Silkworm Genome Informatics Database

Gene

KWMTBOMO09382

Pre Gene Modal

BGIBMGA012757

Annotation

PREDICTED:_zinc_finger_protein_316-like_[Papilio_polytes]

Location

Bomo_Chr16(+):254876-262143 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Extracellular Reliability : 1.952 Nuclear Reliability : 2.248

CDS

ATGGTAACTATGGACGAGTTAAAGTTAGAAATTGTAGCGGACTCGTGCTGTGTGTGTGGAAATGTTAGCGACTTGCAGTCGCCAGAAGAATATGACACGGAAGCTCCACCGGGACAAACGCCGCTGAGGATGATGCTACTACATCTTAACAACAACAAGGTAGTACCTGAAGGTCGACTGTGCTCAAGCTGTATCCAACGTACACTAGAAGCTTATGAATTCAGTACTGCACTCTCCTCAAGTGGAGTACCGCCTCTTAGTGAGAAGATCAGATCACTCAGGAGAAAACTTCATGAACTCACACAGAAAATAGATGTCTTCATAGTAGTGGGAGGTTCTAGCTTAGCATCTGGAGGATGTTACAATGAAGAAGACATCATCATGGTTGACAAAGCAGCCTTGGCAGCTGCTGCTAAAGCTGATGATGAGGAGTTGGAAAGGGCCAGAAATGCAAGAGGAGATACTGTATATCAGTGTACAGTTTGTCCAGCTTCATTTCAACGTGTGAGCGAGTACCGCACTCACGTGGAGTCTCACGGCAGGGCAGCGTCACACGCGTGCTGGACGTGCGGGGCACAGTTCGCGACGCGCACCGCTCTTCACGATCATCTGGCTTCTCACGCCGATACCACTGACAACACTTGCTATGTCTGCGGGACTACATTCCAGCGGCAGTCGGAGCTGCGTCGGCACGAGGCGGCGTGCGCGTGCCGGTGCCCGTCGTGCGGCGCCGAGCTGGCGGACCGCGCGGCGCTGTCGGCGCACGCGGCGGCGGCGCACGGCGTGACGTCACGCGGCCGCCCGCTGTGCCCGTGCTGCTTCCGCTCCTTCCCGGACGGGGAGCTGCTGGCCGCGCACCTGCTGCGGCACCGGCAGGCCAAGCAGTTCGTCTGCGGATACGACTCGTGCATCCTTCGGTTTGCGGCCAGGTTCGGTTCCGTGGCGGCCATGAAACGTCACGCGCGCGTGCACCGCGACGACCGCGCCTCCCCGGACCTGAAGGACGAGTTGGGTGCCGAGTCCCAGGAGGAGGGCGACGAAGGCGAGGTGGAGTACCTCGAAGTGGAGACCCTGGAGGACGGAGAGGTCGACGAGAGTGTGCAGTGA

Protein

MVTMDELKLEIVADSCCVCGNVSDLQSPEEYDTEAPPGQTPLRMMLLHLNNNKVVPEGRLCSSCIQRTLEAYEFSTALSSSGVPPLSEKIRSLRRKLHELTQKIDVFIVVGGSSLASGGCYNEEDIIMVDKAALAAAAKADDEELERARNARGDTVYQCTVCPASFQRVSEYRTHVESHGRAASHACWTCGAQFATRTALHDHLASHADTTDNTCYVCGTTFQRQSELRRHEAACACRCPSCGAELADRAALSAHAAAAHGVTSRGRPLCPCCFRSFPDGELLAAHLLRHRQAKQFVCGYDSCILRFAARFGSVAAMKRHARVHRDDRASPDLKDELGAESQEEGDEGEVEYLEVETLEDGEVDESVQ

Uniprot

A0A0N1PGN0 A0A194Q091 S4PDB0 A0A212FM68

Pubmed

26354079 23622113 22118469

EMBL

KQ460635 KPJ13427.1 KQ459582 KPI98976.1 GAIX01003736 JAA88824.1 + More
AGBW02007654 OWR54854.1

Proteomes

UP000053240 UP000053268 UP000007151

Pfam

PF00096 zf-C2H2

Interpro

IPR013087 Znf_C2H2_type + More
IPR036236 Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A0N1PGN0 A0A194Q091 S4PDB0 A0A212FM68

PDB

3W5K E-value=1.63661e-07, Score=132

KEGG

101735885 no KO assigned | (RefSeq) uncharacterized LOC101735885

GO

GO:0003676 GO:0046872 GO:0008289 GO:0016849 GO:0004672 GO:0005524 GO:0006468 GO:0006418 GO:0000049 GO:0016876

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01318

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00701

outside

1 - 368

Pi

321.152173

Theta

21.592214

Tajima's D

-1.803242

CLR

1.473657

CSRT

0.0263986800659967

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics