Silkworm Genome Informatics Database

Gene

KWMTBOMO08863

Pre Gene Modal

BGIBMGA007843

Annotation

PREDICTED:_zinc_finger_protein_675-like_[Papilio_xuthus]

Location

Bomo_Chr15(-):6720063-6722005 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.748

CDS

ATGTCTAAAAGGGATCAAGAAAGTAGTGATAAGAAGTTGGATACGAGTGACTATGAAAACCTCATATCGCATCACAGTATATTTGAATCAAGCCGAAGTAAACAAGAACTGCCAAGTTTCCCTGGATACTCAAATGCAGAAACGCAAACAAAACCTAGTGACATAAAAGGGCAAAATGCAGTACAGTCAGGACTGGGGGTGTGGCACTACAATCCATGGTGGATGCTTGCCAGTACATCTCGAAACACACCAGATCAAGATGAATTTGCAGAGAACTCAGATCAAGCTAAAGTCAAGCAGGAACCCTCTGGAGCATGTTCCCCCGAACATGATCCTTTACAAAATGAACTAGAGCAATTTCAGGCAGGTACTTCCACACCTCCAGTAGGGATAGATACTTTTTGTGACGATTGCTCAGATCCATTTTGTGACTCTAGCGCAGCAGTTTGCCGCAAGCTATTTCATTGCCCTCATTGTAGAAAAAGTTATCCAACAATATTGGAGTTCAATACCCACTTGACAGGTGTTCATCCATCACAAAAACCATTCAGATGCCAAATATGCCTTGAGCCATTTCATAAAAAATCACATCTCAGAAGGCACCTGGATGCTCTTCATACTCGTAAGGATGTAAACAAGTGTTCAGTGTGTTCAAAGTATATTAAAGATAAGAGCAATTTACGTAAGCATATGCAGGTCCATACAGGCCGAGTACCTCAAAAACAGTTCAAATGTGACTTGTGCAATAACAAACGTTACATGTCTCTAGATAGACTCAATAACCACAAAGTGGTGTGTACTGGAGAAAAAGTATTGAAGTACTGCGACATGTGCAGTAAAGTCTTTGATAACTCCAGGTCCTTGAACAGTCACAGAAAAGTGCATGCTAGAGAATTGAAGTGTGAAAATTGTGGTGAACAATTACGTTCATTAGAACAGTTCACAACTCACAAAATGGTGTGTTTGATAACATCTGAAACCAGTGGTGCCCAAGGTAGTAGTACTACTTCATCAAACACTGCAACGACATCCTCAATGAATCGCTGTTGTCAACAACCAGGATTGTGTGAACATGACAAACCTGCTTATCTTAACATACCTGGTTATGCAGCTGGTAGGGTACTTGATGCAACTCTCTCATCTTTAAAGTCAGAACTGAATTGA

Protein

MSKRDQESSDKKLDTSDYENLISHHSIFESSRSKQELPSFPGYSNAETQTKPSDIKGQNAVQSGLGVWHYNPWWMLASTSRNTPDQDEFAENSDQAKVKQEPSGACSPEHDPLQNELEQFQAGTSTPPVGIDTFCDDCSDPFCDSSAAVCRKLFHCPHCRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLDALHTRKDVNKCSVCSKYIKDKSNLRKHMQVHTGRVPQKQFKCDLCNNKRYMSLDRLNNHKVVCTGEKVLKYCDMCSKVFDNSRSLNSHRKVHARELKCENCGEQLRSLEQFTTHKMVCLITSETSGAQGSSTTSSNTATTSSMNRCCQQPGLCEHDKPAYLNIPGYAAGRVLDATLSSLKSELN

Uniprot

H9JE96 A0A2A4K196 A0A1E1WN27 A0A194RHZ3 A0A194PKG7 A0A2H1WG01 + More
A0A0L7L4C5 A0A212FHA1

Pubmed

19121390 26354079 26227816 22118469

EMBL

BABH01002784 NWSH01000248 PCG78045.1 GDQN01002625 JAT88429.1 KQ460367 + More
KPJ15561.1 KQ459602 KPI93224.1 ODYU01008424 SOQ52010.1 JTDY01003005 KOB70327.1 AGBW02008520 OWR53109.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000037510 UP000007151 + More

PRIDE

H9JE96

Pfam

PF00096 zf-C2H2

Interpro

IPR013087 Znf_C2H2_type + More
IPR036236 Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JE96 A0A2A4K196 A0A1E1WN27 A0A194RHZ3 A0A194PKG7 A0A2H1WG01 + More
A0A0L7L4C5 A0A212FHA1

PDB

2I13 E-value=9.30636e-13, Score=178

KEGG

101735611 no KO assigned | (RefSeq) zinc finger protein 431-like

GO

GO:0003676 GO:0046872 GO:0016491 GO:0008270 GO:0015074 GO:0016817 GO:0043565 GO:0016876 GO:0043039

Length:

387

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00151

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.02697

outside

1 - 387

Pi

244.862702

Theta

205.727799

Tajima's D

0.611282

CLR

0

CSRT

0.545672716364182

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics