Gene

KWMTBOMO10682

Pre Gene Modal

BGIBMGA008265

Annotation

PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Amyelois_transitella]

Location

Bomo_Chr18(+):429000-430435      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.573

CDS

ATGTATTGCTGTTCAGGTCTTCAAATAAAATCGGATGATGGTTTGCCGTCTAAAATATGTGAATTTTGCAAGAAAGAGCTCGATGCTTGTTACTATTTCGTTTTAAAATGTGAAGCAGCAGATAAGAGATTACGATTGAAAATTGCAGAAAAACCAAAATTTGACGCGACTAAGACCGAAATCAAATTGGAAGCCGACGATGACGATAATCATTGGGACGAAGAGACATTCGCGCTTAGACTGTGCGATGTTGATATTAAGTCAGAATTTACAGAACAGAAAGCTGAGGTACGAAAGAAAAGACGTTATACCAAACGTACTAAATATAAAAGGCGTCAAGATGGTAGCTGTAAATGCCCAGTTTGTGGTAGAGTTTGCATAAACCCGTCCACTCTGACAATCCACATGCGAGTACACAGTAGCGAAAAATCCTTCTCATGTACAGTATGCAATAGTAAATATAAAGATGCAGGCAATCTCAAACGGCATATGAACAGAAAACATGATCCGATGAGGCAAAGACAGTTTGTGTGTGAAAATTGTGGTAAAGCATTCTATTCTAAAAGAGATGTTGAAATCCATATGAGGACGCACACCGGGGAGACACCTTACACTTGTAATGCATGTGGAAAGAGTTTTACACAGGCAACTTCATTGTTTCGCCATAGATTAAGACATGAGAGTGAAAAGACTTATTCATGTACTATATGTAACAAACTTTTCCGAACCAAAGACGGATTGAGGAACCACGCATTAGTACATACATCAGAAAAGAAGTTTTCGTGTCCTATTTGTAATATGTCTTTTAAATATAAGAACAATGTACACAAGCACATAAAAAATCATTCTGAGCCTAAGCGTTTTGTTTGCAACTACTGTGGGAGATCATTCAGTATGAAAGGTGGCTTGAAGAGTCACATAGACAGACAGCATTCTGAGAAATCAGGTTATTGTAATGTATGTTCAAAACATGTACCAAACTTAGAAGTTCATAGTTGGAAGCACACAGGGCAACGGCCATTGAAATGTGAACTGTGCTCAAGTAGCTTTTCACAGCTTAAAGCTTTGACACATCATGTTAACTTCAAACATAAGCAAACCTCAAAACACAAATGCCTTGTTGCCGGCTGTGAAATGGCATTTCCATCTAAACCGATGCTAGATTATCACACTGCCAAAGTACACAGTACAGACATTCCATTTCCTTGTGACCGATGCTCTAGGGGTTTCTACAGGAAGAATGACCTATCTCGGCATATGATTGGAACCCATAAGGAAAAGTTACTGTGA

Protein

MYCCSGLQIKSDDGLPSKICEFCKKELDACYYFVLKCEAADKRLRLKIAEKPKFDATKTEIKLEADDDDNHWDEETFALRLCDVDIKSEFTEQKAEVRKKRRYTKRTKYKRRQDGSCKCPVCGRVCINPSTLTIHMRVHSSEKSFSCTVCNSKYKDAGNLKRHMNRKHDPMRQRQFVCENCGKAFYSKRDVEIHMRTHTGETPYTCNACGKSFTQATSLFRHRLRHESEKTYSCTICNKLFRTKDGLRNHALVHTSEKKFSCPICNMSFKYKNNVHKHIKNHSEPKRFVCNYCGRSFSMKGGLKSHIDRQHSEKSGYCNVCSKHVPNLEVHSWKHTGQRPLKCELCSSSFSQLKALTHHVNFKHKQTSKHKCLVAGCEMAFPSKPMLDYHTAKVHSTDIPFPCDRCSRGFYRKNDLSRHMIGTHKEKLL

Uniprot

H9JFG8   A0A2H1VRF5   A0A2A4J6N3   A0A0L7LJU2   A0A1E1W145   A0A0N0PDJ0   + More
A0A2H1VQD8   A0A2W1BAG8   A0A2A4J5C1   A0A212FJH1   A0A1E1WTC0   H9JFF3   A0A3Q2E8A1   A0A286Y883   A0A3Q2PFJ3   A0A096MHR5   A0A087YLI0   A0A096LUK9   A0A146TH19   A0A3B3XXE1   A0A3Q2FUV5   A0A3B4X221   A0A3Q2ZMS6   A0A3P9P7N6   A0A087XUH1   F1R1N4   A0A0G2KZ75   H2LRY0   A8WFT7   A0A3Q2Y157   F1RBR7   A0A3P9L696   A0A0G2KWF9   A0A0G2KYK5   A0A3B3C1L2   J9JU10   A0A3B5QK52   A0A1L1QZT7   A0A3Q3E0D2   A0A3Q3FDX0   A0A3Q2CMN1   A0A087YHF7   A0A146TIJ8   X1WE00   A0A3B5QGP7   A0A3P9HZE8   A0A3B5RD16   A0A3Q2Y222   A0A3N0YPH5   A0A3Q2C823   A0A3B5QB45   A0A146UZ45   A0A146TIZ0   A0A146UZA4   A0A3B3YBK0   A0A3B5PXE4   A0A3B5QKG7   A0A3Q2ZDK0   A0A3B5QKI9   A0A3N0YPK2   A0A146RIA4   A0A0L8HAN2   A0A096MFL3   A0A096M5Z7   A0A3B5R9T9   A0A3B5L088   A0A146ZJI9   A0A3B5MST0   A0A3P9P7H3   A0A0L8FUV5   A0A3P9L6S7   H0WEY2   A0A3B5B8C8   A0A3Q2PGR9   A0A146T809   A0A087TJ00   A0A096LQA3   A0A3Q2TAN7   A0A146ZJP7   A0A3B5B930   A0A3B5QL61   A0A3P9HZA4   A0A2I4AY45   A0A3Q2QQW9   H0WE53   A8KBM4   A0A3Q2YZL5   A0A3B5QK35   A0A3B3TWS1   A0A3P9I2J0   A0A096MHZ3   A0A3Q2Z783   A0A3Q3K173   A0A2P6KAI9   A0A3B3UHZ5   A0A3Q2P4A8   A0A3B5MFP5   A0A3P9I5D1  

EC Number

2.1.1.-

Pubmed

19121390    26227816    26354079    28756777    22118469    23594743    + More
17554307    29451363    23542700   

EMBL

BABH01034947    ODYU01003824    SOQ43062.1    NWSH01002900    PCG67338.1    JTDY01000800    + More
KOB75833.1    GDQN01010410    JAT80644.1    KQ460326    KPJ15702.1    SOQ43063.1    KZ150415    PZC70964.1    PCG67337.1    AGBW02008274    OWR53859.1    GDQN01001003    JAT90051.1    BX649307    AYCK01026365    AYCK01026366    AYCK01026367    AYCK01026368    AYCK01026369    AYCK01026370    AYCK01026371    AYCK01026372    AYCK01001272    AYCK01001273    GCES01094089    JAQ92233.1    AYCK01017664    BX649341    CR407594    BX855614    BC154452    AAI54453.1    CU467646    ABLF02009825    AYCK01007750    AYCK01007751    AYCK01007752    GCES01093610    JAQ92712.1    BX248582    RJVU01033420    ROL48109.1    GCES01075843    JAR10480.1    GCES01093602    JAQ92720.1    GCES01075831    JAR10492.1    ROL48094.1    GCES01118177    JAQ68145.1    KQ418671    KOF86363.1    AYCK01001268    GCES01019800    JAR66523.1    KQ426253    KOF68487.1    BX936382    GCES01097360    JAQ88962.1    KK115419    KFM65089.1    GCES01019793    JAR66530.1    BX469933    CR846087    BC154171    AAI54172.1    AYCK01020014    MWRG01017971    PRD23337.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000265020    + More
UP000000437    UP000265000    UP000028760    UP000261480    UP000261360    UP000264800    UP000242638    UP000001038    UP000264820    UP000265180    UP000261560    UP000007819    UP000002852    UP000261660    UP000265200    UP000053454    UP000261380    UP000261400    UP000054359    UP000192220    UP000261500    UP000261600   

PRIDE

H9JFG8    H9JFF3   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
IPR003656   Znf_BED       
IPR017114   YY-1-like       
IPR017125   Znf_PRDM5-like       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JFG8   A0A2H1VRF5   A0A2A4J6N3   A0A0L7LJU2   A0A1E1W145   A0A0N0PDJ0   + More
A0A2H1VQD8   A0A2W1BAG8   A0A2A4J5C1   A0A212FJH1   A0A1E1WTC0   H9JFF3   A0A3Q2E8A1   A0A286Y883   A0A3Q2PFJ3   A0A096MHR5   A0A087YLI0   A0A096LUK9   A0A146TH19   A0A3B3XXE1   A0A3Q2FUV5   A0A3B4X221   A0A3Q2ZMS6   A0A3P9P7N6   A0A087XUH1   F1R1N4   A0A0G2KZ75   H2LRY0   A8WFT7   A0A3Q2Y157   F1RBR7   A0A3P9L696   A0A0G2KWF9   A0A0G2KYK5   A0A3B3C1L2   J9JU10   A0A3B5QK52   A0A1L1QZT7   A0A3Q3E0D2   A0A3Q3FDX0   A0A3Q2CMN1   A0A087YHF7   A0A146TIJ8   X1WE00   A0A3B5QGP7   A0A3P9HZE8   A0A3B5RD16   A0A3Q2Y222   A0A3N0YPH5   A0A3Q2C823   A0A3B5QB45   A0A146UZ45   A0A146TIZ0   A0A146UZA4   A0A3B3YBK0   A0A3B5PXE4   A0A3B5QKG7   A0A3Q2ZDK0   A0A3B5QKI9   A0A3N0YPK2   A0A146RIA4   A0A0L8HAN2   A0A096MFL3   A0A096M5Z7   A0A3B5R9T9   A0A3B5L088   A0A146ZJI9   A0A3B5MST0   A0A3P9P7H3   A0A0L8FUV5   A0A3P9L6S7   H0WEY2   A0A3B5B8C8   A0A3Q2PGR9   A0A146T809   A0A087TJ00   A0A096LQA3   A0A3Q2TAN7   A0A146ZJP7   A0A3B5B930   A0A3B5QL61   A0A3P9HZA4   A0A2I4AY45   A0A3Q2QQW9   H0WE53   A8KBM4   A0A3Q2YZL5   A0A3B5QK35   A0A3B3TWS1   A0A3P9I2J0   A0A096MHZ3   A0A3Q2Z783   A0A3Q3K173   A0A2P6KAI9   A0A3B3UHZ5   A0A3Q2P4A8   A0A3B5MFP5   A0A3P9I5D1  

PDB

5V3M     E-value=1.02921e-30,     Score=333

KEGG

101736182    no KO assigned | (RefSeq) zinc finger protein 431-like

GO

GO:0008270   GO:0003676   GO:0005634   GO:0003677   GO:0000976   GO:0046872   GO:0016021   GO:0006457   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

Length:

429

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00101

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00875

outside

1  -  429

 

 

Pi

243.808109

Theta

224.397424

Tajima's D

0.418973

CLR

33.311642

CSRT

0.487875606219689

Interpretation

Uncertain