Silkworm Genome Informatics Database

Gene

KWMTBOMO09619

Pre Gene Modal

BGIBMGA012850

Annotation

putative_zinc_finger_protein_91-like_protein_[Operophtera_brumata]

Location

Bomo_Chr16(+):5670244-5671571 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Extracellular Reliability : 1.72 Nuclear Reliability : 2.355

CDS

ATGAGTAAGGTTAAACTGATCGATGTTTTAGTTTTCCTGAACTGTTTAGAGAATAATGACGAAGAGAATTGGCCACAAGGAATATGTTCGTCGTGTGTTTCTACAGCTTTGCATTCCTACAATTTCAAATTAAACTGTCTAAAAGCTAATGCAACCTTATCTCAAATGCTTATGATGCAATCTCTGACTAATCTTCACAGGACTGAAATAGAAAATATTGATATTAATGTTGTTTATCAAGATCATGAATATGATATTCCACTTTTCAATAACCATGCTTCATTAGACTTTGAACCATTCTCATCTAAAGAGTTAACGCCTTTACCTCCTGTTACTGTAATTAAATCAACTGAACAACCGCCTAAAAAAGAAAGTGAAAAAAAATACACATGTACAGTTTGCTCTAAGTCATTTACAAGAATATATGGTTTAAGGTATCACATGACTAAGCATGCTAATGTGAAAAGCTTCTTGTGTTCCAAATGTGGCAAAACATTTCACAACTCTGGATGCTTACGCCAACATCTCTTGAGCCACAGAGATATTGCTCAGTTCAAATGTGGTTTTTGCAACAAAACCTATAAATCAAGGCAGTCATTGAAAGAGCACTTTCGAGTCGCTCATTCGAGCAACAGTAAACTGTTTGTATGTGTTACATGTGGAAAACGATTTACAGCAAAATCAACTCTAGTCATGCACATGAAAAGTCATACTGGAGTAAAACAGTTTGCTTGCCCTAGTTGCCCTAAAGCTTACACCAGAGCTATTTATTTACGGGAACATAGCATAGTTCATACTGGCCAACAGAGACCAAAACCATTTAAATGTTCCAATAAAGACTGTGAAAGAAGCTTTGCCACCAAACATTCATTGTTGGTGCATTTTGCACACACTCACACGACAGAGAGACAGCACAAATGCACAACTTGTTTCAAAGGTTTTGCAACAGCCTCAGGCTTAAAAATGCATATGGAATCTCATGCCACTGTGGAGCTCCATTGCAATATATGCGGGAAGAAACTGTCAAATAAAAGAGTTCTTCAAAAACATATAAAAACTCATAATGTTGATGCCAATGACATGATATTGGAAACTGTTGTTGATAATACTTTCTTCGAACAAGTATTTGATGCAAATATGTAA

Protein

MSKVKLIDVLVFLNCLENNDEENWPQGICSSCVSTALHSYNFKLNCLKANATLSQMLMMQSLTNLHRTEIENIDINVVYQDHEYDIPLFNNHASLDFEPFSSKELTPLPPVTVIKSTEQPPKKESEKKYTCTVCSKSFTRIYGLRYHMTKHANVKSFLCSKCGKTFHNSGCLRQHLLSHRDIAQFKCGFCNKTYKSRQSLKEHFRVAHSSNSKLFVCVTCGKRFTAKSTLVMHMKSHTGVKQFACPSCPKAYTRAIYLREHSIVHTGQQRPKPFKCSNKDCERSFATKHSLLVHFAHTHTTERQHKCTTCFKGFATASGLKMHMESHATVELHCNICGKKLSNKRVLQKHIKTHNVDANDMILETVVDNTFFEQVFDANM

Uniprot

H9JTI8 A0A1E1WQN7 A0A3S2P1Y9 A0A2A4K0T5 A0A2H1V4K7 A0A0L7LS54 + More
A0A212FMK4 A0A0N0PDV1 A0A0N0PEZ9 A0A3P9HWD7 A0A3B3HND2 A0A3Q0S379 A0A3B3ULX3 A0A3Q3FQU9 A0A0R4IEV0 A0A3B3Y303 A0A146R045 H2LSP4 A0A3P9KKJ6

Pubmed

19121390 26227816 22118469 26354079 17554307 23594743 + More

EMBL

BABH01003717 GDQN01001719 JAT89335.1 RSAL01000051 RVE50287.1 NWSH01000320 + More
PCG77504.1 ODYU01000646 SOQ35773.1 JTDY01000205 KOB78305.1 AGBW02007651 OWR54978.1 KQ460208 KPJ16608.1 LADI01006439 KPJ20641.1 GCES01124651 JAQ61671.1

Proteomes

UP000005204 UP000283053 UP000218220 UP000037510 UP000007151 UP000053240 + More
UP000053268 UP000265200 UP000001038 UP000261340 UP000261500 UP000264800 UP000000437 UP000261480 UP000265180

PRIDE

H9JTI8

Pfam

PF05605   zf-Di19        + More
PF00096   zf-C2H2
PF07776   zf-AD

Interpro

IPR008598   Di19_Zn_binding_dom        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JTI8 A0A1E1WQN7 A0A3S2P1Y9 A0A2A4K0T5 A0A2H1V4K7 A0A0L7LS54 + More
A0A212FMK4 A0A0N0PDV1 A0A0N0PEZ9 A0A3P9HWD7 A0A3B3HND2 A0A3Q0S379 A0A3B3ULX3 A0A3Q3FQU9 A0A0R4IEV0 A0A3B3Y303 A0A146R045 H2LSP4 A0A3P9KKJ6

PDB

5WJQ E-value=6.10719e-25, Score=283

KEGG

101738536 no KO assigned | (RefSeq) gastrula zinc finger protein XlCGF57.1-like

GO

GO:0003676 GO:0005634 GO:0008270 GO:0045892 GO:0043565 GO:0045893 GO:0003700 GO:0045944 GO:0046872 GO:0016742 GO:0005737 GO:0006730 GO:0009258 GO:0016155 GO:0003824

Length:

380

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00101

Exp number, first 60 AAs:

0.00077

Total prob of N-in:

0.00793

outside

1 - 380

Pi

271.345088

Theta

205.122447

Tajima's D

1.00064

CLR

0

CSRT

0.659217039148043

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics