SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09628  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012855
Annotation
PREDICTED:_uncharacterized_protein_LOC101737731_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.106
 

Sequence

CDS
ATGCCATCGTGTGTCGTGAAATGGTGTAAAAGCCATACAGATATGAAAAACAGTGGAATTAGCTTTCATAAATTTCCGACAAATGAAATTCAACGTAAAAAATGGATAACCGCAGTACGTTTGGAAAGAAATGAAACAAATTGGACGCCTTGCAAAAATAGCACAATATGCAGCATACACTTTCAAAAAGAGGACATGTACGCACTTGAAAATGGAAGTCGTGTGCGATTAAAAAAATCTGCGTTGCCCATTTGCACTATGGTTACTCCATTGAATGTACACTCAAATGACTTTTTGGAACCTTCATCTACCACGTGTACAACAAATTTGCAGAAAGAGTCCTCAGTGCCACGGGAAGATGTAAAAAATAAAGCTAATTTAAGGGAATTACATTCACCTAATTGTAGTAATATAGAACAAAGAAAAAGGAAATTGGAGAAAACAACTGATAAAGTAAATATTTGCAACAAAATGCATGAAAAAAATAATAAAGAACATGACCTTGAAGAGCCTGGTTGCAGCTACATGGAAGAAAAAAAGATTAAAAAGGTAGAATGTCCGAATTGTGAACATAAATTTTATATCGCGAATGAAATTTTGGAGAACAAAGCCAGTCTGTCGGCCTCAGAAAAATTAAAACCTTCATGCAGCACTCCGATAAGGCGTCACGTTAATGGATAA
Protein
MPSCVVKWCKSHTDMKNSGISFHKFPTNEIQRKKWITAVRLERNETNWTPCKNSTICSIHFQKEDMYALENGSRVRLKKSALPICTMVTPLNVHSNDFLEPSSTTCTTNLQKESSVPREDVKNKANLRELHSPNCSNIEQRKRKLEKTTDKVNICNKMHEKNNKEHDLEEPGCSYMEEKKIKKVECPNCEHKFYIANEILENKASLSASEKLKPSCSTPIRRHVNG

Summary

Pfam
PF05485   THAP        + More
PF12017   Tnp_P_element
Interpro
IPR038441   THAP_Znf_sf        + More
IPR021896   Transposase_37       
IPR006612   THAP_Znf       
IPR026519   THAP7       
Gene 3D
PDB
2D8R     E-value=0.00010652,     Score=105

Ontologies

Topology

Length:
226
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00045
Exp number, first 60 AAs:
0
Total prob of N-in:
0.15607
outside
1  -  226
 
 

Population Genetic Test Statistics

Pi
191.23813
Theta
204.733477
Tajima's D
0.622004
CLR
0.194999
CSRT
0.542772861356932
Interpretation
Uncertain
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