Gene

KWMTBOMO10150  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005634

Annotation

PREDICTED:_protein_shuttle_craft_[Bombyx_mori]

Location

Bomo_Chr17(-):3108772-3117703      View in EpiBrowser

Full name

Protein shuttle craft      

Transcription factor

zf-NF-X1

Location in the cell

Extracellular   Reliability : 3.034

CDS

ATGACAACAATACCAAAAGACAAACGCAAGTCGTGCACGGATCCGATCCCGCTGTGCGGAAACATCTGCGCCAAGCCGCTGCCCTGCGGCCCGGCCGGTGACAAGCATTTCTGCAAACTAGACTGTCATGAAGGTCCTTGTCCAGTTTGTCCTGACAAGACCTTACTGCCATGCCGCTGTGGTCATTCGAACCGCGAGGTTCCGTGCGCTGAGCTACCGGATATGTATAACAATGTGTTCTGTCAGAAGAAATGTAATAAGAAACTGTCGTGCGGTCGGCACCGTTGCCGCGCGTGCTGCTGCGCGGACCCGCAGCACCGGTGCGGGCTCGTGTGCGGGCGCTCGCTCGCCTGCCAGACGCACCGCTGTCAGGACTTCTGCCACACCGGACACTGCGCGCCGTGCCCCACGCTCAGCTTCGAGGAGCTGAGCTGTACGTGCGGGCGCGAGGTGCTGCTGCCGCCCGTGCGCTGCGGCACGCGGCCCCCGCCCTGCAGCGCGCCGTGCCGCCGCGCGCGCCCCTGCGGGCACGAGCCGCTGCACTCGTGCCACACCGGGGACTGTCCGCCCTGCGTCGTGCTCACCACCAGGACCTGCCACGGCGGACACGAGGAACGAAAAACCATCCCGTGTTCGCAAGAAGAGTTCTCGTGCGGCCTCCCGTGCGGCAAACCTCTCCCTTGCGGTAAACATACCTGCATCAAGGTCTGTCACAAGGGACCGTGCGATGCCGGCAAGTGCACCCAGCCGTGCAACGAGAAGCGTGCGAGCTGCGGGCACCCGTGCGGCGCCGCGTGCCACTCCGGCGCGGCGGGCGGCGCGGGCGCGCTGTGCCCGAGCGCGGCGCCGTGCCGCCGCACCGTGCGCGCCACGTGTCCCTGCAAACGGAAATCGGCCGAGAGACCCTGCTTCGAAAACGCACGAGATTACGATAAAATGATGAGTGCTCTTGCGGCCACCAAGATCCAAGAGGGAGGCTCTGTTGACTTGTCCGACGCACAGCGCGCCGTCAATATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCCAGCGCGAGCCCGCCTTCGCCTACCACGTGCACAACCAGCTCACCGAGCTCGTGCACCTCGCCAAGAAGTCGAAACAGAAGACTCGCTCGCACTCGTTCCCGTCGATGAACAGACAGAAGCGGCAGTTCATCCACGAGCTTTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCGGAGCCCAACAGGAACGTGGTGGCCACTGCCGACAAGGAGAAGTCGTGGTTGCCGGCGATGAGCATAATGGAAGTGTTGTCGCGTGAGGCGGGCCGGCGGCGCGTGCCCGGCCCCGTGCTGCGGACCGCGCACTCCTCCGCCGCCTCTTCAGCCTCGACGACCTCCTCCTCCGCCGCTAACAAGTAA

Protein

MTTIPKDKRKSCTDPIPLCGNICAKPLPCGPAGDKHFCKLDCHEGPCPVCPDKTLLPCRCGHSNREVPCAELPDMYNNVFCQKKCNKKLSCGRHRCRACCCADPQHRCGLVCGRSLACQTHRCQDFCHTGHCAPCPTLSFEELSCTCGREVLLPPVRCGTRPPPCSAPCRRARPCGHEPLHSCHTGDCPPCVVLTTRTCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKVCHKGPCDAGKCTQPCNEKRASCGHPCGAACHSGAAGGAGALCPSAAPCRRTVRATCPCKRKSAERPCFENARDYDKMMSALAATKIQEGGSVDLSDAQRAVNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRATAQREPAFAYHVHNQLTELVHLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSIMEVLSREAGRRRVPGPVLRTAHSSAASSASTTSSSAANK

Similarity

Belongs to the NFX1 family.

Keywords

Alternative splicing   Complete proteome   DNA-binding   Metal-binding   Nucleus   Phosphoprotein   Reference proteome   Repeat   RNA-binding   Transcription   Transcription regulation   Zinc   Zinc-finger  

Feature

chain  Protein shuttle craft
splice variant  In isoform B.

Uniprot

H9J7Z2   A0A2A4K2T6   A0A2A4K355   A0A2H1V9F9   A0A3S2LJM5   A0A194QXJ0   + More
A0A194QGR9   A0A212EP74   L7X1P9   D0AB98   D6WMN1   A0A139WHD1   A0A2P8Z3T6   A0A1B6EVN5   E0VEM9   A0A1B6JPB1   A0A2J7QGB1   A0A2J7QGA5   A0A1B6KND9   A0A195C826   A0A1B6D4K5   A0A1B0GP93   A0A2A3E3N7   A0A1Y1JZ76   A0A088ART8   W8APS1   A0A0A9W7M4   A0A0L7RDI2   V5GY42   A0A0A9ZGP6   A0A146LIZ1   A0A1I8Q8G4   A0A0L0CJR7   B4LWS2   A0A1B0CN35   T1P9M2   A0A0M4E2B7   Q17KM1   A0A1I8N6G0   A0A1I8N6H3   B0W1A0   A0A034VNI7   B4MZE5   A0A023EY35   A0A1Q3FEQ8   A0A1Q3FCB1   A0A1Q3FEQ0   A0A1B0FP18   A0A1A9X299   A0A1B0A839   A0A182H838   A0A1A9V167   A0A1B0BFJ2   A0A1A9X8Y5   A0A310SMP3   A0A0A1X737   A0A1W4WC55   E8NH79   Q29P77   B4GK89   A0A3B0KT64   A0A0K8V596   A0A3B0L0K6   B3MM96   B4NYD7   B4LRX1   B3N5P4   A0A0M3QTY5   B4KLB0   A0A2M4AEV2   W5JVC9   M9PDG3   P40798-2   P40798   M9PD57   A0A182PVX0   A0A0J9R264   A0A0J9R2N5   A0A182F3S3   A0A0P5VH86   B4HXM6   A0A0P5YM02   E9H0P6   A0A0P5XCR0   B4JAX9   A0A0P5A3Q8   A0A0P5AUP1   A0A0N8DCJ5   A0A0P5FMM2   A0A0P5LKS5   A0A0P4ZYX1   A0A162CCJ7   A0A0P5A851   A0A0P5SWI5   A0A0P5S2J5   A0A0N8EQ75   A0A0P5DJZ2   A0A084VMJ6   A0A0P6BDQ9   A0A0P5UQC7  

Pubmed

19121390    26354079    22118469    23674305    18362917    19820115    + More
29403074    20566863    28004739    24495485    25401762    26823975    26108605    17994087    17510324    25315136    25348373    24945155    26483478    25830018    15632085    17550304    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    8524296    10471707    10731138    18327897    22936249    21292972    24438588   

EMBL

BABH01020191    BABH01020192    NWSH01000227    PCG78214.1    PCG78213.1    ODYU01001380    + More
SOQ37468.1    RSAL01000090    RVE48091.1    KQ461155    KPJ08291.1    KQ459232    KPJ02641.1    AGBW02013517    OWR43279.1    KC469893    AGC92703.2    FP102340    CBH09293.1    KQ971343    EFA04758.2    KYB27326.1    PYGN01000208    PSN51156.1    GECZ01027838    JAS41931.1    DS235093    EEB11835.1    GECU01009311    GECU01006610    JAS98395.1    JAT01097.1    NEVH01014379    PNF27624.1    PNF27625.1    GEBQ01027027    JAT12950.1    KQ978220    KYM96321.1    GEDC01016725    JAS20573.1    AJVK01033236    AJVK01033237    KZ288427    PBC25866.1    GEZM01096724    JAV54622.1    GAMC01020057    GAMC01020055    JAB86498.1    GBHO01040188    GBHO01007510    JAG03416.1    JAG36094.1    KQ414614    KOC68840.1    GALX01003148    JAB65318.1    GBHO01007718    GBHO01000278    JAG35886.1    JAG43326.1    GDHC01011747    JAQ06882.1    JRES01000305    KNC32491.1    CH940650    EDW66643.2    AJWK01019755    KA645427    AFP60056.1    CP012523    ALC39716.1    CH477223    EAT47205.1    DS231821    EDS44970.1    GAKP01015839    JAC43113.1    CH963913    EDW77484.2    GAPW01000154    JAC13444.1    GFDL01009011    JAV26034.1    GFDL01009855    JAV25190.1    GFDL01009025    JAV26020.1    CCAG010018380    JXUM01028608    JXUM01028609    JXUM01028610    KQ560826    KXJ80724.1    JXJN01013499    KQ760869    OAD58748.1    GBXI01007360    JAD06932.1    BT125955    ADX35934.1    CH379058    EAL34416.2    CH479184    EDW37055.1    OUUW01000040    SPP89929.1    GDHF01018212    GDHF01005212    JAI34102.1    JAI47102.1    SPP89928.1    CH902620    EDV31856.1    CM000157    EDW89773.1    CH940649    EDW63647.1    CH954177    EDV58003.1    ALC39723.1    CH933807    EDW11771.1    GGFK01006000    MBW39321.1    ADMH02000386    ETN66754.1    AE014134    AGB92995.1    U09306    AF145679    AGB92996.1    CM002910    KMY90342.1    KMY90343.1    GDIP01115026    JAL88688.1    CH480818    EDW51806.1    GDIP01055985    JAM47730.1    GL732581    EFX74683.1    GDIP01074037    JAM29678.1    CH916368    EDW02849.1    GDIP01207964    JAJ15438.1    GDIP01208014    JAJ15388.1    GDIP01047087    JAM56628.1    GDIQ01254719    JAJ97005.1    GDIQ01172193    JAK79532.1    GDIP01206262    JAJ17140.1    LRGB01001005    KZS14152.1    GDIP01206263    JAJ17139.1    GDIP01139280    JAL64434.1    GDIQ01102271    JAL49455.1    GDIQ01004668    JAN90069.1    GDIP01158477    JAJ64925.1    ATLV01014599    KE524975    KFB39190.1    GDIP01016661    JAM87054.1    GDIP01127222    JAL76492.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000007266    UP000245037    UP000009046    UP000235965    UP000078542    UP000092462    UP000242457    UP000005203    UP000053825    UP000095300    UP000037069    UP000008792    UP000092461    UP000092553    UP000008820    UP000095301    UP000002320    UP000007798    UP000092444    UP000091820    UP000092445    UP000069940    UP000249989    UP000078200    UP000092460    UP000092443    UP000192221    UP000001819    UP000008744    UP000268350    UP000007801    UP000002282    UP000008711    UP000009192    UP000000673    UP000000803    UP000075885    UP000069272    UP000001292    UP000000305    UP000001070    UP000076858    UP000030765   

PRIDE

H9J7Z2    E8NH79    P40798   

Pfam

PF01424   R3H        + More
PF01422   zf-NF-X1

Interpro

IPR034076   R3H_NF-X1        + More
IPR034078   NFX1_fam       
IPR001374   R3H_dom       
IPR019787   Znf_PHD-finger       
IPR036867   R3H_dom_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR001841   Znf_RING       
IPR000967   Znf_NFX1       

SUPFAM

SSF82708   SSF82708       

Gene 3D

3.30.1370.50    

CDD

cd02643  R3H_NF-X1

ProteinModelPortal

H9J7Z2   A0A2A4K2T6   A0A2A4K355   A0A2H1V9F9   A0A3S2LJM5   A0A194QXJ0   + More
A0A194QGR9   A0A212EP74   L7X1P9   D0AB98   D6WMN1   A0A139WHD1   A0A2P8Z3T6   A0A1B6EVN5   E0VEM9   A0A1B6JPB1   A0A2J7QGB1   A0A2J7QGA5   A0A1B6KND9   A0A195C826   A0A1B6D4K5   A0A1B0GP93   A0A2A3E3N7   A0A1Y1JZ76   A0A088ART8   W8APS1   A0A0A9W7M4   A0A0L7RDI2   V5GY42   A0A0A9ZGP6   A0A146LIZ1   A0A1I8Q8G4   A0A0L0CJR7   B4LWS2   A0A1B0CN35   T1P9M2   A0A0M4E2B7   Q17KM1   A0A1I8N6G0   A0A1I8N6H3   B0W1A0   A0A034VNI7   B4MZE5   A0A023EY35   A0A1Q3FEQ8   A0A1Q3FCB1   A0A1Q3FEQ0   A0A1B0FP18   A0A1A9X299   A0A1B0A839   A0A182H838   A0A1A9V167   A0A1B0BFJ2   A0A1A9X8Y5   A0A310SMP3   A0A0A1X737   A0A1W4WC55   E8NH79   Q29P77   B4GK89   A0A3B0KT64   A0A0K8V596   A0A3B0L0K6   B3MM96   B4NYD7   B4LRX1   B3N5P4   A0A0M3QTY5   B4KLB0   A0A2M4AEV2   W5JVC9   M9PDG3   P40798-2   P40798   M9PD57   A0A182PVX0   A0A0J9R264   A0A0J9R2N5   A0A182F3S3   A0A0P5VH86   B4HXM6   A0A0P5YM02   E9H0P6   A0A0P5XCR0   B4JAX9   A0A0P5A3Q8   A0A0P5AUP1   A0A0N8DCJ5   A0A0P5FMM2   A0A0P5LKS5   A0A0P4ZYX1   A0A162CCJ7   A0A0P5A851   A0A0P5SWI5   A0A0P5S2J5   A0A0N8EQ75   A0A0P5DJZ2   A0A084VMJ6   A0A0P6BDQ9   A0A0P5UQC7  

KEGG

101741751    K12236 transcriptional repressor NF-X1 | (RefSeq) protein shuttle craft

GO

GO:0005634   GO:0003700   GO:0008270   GO:0003676   GO:0006355   GO:0000981   GO:0000122   GO:0000977   GO:0003723   GO:0003677   GO:0005737   GO:0006402   GO:0046872   GO:0003824  

PANTHER

PTHR12360  

Subcellular location

Nucleus  

Length:

506

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00172

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01814

outside

1  -  506

 

 

Pi

169.893641

Theta

166.578405

Tajima's D

0.263486

CLR

0.691588

CSRT

0.444977751112444

Interpretation

Uncertain