Silkworm Genome Informatics Database

Gene

KWMTBOMO09364

Pre Gene Modal

BGIBMGA002189

Annotation

PREDICTED:_zinc_finger_protein_98-like_[Bombyx_mori]

Location

Bomo_Chr15(+):18171465-18180098 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.826

CDS

ATGGCCGAAAAAAGTGCAATGAACTCTCTGATGGAAGTGGAGCATTTTAATTCCTCGTCCGTGGACGTGGGCATCAAGAAGGAGGTTGTAGTGAAGCCGGAACCTTATCAGGCTGAAATAGAATATGTTAAGCTAAAAGAGGCATTTGAAGCAATAATAAGTAAAAACCCTCTATTTGTGTCATCAAATGTGCCTTTAAAATTAACTACTGTAAAGGCTGAGTACAATGATGATGAAGATGATGATGATGATGATGATGACGATGATGTGTCGGTACATTTTAATAATTTAGAAGAGGATTCTGAAGATGAGCCATTAGTAAAGTGTAAGAGGAAAAGAAAAGTCCAGGTTAAGAAAAATTGTACAACTGCTAAACATACACCTAATAGCAAAAAATTTGAGGGAAGCTGGAAATGTGAATTATGCGGTGAGACTGGAGATAAAGGTGGTACTAATGCTGAAGAAGCTCACAGATTATCAGTACACTCTGGTATGAATTCAGGGAATAATGGAGCTTTTAATGATGTCAAGACTGAAGATTCAGCTGATGGTTCAGAAAGTCCATTTAAATACACATTTAAGGAATCGCTCCTCTTGGCACTTGGTAATCTGGATGAATCTAGTAAAGGAGATGAAAAAATAAAAAAGAAAAAAACTAAAGCAACACGGAAGAAAAAGAAAGTATTAAAAGACACAAAAACGAAAGTAATGCATCAGTGTGATCAGTGTACTAACAGGTATACTTCCTTAGTACGTTTGGAGCGTCACAAACAAATTAAACATGAAGGTTCGAAGCCTCCTTACATCTGTGAGATATGTGGCGCGCACTACAAACACAAGCGAGCCTGCGACATACACATAGCTCTACACAAGGGTATAAGCGATTGGAAATGTGAAGAGTGCAATAAACTGTTTCCTTCAAAGAATGCACTCCAGAGGCATAACAACATCCACACGGGGAAGCTCAACTATCAGTGCGACCTGTGCGGCAAGTCCTTCATCCACACGTCGTCGTTCAAGATGCACAAGCTCTCGCACTCCGGCGTGAAGCCGCACTCGTGCGACGTGTGCGGGCTGGCGCTCATGACGCGCTCGCACCTCAAGCGACACAAGCGCGTGCACAGCGGCGAGAAGCGCCACGAGTGCGCGCTCTGCGGGAAGCGCTTCTCGGAGAGGTACAACCTCATGGCGCACGCCAAATCGCACCACGGGCCCGAGGCGCGCGCCGCCGAGCCGCCGCGCCCCGAGCGCCGCCGCCTCTTCCGCTGCCACTTCTGTCCCGAGAGATACGAGAGACGGTACATGCTGGAGCGGCACATGCCGGCGGCGCACGGGCGCACGCTGGAGCGGCCGCCGCCCACGCCGCGGAACACCATGAGCAAGATGCTGAAGGCGCAGGCGCTCGGCAAGCGCGCCGCCCCGCCCGACAGCAACGACCCGGAGAGCAAGGAGGAGCGCAGCCCGCAGTCGCGCGGCGCCACCCCCGCCCCCCTGGCGGCCCCCTCGCCGGCCCTGCTGGCGGCGGCGACGTGGTCGGGCGCGTACGCCGCGGAGTTCGGCATCCGGCCCGACTTCCCGCACTGA

Protein

MAEKSAMNSLMEVEHFNSSSVDVGIKKEVVVKPEPYQAEIEYVKLKEAFEAIISKNPLFVSSNVPLKLTTVKAEYNDDEDDDDDDDDDDVSVHFNNLEEDSEDEPLVKCKRKRKVQVKKNCTTAKHTPNSKKFEGSWKCELCGETGDKGGTNAEEAHRLSVHSGMNSGNNGAFNDVKTEDSADGSESPFKYTFKESLLLALGNLDESSKGDEKIKKKKTKATRKKKKVLKDTKTKVMHQCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHHGPEARAAEPPRPERRRLFRCHFCPERYERRYMLERHMPAAHGRTLERPPPTPRNTMSKMLKAQALGKRAAPPDSNDPESKEERSPQSRGATPAPLAAPSPALLAAATWSGAYAAEFGIRPDFPH

Uniprot

H9IY56 A0A2W1BQC2 A0A2H1WBD6 A0A437B6W4 A0A0N1PH69 A0A194Q0S1 + More

Pubmed

19121390 28756777 26354079

EMBL

BABH01029850 BABH01029851 KZ149955 PZC76491.1 ODYU01007522 SOQ50370.1 + More
RSAL01000141 RVE46074.1 KQ461033 KPJ09982.1 KQ459581 KPI99151.1

Proteomes

UP000005204 UP000283053 UP000053240 UP000053268

PRIDE

H9IY56

Pfam

PF00096 zf-C2H2

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9IY56 A0A2W1BQC2 A0A2H1WBD6 A0A437B6W4 A0A0N1PH69 A0A194Q0S1 + More

PDB

5WJQ E-value=8.36407e-24, Score=275

KEGG

101737718 no KO assigned | (RefSeq) zinc finger protein 98-like

GO

GO:0003676 GO:0046872 GO:0007156 GO:0006412 GO:0005200 GO:0004812 GO:0006418 GO:0000049 GO:0016876

Length:

527

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07803

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00179

outside

1 - 527

Pi

178.83216

Theta

157.47112

Tajima's D

0.503338

CLR

0.167458

CSRT

0.515224238788061

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics