKEKGADREERRWIEKQNKAARAKLKKEEMARLRSLVDLAYTYDPRIQRFKQEDKDKKLAAKKARQDAVQAKKAEEERIMKEALLAKQKAEEAERARLDAARAEREIQKKNLRKERKALRDLCKANNYYAQGEDQTVTHMAAVEKICEVMKLTELQDFMKELGINGRIAFVKTVQETEEKLEAERKALFDTKKQDEQKIKKDAVLRTPVEWTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEEAFDQFEKEKKKISNHVDNTGISKSDKLVNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTSERWEKISDCIPNRSKKDCMKRYKELVELVKAKKQAANLSK

Similarity

Belongs to the EF-1-beta/EF-1-delta family.
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.

Uniprot

H6VTR3   H9JSW5   A0A2H1VI51   A0A2A4JTE6   A0A2W1BMD3   A0A0N1I4W4   + More
A0A0N1IB61   A0A0L7LCC7   A0A3S2L914   A0A1L8DSE0   A0A1B0GJE5   D6WMD9   A0A336MKF7   A0A212F2G4   A0A2A3E660   A0A088AUY0   A0A0M8ZRR3   A0A2P8ZAX1   K7IXT0   A0A0L7QL40   A0A1I8N5J9   T1PGK7   W8BZV8   A0A151I5I7   A0A3L8D807   E2BJ12   A0A026WBB9   A0A232EPA7   A0A158P253   A0A195FH25   E2ARS6   A0A336M9H4   F4WE88   A0A0K8TN36   A0A1Y1KNC8   A0A195D385   E0VGD2   A0A0C9RM22   B4LEC1   B4KWK8   A0A0A1XRW7   A0A0M4EML5   A0A151J503   A0A034WIR4   B4N6I0   A0A0K8VEC3   B4IYW5   A0A0J7KZC6   A0A1I8P0R5   A0A2R7WLU3   N6TTU0   A0A1W4WMD6   B4QJN2   A0A0L0CKI5   A0A1A9VED8   A0A1A9W7I6   A0A1A9Z4L1   A0A1A9XHH9   A0A1B0BHV0   B0WW59   A0A1B0FA59   A0A1Q3EX95   Q7QJJ0   A0A1Q3EX01   B3M6U1   B4PE72   A0A1Q3EWU1   B3NIV8   Q9VP77   B4IAJ8   A0A1J1IT34   A0A1J1ITC7   A0A1B0DID7   E9FZM1   A0A3B0JAU5   Q29E37   B4H401   A0A0A9X5L4   A0A0P4VR15   R4G3D4   A0A0V0G6V0   A0A224XM04   A0A2H8TK11   A0A2S2NPR4   J9JQU3   A0A2S2QGZ4   A0A1D2MCN8   A0A293LS56   A0A1Y9IWD8   T1JNI0   A0A2R5LKW6   A0A3Q3WKQ9   I3JMR1   H3CHP8   A0A2C9GUK5   U3K749   A0A182GGS7   A0A1Z5L4T0   A0A3M0KB53   A0A218UAY1  

Pubmed

26434795    19121390    28756777    26354079    26227816    18362917    + More
19820115    22118469    29403074    20075255    25315136    24495485    30249741    20798317    24508170    28648823    21347285    21719571    26369729    28004739    20566863    17994087    25830018    25348373    18057021    23537049    22936249    26108605    12364791    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21292972    15632085    25401762    26823975    27129103    27289101    25186727    15496914    26483478    28528879   

EMBL

JN872898    AFC01237.1    BABH01035997    BABH01035998    BABH01035999    ODYU01002684    + More
SOQ40503.1    NWSH01000613    PCG75307.1    KZ149965    PZC76219.1    KQ461184    KPJ07530.1    KQ459449    KPJ00878.1    JTDY01001734    KOB73045.1    RSAL01000455    RVE41655.1    GFDF01004824    JAV09260.1    AJWK01020223    AJWK01020224    KQ971343    EFA03316.2    UFQT01001176    SSX29343.1    AGBW02010741    OWR47938.1    KZ288356    PBC27195.1    KQ435883    KOX69775.1    PYGN01000121    PSN53630.1    KQ414934    KOC59320.1    KA647937    AFP62566.1    GAMC01001638    JAC04918.1    KQ976425    KYM88066.1    QOIP01000012    RLU16213.1    GL448543    EFN84357.1    KK107302    EZA52956.1    NNAY01002981    OXU20183.1    ADTU01000084    KQ981606    KYN39683.1    GL442170    EFN63844.1    UFQT01000530    SSX25027.1    GL888102    EGI67526.1    GDAI01002263    JAI15340.1    GEZM01081314    JAV61710.1    KQ976956    KYN06829.1    DS235137    EEB12438.1    GBYB01014432    JAG84199.1    CH940647    EDW70097.1    CH933809    EDW19637.1    GBXI01000642    JAD13650.1    CP012525    ALC43017.1    KQ980071    KYN17859.1    GAKP01004917    JAC54035.1    CH964161    EDW79969.1    KRF99200.1    GDHF01015030    JAI37284.1    CH916366    EDV97673.1    LBMM01001893    KMQ95594.1    KK855054    PTY20576.1    APGK01054900    KB741253    ENN71806.1    CM000363    CM002912    EDX11332.1    KMZ00931.1    JRES01000267    KNC32780.1    JXJN01014603    DS232139    EDS35891.1    CCAG010006049    GFDL01015149    JAV19896.1    AAAB01008807    EAA03986.4    GFDL01015212    JAV19833.1    CH902618    EDV39777.1    CM000159    EDW95085.1    GFDL01015264    JAV19781.1    CH954178    EDV52604.1    AE014296    AY069523    AAF51678.1    AAL39668.1    CH480826    EDW44311.1    CVRI01000059    CRL03367.1    CRL03368.1    AJVK01034355    GL732528    EFX87080.1    OUUW01000002    SPP77122.1    CH379070    EAL30226.2    CH479208    EDW31116.1    GBHO01027597    GBRD01015911    GDHC01007741    JAG16007.1    JAG49915.1    JAQ10888.1    GDKW01001738    JAI54857.1    ACPB03001919    GAHY01002300    JAA75210.1    GECL01002358    JAP03766.1    GFTR01007375    JAW09051.1    GFXV01002692    MBW14497.1    GGMR01006525    MBY19144.1    ABLF02032475    GGMS01007768    MBY76971.1    LJIJ01001804    ODM90758.1    GFWV01006156    MAA30886.1    JH431734    GGLE01006044    MBY10170.1    AERX01052460    AERX01052461    AXCM01004497    AGTO01020852    JXUM01011155    KQ560324    KXJ83037.1    GFJQ02004601    JAW02369.1    QRBI01000112    RMC10368.1    MUZQ01000487    OWK50894.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000283053    + More
UP000092461    UP000007266    UP000007151    UP000242457    UP000005203    UP000053105    UP000245037    UP000002358    UP000053825    UP000095301    UP000078540    UP000279307    UP000008237    UP000053097    UP000215335    UP000005205    UP000078541    UP000000311    UP000007755    UP000078542    UP000009046    UP000008792    UP000009192    UP000092553    UP000078492    UP000007798    UP000001070    UP000036403    UP000095300    UP000019118    UP000192223    UP000000304    UP000037069    UP000078200    UP000091820    UP000092445    UP000092443    UP000092460    UP000002320    UP000092444    UP000007062    UP000007801    UP000002282    UP000008711    UP000000803    UP000001292    UP000183832    UP000092462    UP000000305    UP000268350    UP000001819    UP000008744    UP000015103    UP000007819    UP000094527    UP000075920    UP000261620    UP000005207    UP000007303    UP000075883    UP000016665    UP000069940    UP000249989    UP000269221    UP000197619   

PRIDE

H6VTR3    H9JSW5    Q9VP77   

Pfam

PF00249   Myb_DNA-binding        + More
PF00226   DnaJ
PF16717   RAC_head
PF13519   VWA_2
PF17906   HTH_48
PF00736   EF1_GNE
PF10587   EF-1_beta_acid
PF00735   Septin
PF00069   Pkinase

Interpro

IPR017884   SANT_dom        + More
IPR009057   Homeobox-like_sf       
IPR036869   J_dom_sf       
IPR001005   SANT/Myb       
IPR017877   Myb-like_dom       
IPR032003   RAC_head       
IPR001623   DnaJ_domain       
IPR017930   Myb_dom       
IPR002035   VWF_A       
IPR018253   DnaJ_domain_CS       
IPR041426   Mos1_HTH       
IPR014717   Transl_elong_EF1B/ribosomal_S6       
IPR001326   Transl_elong_EF1B_B/D_CS       
IPR014038   EF1B_bsu/dsu_GNE       
IPR036219   eEF-1beta-like_sf       
IPR018940   EF-1_beta_acid_region_euk       
IPR036465   vWFA_dom_sf       
IPR027417   P-loop_NTPase       
IPR030379   G_SEPTIN_dom       
IPR016491   Septin       
IPR000719   Prot_kinase_dom       
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       

SUPFAM

SSF46689   SSF46689        + More
SSF46565   SSF46565       
SSF54984   SSF54984       
SSF52540   SSF52540       
SSF53300   SSF53300       
SSF56112   SSF56112       

Gene 3D

1.10.287.110     3.30.70.60    

CDD

cd06257  DnaJ
cd00167  SANT
cd00292  EF1B
cd01850  CDC_Septin

ProteinModelPortal

H6VTR3   H9JSW5   A0A2H1VI51   A0A2A4JTE6   A0A2W1BMD3   A0A0N1I4W4   + More
A0A0N1IB61   A0A0L7LCC7   A0A3S2L914   A0A1L8DSE0   A0A1B0GJE5   D6WMD9   A0A336MKF7   A0A212F2G4   A0A2A3E660   A0A088AUY0   A0A0M8ZRR3   A0A2P8ZAX1   K7IXT0   A0A0L7QL40   A0A1I8N5J9   T1PGK7   W8BZV8   A0A151I5I7   A0A3L8D807   E2BJ12   A0A026WBB9   A0A232EPA7   A0A158P253   A0A195FH25   E2ARS6   A0A336M9H4   F4WE88   A0A0K8TN36   A0A1Y1KNC8   A0A195D385   E0VGD2   A0A0C9RM22   B4LEC1   B4KWK8   A0A0A1XRW7   A0A0M4EML5   A0A151J503   A0A034WIR4   B4N6I0   A0A0K8VEC3   B4IYW5   A0A0J7KZC6   A0A1I8P0R5   A0A2R7WLU3   N6TTU0   A0A1W4WMD6   B4QJN2   A0A0L0CKI5   A0A1A9VED8   A0A1A9W7I6   A0A1A9Z4L1   A0A1A9XHH9   A0A1B0BHV0   B0WW59   A0A1B0FA59   A0A1Q3EX95   Q7QJJ0   A0A1Q3EX01   B3M6U1   B4PE72   A0A1Q3EWU1   B3NIV8   Q9VP77   B4IAJ8   A0A1J1IT34   A0A1J1ITC7   A0A1B0DID7   E9FZM1   A0A3B0JAU5   Q29E37   B4H401   A0A0A9X5L4   A0A0P4VR15   R4G3D4   A0A0V0G6V0   A0A224XM04   A0A2H8TK11   A0A2S2NPR4   J9JQU3   A0A2S2QGZ4   A0A1D2MCN8   A0A293LS56   A0A1Y9IWD8   T1JNI0   A0A2R5LKW6   A0A3Q3WKQ9   I3JMR1   H3CHP8   A0A2C9GUK5   U3K749   A0A182GGS7   A0A1Z5L4T0   A0A3M0KB53   A0A218UAY1  

PDB

5DJE     E-value=1.53481e-17,     Score=221

KEGG

101746621    K09522 DnaJ homolog subfamily C member 2 | (RefSeq) DnaJ-23; dnaJ homolog subfamily C member 2

GO

GO:0005634   GO:0003677   GO:0005853   GO:0003746   GO:0005525   GO:0003682   GO:2000279   GO:0006260   GO:0045893   GO:0031965   GO:0030544   GO:0061649   GO:0005829   GO:0004672   GO:0005524   GO:0006508   GO:0016920   GO:0003735   GO:0006412   GO:0015935   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Subcellular location

Nucleus  

Length:

609

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00354

Exp number, first 60 AAs:

0.00349

Total prob of N-in:

0.00241

outside

1  -  609

 

 

Pi

188.867554

Theta

164.102303

Tajima's D

0.503358

CLR

0.08698

CSRT

0.52082395880206

Interpretation

Uncertain