Gene

KWMTBOMO08847

Pre Gene Modal

BGIBMGA007704

Annotation

PREDICTED:_zinc_finger_protein_271-like_[Amyelois_transitella]

Location

Bomo_Chr15(+):6413288-6415528      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.107

CDS

ATGGAAGATTCCTTTATTATAGCCAATTTTAATTCTCTGTGTCGCCTTTGCCTCGGTAAAAGTAGACTCGCCATCTCAATATTCGGAGCTGCACCTGATGACATTAATAACGTATCATTGACCTCCAAAATAGCTGAATGTTTTGAGTTACAGATCGATCCTAATGATGGTTTACCTGGCAGGATTTGTTACAAGTGCTTATTCAAAGTGGACAAGTGTTCAAAATTCAAATTACAATGTATCCAAAGTGAAAACAGACTCAGACAAATCACAAATCGTATAAATGAAGTAGATACTTCAAACTCATCTGAAATTACTAATTACACATACAGCAATTCCCAAGATGAACAGAAACATAAGCCTGAAGATTTTATTGTTGAAGATAGCGTTGTGATGGTGGTTGATCCTAGTCTTGATTATGATTCTTCGGATGATTCTGAAAATGTAGAAACTGTGGAGCAAGAAAATACTGATCGAGGCAATACTCCTGATGCGGATGCAATTCCGGAAACATTTTTCAAGAATGTTTCAATGTGCCAATATTGTGATCAAGCTTTCATTTCACAAGAAAAATGTAAAGAGCATGAACTAAACTATCATGATCCAGACATGCCTTTTAAATGTTATGAATGCAGTTTGGCTTTTGTGGAAAGAAATCAGTATGTACAGCATACGAAACATGTCCATGGAAATGACAAGCCCTATCATTGCCCTGAATGTAATAAATGTTTTGGACGAAGATCTGATCTAAGAAAACATTCTATTGTACATACAGGTATCAGACCTTACCAGTGTCAATTTTGCTTGAAGAGTTTTTCACGTAACACAAACTTGAGCAAACACTTGAGAATACACGCTGGTCACAGACCTCATGTTTGCCCTCTGTGCCCTCGTAGCTTTGTAGCCAAAGGTGACCTACAACGACATGTTCTTGTTCATTCTGGCATGAAGCCTTATTCGTGCAGAAAATGTCCCTCTACATTTGGACGAAGAGATAAGCTCATTAAACATGAACTAAAACATGGAATTGTTGCCACTGAGGATAAACCTGAAGACTATGCCAACAGTGTTAAACAGGATCCAAATGACATTGTTGTCAGTGTCAATCCTTTCAGTAACCTCATGACTTCTCCAACACAAAATTCAGATCCTTCAAACCCTACTTACGAACTTCCTAGTGTTCCTGACCATATTTCTGGGGAAAGTAGTTTTATAAAGATGCAAAAAGATCCCTCCACATCACATAAACAACAAAACTCATCACCAAAAAAGGCTACACCAGTTAAGAACAGACCAAAAAACATAAAATGCCATCACTGCACAAAAAAGTTTTCTTCCCTAGATGCATACAAAACTCATGTTTCAATTGCTCATATGGGATCAAGAGGATTTCAATGTAAAATATGTTTTAAGAAATTTTCCAAAAAAAGGGAGTTAGATCGACATGCTCCAATTCACACTGGAGGTAAACAATTAGCTTGTGACCACTGTGATAAAAAGTTTACTAAAAAAGACAAATTTGATAAACACAAACAGTCACAGGAATGTTTGGTTGTGAATATGCCTTGTATAGAGTGTGGTGTTACCTTTGAAAAGAAAGCTGACTTGGTTGCACATATTAAATCACACTTCAATGATACCTATGATAAGTTACAGATTCCAGATGTTGAGATTAAAGTAGAGAAAGATCCAGAAATACCATGTGATGAAAACTATTATGATTTGGGAACATGA

Protein

MEDSFIIANFNSLCRLCLGKSRLAISIFGAAPDDINNVSLTSKIAECFELQIDPNDGLPGRICYKCLFKVDKCSKFKLQCIQSENRLRQITNRINEVDTSNSSEITNYTYSNSQDEQKHKPEDFIVEDSVVMVVDPSLDYDSSDDSENVETVEQENTDRGNTPDADAIPETFFKNVSMCQYCDQAFISQEKCKEHELNYHDPDMPFKCYECSLAFVERNQYVQHTKHVHGNDKPYHCPECNKCFGRRSDLRKHSIVHTGIRPYQCQFCLKSFSRNTNLSKHLRIHAGHRPHVCPLCPRSFVAKGDLQRHVLVHSGMKPYSCRKCPSTFGRRDKLIKHELKHGIVATEDKPEDYANSVKQDPNDIVVSVNPFSNLMTSPTQNSDPSNPTYELPSVPDHISGESSFIKMQKDPSTSHKQQNSSPKKATPVKNRPKNIKCHHCTKKFSSLDAYKTHVSIAHMGSRGFQCKICFKKFSKKRELDRHAPIHTGGKQLACDHCDKKFTKKDKFDKHKQSQECLVVNMPCIECGVTFEKKADLVAHIKSHFNDTYDKLQIPDVEIKVEKDPEIPCDENYYDLGT

Uniprot

A0A2A4JC60   A0A437AZ73   A0A1E1WN01   A0A212F4D3   A0A194RCL0   A0A1E1WFY6   + More
A0A194PWP9   A0A1E1W3Q5   A0A1Y1KX68   A0A139WB13   A0A0T6B3Y5   A0A1W4WA17   A0A1B0D1P1   A0A1B0CF07   A0A1L8DBI5   A0A1L8DIM3   A0A1S4FUN0   Q16NQ1   A0A182GT58   A0A034W7U5   A0A0K8WAN9   W8C9P2   A0A182XDK1   A0A1J1HSF1   A0A0L0C9F2   A0A1I8NVB2   A0A1B0FNZ2   A0A182SV01   Q7QGB5   A0A1A9UGP8   A0A069DVN9   A0A1B0B2S0   A0A1A9XF73   A0A1A9WFY8  

Pubmed

22118469    26354079    28004739    18362917    19820115    17510324    + More
26483478    25348373    24495485    26108605    12364791    26334808   

EMBL

NWSH01002160    PCG69022.1    RSAL01000249    RVE43500.1    GDQN01002690    JAT88364.1    + More
AGBW02010386    OWR48590.1    KQ460367    KPJ15573.1    GDQN01005217    JAT85837.1    KQ459596    KPI95560.1    GDQN01009454    JAT81600.1    GEZM01075749    JAV63986.1    KQ971379    KYB25096.1    LJIG01009953    KRT82050.1    AJVK01010349    AJWK01009493    GFDF01010263    JAV03821.1    GFDF01007755    JAV06329.1    CH477813    EAT35982.1    JXUM01086437    KQ563566    KXJ73653.1    GAKP01007306    JAC51646.1    GDHF01004190    JAI48124.1    GAMC01001994    JAC04562.1    CVRI01000020    CRK90933.1    JRES01000824    KNC28069.1    CCAG010015610    AAAB01008835    EAA05805.4    GBGD01001023    JAC87866.1    JXJN01007691   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    UP000007266    + More
UP000192223    UP000092462    UP000092461    UP000008820    UP000069940    UP000249989    UP000076407    UP000183832    UP000037069    UP000095300    UP000092444    UP000075901    UP000007062    UP000078200    UP000092460    UP000092443    UP000091820   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2

Interpro

IPR012934   Znf_AD        + More
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR039705   REPIN1       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A2A4JC60   A0A437AZ73   A0A1E1WN01   A0A212F4D3   A0A194RCL0   A0A1E1WFY6   + More
A0A194PWP9   A0A1E1W3Q5   A0A1Y1KX68   A0A139WB13   A0A0T6B3Y5   A0A1W4WA17   A0A1B0D1P1   A0A1B0CF07   A0A1L8DBI5   A0A1L8DIM3   A0A1S4FUN0   Q16NQ1   A0A182GT58   A0A034W7U5   A0A0K8WAN9   W8C9P2   A0A182XDK1   A0A1J1HSF1   A0A0L0C9F2   A0A1I8NVB2   A0A1B0FNZ2   A0A182SV01   Q7QGB5   A0A1A9UGP8   A0A069DVN9   A0A1B0B2S0   A0A1A9XF73   A0A1A9WFY8  

PDB

2I13     E-value=1.34983e-28,     Score=316

KEGG

101743317    no KO assigned | (RefSeq) zinc finger protein 436-like

GO

GO:0005634   GO:0008270   GO:0003676   GO:0003677   GO:0046872   GO:0015074   GO:0016817   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR24406:SF10  

Length:

577

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00425

Exp number, first 60 AAs:

0.00425

Total prob of N-in:

0.00051

outside

1  -  577

 

 

Pi

3.706203

Theta

4.134324

Tajima's D

-0.627046

CLR

1995.859628

CSRT

0.217839108044598

Interpretation

Possibly Positive selection