Silkworm Genome Informatics Database

Gene

KWMTBOMO08720

Annotation

PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]

Location

Bomo_Chr15(+):3491105-3496634 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.523

CDS

ATGGCTGCATCTCAATCATCCGGCCCCAAACGGCCCTCTATTCAAGCCCAAGTTGCCCCTCCCCCGAGGTCGGGGGGTCGTGCCCAGGTGGACTTACGCCGTCACCCACCAATTGTAGTGGAGGCCCTCCCTAATTGGCCTCGCCATATGGCGGCCATTAGGGAGCGACTCGGCAGAGCTCCCTCGGGGCGACCCTACGGCGCCGGGTTCCTATTTCTCCCGTCATCGATCGAGGAGTACAGGGAGGTCCAGGCCTACCTATCGGAGGTCTCTGCCAGGGACAGTGCCATTAAATGGTACTGTTACGCCCTGGCGGAGGACATTCCTTCGAAGGTAGTTGTTCGGGGCCTCCCTGTCGATACCGATGCGGCCGACGTAACCCAGGCCCTAAGAGAGCTGGGCTTCCCGGCCCGGCATGCCCGATGTATCGAGGCCAGGAGGGGTAGGCCAGGCTGCGTGTTTTTCGTGGCCTTGGACCACCTCTCCAAGGACGACCTCGCCCGCTTGTACGCAGTTGAAGAGCTGCTGTACTTGCCGGGGGTGTCAGTGGAGGGATGGCGTACAAGTCGAGGGCCTGCGCAATGTCATCGTTGCCAGGCCTTTGGGCACGCATCCTCCAACTGCCACCGCGCGGTCCGCTGCGTTAGATGTGCTGAAGAACACGTAGTAGCGGACTGCCCGAGGCCGAGGGATGGCCCGTTTTCTTGCGCCAACTGCGGAAGGGACCACACTGCCGTCGACAGACGGTGCCCGGTCTTCCGCAGAAGGGCAAGGATGATGGGAGTCACCATTCCCCCTCCGGTACCTCGGGCCCCACGGGCCGAATTGCATCCGGCTCCGGTACTCCCGTCCTCATCTCAAGCTCCTAAGGGGAAGGGGAAAGGGAAAGGGAAATCCTCCCAGCCCCAACCCCCTCCCCAGTCCTTGATCATCCACCCAGCCGTTGTGGTAGAGGCCAAGCCGTCAGCGGCAACGCTGATGGCAGAAGCCAATACTCCGCGGCAGGGTCCTAAACCTCAACCTGCCCCCCGCAGTACTGTCGCTGCCAGTCTTTCACAGCCAGTAAAACAAAACCAAAAGGCCCTAAAAAATAAATTAAAGAACAGGAAGAAAAAAGAAAGAAGAAAGCTCCAAAAACAATTACTTGTAGCTGAAGTCCTCCCTCTATCTGCACCAATTGCACCAAATTCTACGACTATGGAGGTCGATATTAATCCTTCCCAAACGATTGAGAACCAAGCCAACGATCCATTGCCTGAGCCTGGGGAAATTTTGCCTCAGACCCAGCCGGATACATCTCAGCCCCCTCTTCCCCCCCGCCCTCAGCGCGAGCGGCGCAGCGGTCGTTCAATGGCTAGCCAGGAACTGCGCATCATTTATTGGAACCCCGGCGGGGTAAAAACCCGCAAGAACGATCTCTTGGTTCTCGCCCGGGAGTACAACCCTGAGGTTGTGCTCCTGGGCGAGACCAAGCTACGTCCTCGGGATGTGTTCAGGATTCCAAACTACTTCATGTACCGACGTGACGAGGTGAGTCCTGCTGGGACGCCGTTCAGGGGCACTGCGGCGCTCGTCAGGCGAGACGTGGTGCATGATCAGTTGGATTTGTTGGCCTTCACATCGACAAGGTCGATCGGTGTGAGGATCCACACCTCGGGGGGAGATATGCGGGTTTATGCCGCGTATAGACCCCCGGGGCCTGATTTCCACCCCGGGGACATAAGACGGGTCCTGAATTGCGACAGCCGCCCAGCTCTGCTGGTCGGGGACCTCAACGCGAAGCACGTCGCGTGGGGCTCCCGACTGAACTCAGCAGTGGGCAGGCGGCTGTTAGAAGATGCCGATAGGGGCGACTACTCTGTGGTCGGCCCCGACGAACCCACGCACATTCCGACCGCCGCGCAACTCCAGCCCGACGTGTTGGATGTGTGCGTTCATAAGGGGCTACGGTGCCCCTTAACTATTGAGGCACTGTACGACCTGGGTACCCCCCATCTCCCTATCCTGGTCACACTGGGAATGGGGCTTACCCGGGTTGCGACCTCGCCCCTACGACCGAAGGTCGACTGGGAGCTCTTTAAGAGACTCCTAGTTGACCTTCCCGTAATTCAGGACCCCAACACCCCTGAGGGGGTCGACGACGCGGCAGTCCGCCTTGTCGACTCCATCAGGGGAGCGATCGACCAGGCAACGACTCTTGTGCCCAGCGGCGGGCCCAGAGGTATACTCCCGGCCCATCTGAAAGCGATTATTCGCCGGAAGAGGGGCCTGAGGAGGCTCTGGGCGACAACTCGTTGTCCCAGGATCAAGCGCGAGCTTAATGAGCTGGAAGCGGAGTTGGCGGCGAAGATTAGCTCCTATCGGGGCTATGCGTGGGAGGAACGGATCGAGGAGGCCCGTGAGGACCCCTCGTCCGTGTCCCTCCACCGACTTTGCCGCCAGCTCTCAAATCGGCCTGCCCCGACTTGTCCACTCGTGGACGAGAGGGGCAACCGATGCTTCTCGGCTCAGGCCCGCGCCGATGTCCTGGCCGTAATGCTGGAGCGGCAGTTCGCTCCAAATAACTCTGCACCCTCAGAGGCCGCATTCCACCAATCGGTGGAAGAGAGCGTAGCAAGCCTACTCTCCTCCCCGGTGCCACCGTTGGGAGATGGTGATTTCATCACTCCCAGTGAATTGCGCCTCTCCATCAAGCGGATGAAGAGGCGCAAGGCGCCGGGCGAGGACGGTATTCCCTCCCTCGCATTTTTCCACTTCCCCGAAACGGTCGTGTCATTCATGACACGACTGTTCAATTCCATTCTGTCCACAGGACACTTCCCGGGAACTTGGAAATTGGGTAAGGTTATTGCCCTGCCCAAACCCGGCAAGGATAGGAGAAATCCCTCCAGTTATCGTCCGATCACTCTGCTGTCGCATATGGGCAAGTTGTTCGAGCGGCTGCTGCTGAGAAGGGTGTCGCCGCACATCCTTCTCAGACCCGAGCAATTCGGGTTTCGCAGCGGTCACTCGACAACGCTGCAATTGGTCCGCGTTATGCACCACTTGGCGGATCGGTCCAACGCGCGCCAGTACACGGCCGCAGTCTTTCTCGATATCGAGAAGGCCTTCGACCGTGTCTGGCATGCGGGACTGATCTACAAGCTGTTGCGGAACACGGACCTCCAGCACGCCTATGTGCGACTGCTGGGGTCGTACCTGGAGGGAAGATCCTTCCTTGTCGCGGTCGAGGGCGCAAAGTCGTCGGTGCGCCCAGTCACGGCCGGAGTTCCCCAGGGAAGCGTCCTGGCACCAGTCCTCTACGCTCTCTACACCAACGACATTCCCACGCTTGAGGGCAACCTCCAAGCGTGGGAAGCCGACGTGAAGTTGGCGCTGTTTGCCGACGACAGCGCCTACTTCTCGTCCTCTAATTTCCCCTCTGCGGCCATTTCGAGGATGCAGAGGCTGTTGGACCTACTGCCCCAGTGGCTGGACCGATGGAGGGTCGCGGTCAACGTGGGGAAGACCGCGGCTATCCTCTTCGGTCCGGTCCGCACAAGAGCCGTCCCAGGACAGCTCAGTCTCCGTGGAGTCAATGTCGAGTTTAGGCCCAGTGTCCGATACCTGGGAGTCAATATCGACCGGAGTTTGAGGATGACCGCCCACGCCAAGTCGGCGTTGGCGGCCGCCCGCTATGCGAGGTTTCTCCTCCGGCCGGTGTTGGCCTCCAGGTTGCCGACCAGGACTAGACTCGGCATTTACAAGACGTATGTTCGTTCCCGTATCACGTACGCAGCTGCGGCCTGGTATCACCTCATCCCGCAGATCATGCGGGTGAAGTTACAGGCCCAGCAGAATCTGGCTCTTCGCACGATAGTCGGAGCAGGGCGTTACGTCAGAAATGACGTAATCGCCCGGGATCTAGATGTGGAGTCGCTCGAGGAGTTCATCCGGAGGCTAGCTCGTAATATGTACGAGCGGGCTGACGGTGGACCCCACGAGCATCTCCACAATATAGCTCCCTTGCACGCCAGACCACCTGATGGTCAGGCGCTACCAAGGGAGCTACTGAAACCCCCGGCTATGGATAATATCTCCTTGGAATTTGCCGCTGTTCTCCTCAGGGTTGGCCAGAGGATTGGTCATGGTTCTCGCGGCGAACTGAATCCCATCGCCTGCGGAAACAATAGTTCGCTTGAACCACATTAA

Protein

MAASQSSGPKRPSIQAQVAPPPRSGGRAQVDLRRHPPIVVEALPNWPRHMAAIRERLGRAPSGRPYGAGFLFLPSSIEEYREVQAYLSEVSARDSAIKWYCYALAEDIPSKVVVRGLPVDTDAADVTQALRELGFPARHARCIEARRGRPGCVFFVALDHLSKDDLARLYAVEELLYLPGVSVEGWRTSRGPAQCHRCQAFGHASSNCHRAVRCVRCAEEHVVADCPRPRDGPFSCANCGRDHTAVDRRCPVFRRRARMMGVTIPPPVPRAPRAELHPAPVLPSSSQAPKGKGKGKGKSSQPQPPPQSLIIHPAVVVEAKPSAATLMAEANTPRQGPKPQPAPRSTVAASLSQPVKQNQKALKNKLKNRKKKERRKLQKQLLVAEVLPLSAPIAPNSTTMEVDINPSQTIENQANDPLPEPGEILPQTQPDTSQPPLPPRPQRERRSGRSMASQELRIIYWNPGGVKTRKNDLLVLAREYNPEVVLLGETKLRPRDVFRIPNYFMYRRDEVSPAGTPFRGTAALVRRDVVHDQLDLLAFTSTRSIGVRIHTSGGDMRVYAAYRPPGPDFHPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTHIPTAAQLQPDVLDVCVHKGLRCPLTIEALYDLGTPHLPILVTLGMGLTRVATSPLRPKVDWELFKRLLVDLPVIQDPNTPEGVDDAAVRLVDSIRGAIDQATTLVPSGGPRGILPAHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELAAKISSYRGYAWEERIEEAREDPSSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADVLAVMLERQFAPNNSAPSEAAFHQSVEESVASLLSSPVPPLGDGDFITPSELRLSIKRMKRRKAPGEDGIPSLAFFHFPETVVSFMTRLFNSILSTGHFPGTWKLGKVIALPKPGKDRRNPSSYRPITLLSHMGKLFERLLLRRVSPHILLRPEQFGFRSGHSTTLQLVRVMHHLADRSNARQYTAAVFLDIEKAFDRVWHAGLIYKLLRNTDLQHAYVRLLGSYLEGRSFLVAVEGAKSSVRPVTAGVPQGSVLAPVLYALYTNDIPTLEGNLQAWEADVKLALFADDSAYFSSSNFPSAAISRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGPVRTRAVPGQLSLRGVNVEFRPSVRYLGVNIDRSLRMTAHAKSALAAARYARFLLRPVLASRLPTRTRLGIYKTYVRSRITYAAAAWYHLIPQIMRVKLQAQQNLALRTIVGAGRYVRNDVIARDLDVESLEEFIRRLARNMYERADGGPHEHLHNIAPLHARPPDGQALPRELLKPPAMDNISLEFAAVLLRVGQRIGHGSRGELNPIACGNNSSLEPH

Uniprot

NA

ProteinModelPortal

NA

PDB

6AR3 E-value=5.30074e-05, Score=116

KEGG

105842439 no KO assigned | (RefSeq) uncharacterized LOC105842439

GO

GO:0003676 GO:0008270 GO:0006508 GO:0007219 GO:0007275 GO:0050793 GO:0016876 GO:0043039

Length:

1396

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01699

Exp number, first 60 AAs:

6e-05

Total prob of N-in:

0.00006

outside

1 - 1396

Pi

282.683614

Theta

188.715951

Tajima's D

1.560115

CLR

1.583494

CSRT

0.793160341982901

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree