Silkworm Genome Informatics Database

Gene

KWMTBOMO08414

Annotation

PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]

Location

Bomo_Chr14(-):8395114-8400552 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.704 Nuclear Reliability : 1.906

CDS

ATGATTGCTGGTTCGGGGACGATGGCGGCCATAGCCATAAGAAGAGACGCGGCGATCCCCCCCCTGGCGATGGTGACCAGGGGCCAAGGGTTCGTCGCGGTGCAGTTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAACAGGCCTACTGTCGAGTTCGGGCATTTCCTGGGCGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCCCGTCCAGTGATTCTCGCGAGGGATCTCAACGCGAAGTCTGTCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTACTGGAGAGGTGGGTGAACGCGGCCGGCCTCTGTTTGTTGAATAGAGGTTCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCGAGCCCAGCCATCGCACGCCGTATCTGCGACTGGAAGGTTTTGGAGGGGGCGGAGACGCTGTCAGATCACCGATATATTCGGTCGCGCACTAAAGAGGAGCCCCGCCGTCATCCACCTATTATGGTGGAAGTGCTCCCAAATTGGTCCCGCCATATGGCGGCCATCAGGGAGCGCTTGGGGAGGGCACCCTCCGTGCGCCCTTACGGAACAGGGTTCAGATTTCTGCCAGCGTCGGCAGAGGAATATAGAGTGGTCCAGGCCTACCTTGCCGGGGCCTCCTCAGCGGACAGTGCCATCAAATGGTATTGCTACGCGTTGGAGGAGGACATCCCGACAAGGGTGGCTATTCGCGGACTACCTGCCGACACCGACGCGGCAGAAATCACAAATTCCTTGAAGGAGCTGGGGTTTCCGGCTCGCTATGCCCGATGCATACGGGCTAAGAGAGGGAGGCCGGGGTGCGTATTTTACGTTACCCTCGACCACCTCTCTAAGGAAGGCCTCGCCCGCTTGTACGCAGTTGAAGAACTGCTGTACCTGCCGGGGGTGTCAGTTGAGGGATGGCGGCCAAGCCGTGGGCCGGCGCAGTGTCACCGCTGCCAGGCCTTCGGCCACGCCTCCACCAATTGCCACCGAGCGGTCCGCTGTGTGCGTTGTGCGGGTGAGCACATCGTGGCGGACTGCCCGAGGCCGAGGGAGGGGCCCTTCACCTGCGCCAACTGCGGAAAGGACCACGCAGCCGTTGACAAACGGTGCGTGGCCTACCGCAGGAGGGCGAGGATGTTGGGTGTTACCGTCCCCCCTCCCGTACCACCGGTGCCGCGCGCCCGGAGGCCTCCAGCTCCTGCAGTATCAGTACCAACACCATCTCAAGCAACTTCGACTCAAGTTCCGGCCGCTAGAGTCGTATCAAGTAAGGGCAAGGGCAAAGGGAAATCGTCCCAAGCCCCAATTCTCGCCCCAACTCCCACCTTACACTCACGGCAGCCCAACCTAGTGGAGTCGAATCCAGCAGCCTCCTCACTGATGGCACCGGCTAACGCTGCCCGACCGGCCGTTAGACCTCAACCGGCACCAAGAATTATTTCAAAAAAAAATAAAAAAAAGAAAGAGAAAGTCAAAGAGAGAAAGCGAGCGCAAAGACTAGCCGCCAATATCCCACCCACCCCAGTAGAGAGAATGACTCCAACTCCAATTTCTGTGCCAATGGAGGTCACAGAAGCAACGCCCCCCCTTACAACCAATACAACACCAACACCAATTGTAATCCACGCTCAGCCCCAAGAAAATTCGGTCGACGTGGGTATGACTCAGCCCCCACTACCACCCCGCCCGCAGAGGGAGCGGCGCAGCGGCAGACAGGACACGCAGCCTGCCGGCTTCGCTGCCTGGCTCCTCTCCCTGTGGGAGAAACTGTCCGAGGAGCTGCGCATCATCTACTGGAACCCCGACGGGATAGGGTCCCGGAGGTCGGAGCTCATCCGACTCGCCCAGGAGTATGACCCGCAGGTTATCCTCCTGGGCGAGACCAAGCTTAAACCTCGACAAGATTTTAGGATGCCCAACTACTTCGTGTACCGACGGGACGAACTGACCTCCAACGGGCGCCCGTTCAGGGGCACTGCGGCGCTCGTCAGGAGGGACGTGGTGCACGAGGAGCTTGAGCTACTGACCTTCGCCTCTACCAGAACGGTCGGGGTGAGGGTCCACGTACCGGGGGCCGAATTGCGGATTTATGCCGCGTATCGACCCCCGGGTCCTGATTTTGTCGAGGACGATATTAGACGGGCCTTGAACCATGATCGCCATCCGGCCTTGGTGGTCGGGGACCTCAATGCGAAACATGTCGCTTGGGGCTCCCGAATCATCACGCCGCCCGGAAGGCGATTGTACGAGGATGCCGAAAGGGGGGACTACTGCGTGGTCGGCCCCAACGAACCCACCCACGTTCCAACGTTGGCCCGGTACCAACCGGACGTGTTGGACGTGTGTGTTCATAAGGGGCTACGGTGCCCTCTAGCGATAGAGGCACTGTACGACCTGAGTACCCCTCACCTACCGATCTTGGTCACGGTGGGTTTGGGGCTCACTCGGGTCGCGACATCCCCTCTCAGGCCTAGGGTCGACTGGCAGTCCTTTACGGGACTGCTGGCCGACCAATCCTTGTTTCAAGACCCGTCTACCCCTGATGAGGTCGACACGGCGGCTTCCCGTCTCGTCGACACCATCAGGGGAGCCCTGGACCAAGTGACGACTCTGGTACCCAGCGGGGGGCCCAGAGCGGAACTCCCGGTGCACCTCAAGACGTTAATTCGTCGGAAGAGGGCACTGAGGAGGCTCTGGGCGACATCTAGGTGTCCCAGGATTAAGCGCGAGCTCAACCGACTTGAGGGGGAGCTGGCGACTAAGATGCGGACTTACCGGGGTGATTCCTGGGAGGGGGGACTGTTGGACGCGTCCGACGACCGTACGATGGCCCCCCTTCACCGCATCTGTCGCCGGCTCACCAACAAGCCTTCCCCCACTTGCCCCTTGGAGGACGAGGGGGGAAGACGGTGTTTTACACCGTTGGCTCGTGCCGAAGTCCTGGCCAACTCGCTGGAGCGGCAGTTCACTCCGAATGTCTCTGCACCCTCGATGGCTGCATTCCATCGCGAGGTGTCAGAGGGTGTAATCCAATTCCTCAAACCGGAATCGCCGGGAGTCGAGCTGGGAGATGACGACTTAGTCACTCCCAGCGAGGTGCGCCTCCTCATCAAGTTGATGAAGAGGCGCAAAGCCCCCGGCGAGGACGGTATTCCTCCCCTCGCCCTGCAAAACCTCCCTCCCTCAATCGTGTCAGCAATGACACGATTGTTCAATTCCATTCTCCGGGTAGGACACTTCCCTGGAACTTGGAAACTGGGCAAGATCATCGTCTTGCCCAAACCCGGCAAGGACAGGAGAAAGCCCTCCAGTTACCGACCGATTACCTTGCTCTCGCACGTGGGCAAGTTGTTCGAGCGGCTGCTCCTGAGGAGAATATCGCCGTATATTCTCCTCAGGCCGGAGCAATTCGGCTTTAGAAGCGGCCACTCGACGACTCTGCAACTGACCCGTGTCCTGCATCACTTGGCGGACCGGCGAAACTCGGGCCAATACACGGTCGCGGTCCTCCTCGATATCGAGAAGGCCTTCGACCGTGTGTGGCACGAGGGGCTGGTCCACAAGCTGCGGGACGCGGGCCTACCGCACGCTCACGTGCGACTGCTCGGGTCGTATCTGGAGGGCAGAACCTTCTTTGTCGCGGTCGAGGGCGCACGGTCTTCCGTGCGTCCCATTACGGCCGGGGTTCCCCAGGGTAGTGTCCTATCACCTATCCTATACGCCCTCTACACCAATGACATCCCCACCCTGGAGGGTCACCTTCGGGCGTGGGAGGAGGACGTGAAGTTGGCCTTGTTCGCTGACGACTCGGCCTACTTCTCGTCCTCCCCGTTCCCCTCTGCAGCCATCATGAGGATGCAGAGGCTTTTGGACATACTGCCCCAGTGGCTGGACCGTTGGAGAGTCGCGGTCAATGTGGGAAAGACCGCGGCCTTACTCTACGGTCCGGTCCGTATCAGAGTCGTCCCAAAGAAACTCAGCCTCCGAGGTGTGAATGTCGAGTTCAGGACCACGGTCCGGTATCTCGGATGCGACATCGACCGCTCTTTGAGCATGGTCGCGCACGTCAACCGAGTCATCGGTCAGGCTCGCGCGGCCATGTTCTTGTTGCGGCCGGTGTTTGCGTCCGGGCTTCCGACCAGGACCAAACTCGCCATTTACAAGACATACGTCCGTTCCCGCCTCACATACGCTGCTGCGGCCTGGTATCACCTGTTGTCGCCGTCCCAGCGATCTAGGTTGCAGGCCCAGCAGAGTCTTTCCCTCCGCATTATCGTCGGGGCCGGGCAGTACGTCAGAAATGACGTTATTGCCCGGGACCTAGGTGTGGAGTCGCTCGTGGAGTTTGTGACTAGGCTCGCCCGTAATATGTACGAGCGAGCCGAAAACGGGCCCCATGAGCATCTCCACAGCATAGCCCCGCTGCACGCCAGACCACCGGATGGTACGGCGTTGCCGCGGGAGCTATTGGTACCCCCGACGATCGTTCGGAGATAA

Protein

MIAGSGTMAAIAIRRDAAIPPLAMVTRGQGFVAVQLEGTVVIGAYFSPNRPTVEFGHFLGGIGAIARRLAPRPVILARDLNAKSVAWGSPRSDARGRLLERWVNAAGLCLLNRGSVATCVRWQGESIVDVTFASPAIARRICDWKVLEGAETLSDHRYIRSRTKEEPRRHPPIMVEVLPNWSRHMAAIRERLGRAPSVRPYGTGFRFLPASAEEYRVVQAYLAGASSADSAIKWYCYALEEDIPTRVAIRGLPADTDAAEITNSLKELGFPARYARCIRAKRGRPGCVFYVTLDHLSKEGLARLYAVEELLYLPGVSVEGWRPSRGPAQCHRCQAFGHASTNCHRAVRCVRCAGEHIVADCPRPREGPFTCANCGKDHAAVDKRCVAYRRRARMLGVTVPPPVPPVPRARRPPAPAVSVPTPSQATSTQVPAARVVSSKGKGKGKSSQAPILAPTPTLHSRQPNLVESNPAASSLMAPANAARPAVRPQPAPRIISKKNKKKKEKVKERKRAQRLAANIPPTPVERMTPTPISVPMEVTEATPPLTTNTTPTPIVIHAQPQENSVDVGMTQPPLPPRPQRERRSGRQDTQPAGFAAWLLSLWEKLSEELRIIYWNPDGIGSRRSELIRLAQEYDPQVILLGETKLKPRQDFRMPNYFVYRRDELTSNGRPFRGTAALVRRDVVHEELELLTFASTRTVGVRVHVPGAELRIYAAYRPPGPDFVEDDIRRALNHDRHPALVVGDLNAKHVAWGSRIITPPGRRLYEDAERGDYCVVGPNEPTHVPTLARYQPDVLDVCVHKGLRCPLAIEALYDLSTPHLPILVTVGLGLTRVATSPLRPRVDWQSFTGLLADQSLFQDPSTPDEVDTAASRLVDTIRGALDQVTTLVPSGGPRAELPVHLKTLIRRKRALRRLWATSRCPRIKRELNRLEGELATKMRTYRGDSWEGGLLDASDDRTMAPLHRICRRLTNKPSPTCPLEDEGGRRCFTPLARAEVLANSLERQFTPNVSAPSMAAFHREVSEGVIQFLKPESPGVELGDDDLVTPSEVRLLIKLMKRRKAPGEDGIPPLALQNLPPSIVSAMTRLFNSILRVGHFPGTWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPEQFGFRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRLLGSYLEGRTFFVAVEGARSSVRPITAGVPQGSVLSPILYALYTNDIPTLEGHLRAWEEDVKLALFADDSAYFSSSPFPSAAIMRMQRLLDILPQWLDRWRVAVNVGKTAALLYGPVRIRVVPKKLSLRGVNVEFRTTVRYLGCDIDRSLSMVAHVNRVIGQARAAMFLLRPVFASGLPTRTKLAIYKTYVRSRLTYAAAAWYHLLSPSQRSRLQAQQSLSLRIIVGAGQYVRNDVIARDLGVESLVEFVTRLARNMYERAENGPHEHLHSIAPLHARPPDGTALPRELLVPPTIVRR

Uniprot

NA

ProteinModelPortal

NA

PDB

1WDU E-value=1.82751e-09, Score=155

KEGG

101739096 K08220 MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein | (R

GO

GO:0003676 GO:0008270 GO:0020037 GO:0006099 GO:0016491 GO:0051603 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

1513

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12377

Exp number, first 60 AAs:

0.0878

Total prob of N-in:

0.00429

outside

1 - 1513

Pi

251.612149

Theta

22.830008

Tajima's D

-1.867311

CLR

24.652673

CSRT

0.0233988300584971

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree