Gene

KWMTBOMO09428  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012776

Annotation

PREDICTED:_protein_FAM57A_[Bombyx_mori]

Location

Bomo_Chr16(+):1044217-1055414      View in EpiBrowser

Transcription factor

TRAM_LAG1_CLN8

Location in the cell

PlasmaMembrane   Reliability : 4.786

CDS

ATGGATCCAACATTTACTAAGCCCCAAAACCTTCGGCCAGCTATGTGGCTGTTATGCATTAGCAACGTGGCCTCACTCCTGGCTGCTCTCAACCTCGTCATCTGGCTGGAACCGGACGAGAGGATATCAATACCGCGAGGAAGTGCTTTAACAGTCCTGGGTCTGGTTTATTTCACGAGCCTGTTCGAGATCCTGAACGTGTGGGCTCTGTACACGGAGGCCGGCAGTCGGATCAGGCACCAGTACGCGCTGAGCCACGGAGACGTTTTGGACATCAACAACAAGCTGGTGTCTGCCGTCCAGGCGGTGTATTGCGTGGCGACGGGCGTGGTGGTGTGCAGCCACTCGTGCCGCCGCGACTTCATGCGCGCCTCCCACTACATGTCAGAGGCGTACGCGTGGTTCGGAGCCGCCTACTTCTTCTACGACATATGGTCCATGTACATGGTTCACATCCAGATGGTCTCCGGCGGGGAGTCGATGAAGGAGCAGGTCCGGAGGCGGGTGAGCGAGAGGAAGGCGCCGGTTTCGTTCCTCAAGTACTGCGCGCACGAGCCCGTCATACTGCTGCACCACGTCTTCATAGGGGGCTTCGGCTTCCTGGTCATTGTTCACCTGCGCGGCTCGCTGGGCGACTGCGCGTTCGGCTGGGTGTACGGCATGGAGGCGTCGACGCCGCTGGTGTGCGCGCGCGGCGTGCTGGCTCGCCTGCGCCTCAAGCGCTCGCCGCTCTACCTCGCCAACGGCCTGCTCATGCTGCTCACCTTCCTGCTGTGCCGCGTGCTGTCGCTGCCCTACGTGTGCTGGCTCTACAGCCGCGAGCTGGGACTCACCTACGCGCAGGCGATACAGTCGCTGCCGACGGGCTGCAAGATATCCATCTGCATCCTCCTGCTCCCGCAGCTGTACTGGTTCTACCTGATGTCCGCGGGGGCGCTGAAGATGCTGTTCCGCGCCGGCAAGCCCGCAGAGCTCGACGGCAAGGCGCCCCGGCCGACACCCCCGGCCGACAGGTCCGCCGGCGACGCGACCGAAGTGACCGACAAGCACAGTTGA

Protein

MDPTFTKPQNLRPAMWLLCISNVASLLAALNLVIWLEPDERISIPRGSALTVLGLVYFTSLFEILNVWALYTEAGSRIRHQYALSHGDVLDINNKLVSAVQAVYCVATGVVVCSHSCRRDFMRASHYMSEAYAWFGAAYFFYDIWSMYMVHIQMVSGGESMKEQVRRRVSERKAPVSFLKYCAHEPVILLHHVFIGGFGFLVIVHLRGSLGDCAFGWVYGMEASTPLVCARGVLARLRLKRSPLYLANGLLMLLTFLLCRVLSLPYVCWLYSRELGLTYAQAIQSLPTGCKISICILLLPQLYWFYLMSAGALKMLFRAGKPAELDGKAPRPTPPADRSAGDATEVTDKHS

Uniprot

H9JTB4   A0A2A4K2J8   A0A437BFA1   A0A194RSH8   A0A194Q0U5   D2A4Z1   + More
V5I996   A0A0T6B029   A0A0L7LRY8   A0A1L8DK35   A0A1L8DJT1   A0A1L8DJW2   Q17PW3   A0A023ESG1   A0A1S4HDU9   A0A1Q3FE42   A0A182PI93   B0W0M1   A0A182HFX7   A0A182VB23   B4PXI3   A0A182Q1B9   Q9V3S7   A0A0K8US37   B3NW34   B4R7J4   A0A034W2K1   A0A182TNH3   A0A182YEC0   B3MY19   B4MJB1   A0A0A1WQL9   B4JKQ9   A0A2P8Y1G1   A0A182M8H0   A0A182SYF7   A0A182RCZ3   A0A0M4EIN8   A0A182WDE2   B4L2F1   A0A3B0K0C8   B4MEE5   A0A182JJ18   A0A336M8X9   A0A182MXI7   A0A1B0DA96   A0A1J1HP75   A0A182JSX4   E0VUB8   A0A182X5H9   Q29II1   A0A084W3I9   A0A1B0CSU3   B4H2I2   A0A1D2NG18   A0A226F756   A0A1S3CVZ4   A0A226EIS5   A0A1D2MZ95   A0A3Q3EPE1   A0A402EMB0   K1R9G4   A0A437C9X4  

Pubmed

19121390    26354079    18362917    19820115    26227816    17510324    + More
24945155    12364791    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    25244985    25830018    29403074    18057021    20566863    15632085    24438588    27289101    22992520   

EMBL

BABH01004172    NWSH01000261    PCG77910.1    RSAL01000071    RVE49103.1    KQ459700    + More
KPJ20349.1    KQ459582    KPI98933.1    KQ971345    EFA05283.1    GALX01003320    JAB65146.1    LJIG01016367    KRT80815.1    JTDY01000224    KOB78207.1    GFDF01007374    JAV06710.1    GFDF01007372    JAV06712.1    GFDF01007373    JAV06711.1    CH477188    EAT48831.1    GAPW01001416    JAC12182.1    AAAB01008816    GFDL01009212    JAV25833.1    DS231818    EDS41323.1    APCN01005436    CM000162    EDX02934.1    AXCN02001714    AF181646    AE014298    AAD55432.1    AAF46579.1    GDHF01022800    JAI29514.1    CH954180    EDV46167.1    CM000366    EDX17553.1    GAKP01009161    JAC49791.1    CH902630    EDV38634.1    CH963738    EDW72200.2    GBXI01012973    JAD01319.1    CH916370    EDW00162.1    PYGN01001050    PSN38095.1    AXCM01008583    CP012528    ALC48804.1    CH933810    EDW06827.1    KRF93830.1    OUUW01000003    SPP78461.1    CH940664    EDW62920.1    KRF80855.1    UFQT01000258    SSX22498.1    AJVK01013239    CVRI01000014    CRK89755.1    DS235784    EEB16974.1    CH379063    EAL32672.2    ATLV01020054    KE525293    KFB44783.1    AJWK01026607    CH479204    EDW30549.1    LJIJ01000051    ODN04213.1    LNIX01000001    OXA65160.1    LNIX01000003    OXA57585.1    LJIJ01000363    ODM98332.1    BDOT01000024    GCF45299.1    JH817988    EKC30591.1    CM012455    RVE59572.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007266    + More
UP000037510    UP000008820    UP000075885    UP000002320    UP000075840    UP000075903    UP000002282    UP000075886    UP000000803    UP000008711    UP000000304    UP000075902    UP000076408    UP000007801    UP000007798    UP000001070    UP000245037    UP000075883    UP000075901    UP000075900    UP000092553    UP000075920    UP000009192    UP000268350    UP000008792    UP000075880    UP000075884    UP000092462    UP000183832    UP000075881    UP000009046    UP000076407    UP000001819    UP000030765    UP000092461    UP000008744    UP000094527    UP000198287    UP000079169    UP000261660    UP000288954    UP000005408   

PRIDE

H9JTB4    Q9V3S7   

Pfam

PF03798   TRAM_LAG1_CLN8        + More
PF00245   Alk_phosphatase
PF13871   Helicase_C_4
PF13872   AAA_34

Interpro

IPR006634   TLC-dom        + More
IPR017850   Alkaline_phosphatase_core_sf       
IPR001952   Alkaline_phosphatase       
IPR026741   SNO       
IPR027417   P-loop_NTPase       
IPR039187   SNO_AAA       
IPR026937   SBNO_Helicase_C_dom       

SUPFAM

SSF53649   SSF53649        + More
SSF52540   SSF52540       

Gene 3D

3.40.720.10    

ProteinModelPortal

H9JTB4   A0A2A4K2J8   A0A437BFA1   A0A194RSH8   A0A194Q0U5   D2A4Z1   + More
V5I996   A0A0T6B029   A0A0L7LRY8   A0A1L8DK35   A0A1L8DJT1   A0A1L8DJW2   Q17PW3   A0A023ESG1   A0A1S4HDU9   A0A1Q3FE42   A0A182PI93   B0W0M1   A0A182HFX7   A0A182VB23   B4PXI3   A0A182Q1B9   Q9V3S7   A0A0K8US37   B3NW34   B4R7J4   A0A034W2K1   A0A182TNH3   A0A182YEC0   B3MY19   B4MJB1   A0A0A1WQL9   B4JKQ9   A0A2P8Y1G1   A0A182M8H0   A0A182SYF7   A0A182RCZ3   A0A0M4EIN8   A0A182WDE2   B4L2F1   A0A3B0K0C8   B4MEE5   A0A182JJ18   A0A336M8X9   A0A182MXI7   A0A1B0DA96   A0A1J1HP75   A0A182JSX4   E0VUB8   A0A182X5H9   Q29II1   A0A084W3I9   A0A1B0CSU3   B4H2I2   A0A1D2NG18   A0A226F756   A0A1S3CVZ4   A0A226EIS5   A0A1D2MZ95   A0A3Q3EPE1   A0A402EMB0   K1R9G4   A0A437C9X4  

KEGG

101740419    no KO assigned | (RefSeq) protein FAM57A

GO

GO:0016021   GO:0016791   GO:0006355   GO:0005524   GO:0006508   GO:0015074   GO:0004672   GO:0006468   GO:0006418   GO:0000049   GO:0016876  

PANTHER

PTHR11596   PTHR12706  

Length:

351

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

158.37534

Exp number, first 60 AAs:

34.76826

Total prob of N-in:

0.54386

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  49

TMhelix

50  -  72

inside

73  -  130

TMhelix

131  -  153

outside

154  -  186

TMhelix

187  -  206

inside

207  -  212

TMhelix

213  -  235

outside

236  -  249

TMhelix

250  -  272

inside

273  -  284

TMhelix

285  -  307

outside

308  -  351

 

 

Pi

264.723344

Theta

180.263957

Tajima's D

1.982814

CLR

0.180533

CSRT

0.878806059697015

Interpretation

Uncertain