Gene
KWMTBOMO08361
Pre Gene Modal
BGIBMGA009228
Annotation
PREDICTED:_SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_E_member_1_isoform_X2_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 3.637
Sequence
CDS
ATGCCCAGTCCTCAGAGCAATCCGCACTACATGATTGCGGGCCCCCCAATGAGTTTCGGCATGATGAAAGGCGGTATGAATGCACCGTCGCCGCACCATAACCAATATCAGTACCACCCGCAATACCAAGGTGGGGGGGGCATGGTTCACCCGGGTCCCCCGGGGGGCTACGGCCCGTGGCACGCCCCCCAGCAACAGGGCCGTTTCGCTGCAGAGGGCGCCCGCCGCGCGGCCTCCGCCTCACAGCCCTCACAAGGTGCCAAAGATGATAAGACAAGTCCATTTGTATCCACCGTACATTCACATCCTGGATTCCAACCTCAGAAAATCGGGAAAGGTGCTGGTGTTGGAGCCGGACTACCAAAGCCACCAAAACCTCCAGAAAAACCTCTCATGCCGTACATGAGGTACTCACGCCGTGTATGGGACAGTGTAAAAGCAGCACATCCAGACCTCAAACTATGGGAAATTGGACGTATAATAGGCGGCATGTGGAGGGACCTGCCTGAATCTGAGAAAGCTGGGTTTGTCGATGAATATGAAGCTGAAAAGTCCGAATATGAGAAAAGCTTGAAGGCGTACCACAATTCTCCCGCGTACCTCGCTTACATTGCAGCCAAAAATAAAGCCGTAGTAGGTAACTTGGAAGAAGAGACCTCCACTAAAAAGGGCAGTTCACAGAAAGAGCAACAACAGCAAGACAGACGAATTGACATACAACCAGCTGAAGATGAGGAAGATCAAGACGAAGGTCTATCTGTGAAGCATGTGGCATACGCTCGCTATTTACGAAATCATCGTCTCATCAACGAAATATTCTCAGACACTGTGGTGCCGGATGTGCGGTCGGTCGTCACCACCGCTAGGATGCAGATATTGAAAAAACAAGTGCAGTCCTTAACGATGCACCAGAAGAAGCTGGAAGATGAATTGCAACAGATTGAAGAGAAGTTCGAAGCCAAGAAACGCAAGTTTATTGAGAGCAGCGAAGCATTCCAAGAGGAACTCAAGAAGCACTGCAGGCCGGCTGTGGACGAGGACACATTCCAGCGCATGGTGGAGCGAGCTCTGGAGCAGATGCGTCGCGGGATCAACCCCACCTCGCAGTCGCTCAGCGCCGTCGCTCACGCCGAGAAGAAAGACGAGCCGATGGACCAAGATCAAAATCCAAGTAAACCAGAAACAAACGGACCTCATCCTCCCACTCAAGTGGATAAAGTGTCTACCAGTGACGTGAAGCCTGATTCCATAGCAACTGACATAAAAGTCGAGGAGCCAAGAGAAAAGGAACCTGAAAATGGACCAAGCCAGGCAGATGACGAGGGAGATCGTAAAGAAGAAAAACCAGTAGAGGTAAAAATGGAGAACAAGGAAAGCATTCCACCCGCTCCCGCCCCGCAGCATCCCCCGCCCGCGCACCCTCCGCACATGACCTCGCCTCCACACCACGCAATGATGATGGCGTCGAATCCTACAACTGCTCCGCATCCTGGCCCGCCAGCTCACGGGGGTCCTCCACCGCCAACAGTGGGGGCGTACGGCGCCCCGTACGGCGGCCGGTACTACGGCGGGTACGGGGGCGGGTTCCCCGGTGCCTACCCCCCGCACCCCCCACACCCGCCGCACCCATACTACCCCGCCGCCGCCCCGCCCGAACACTACGCGCATCTACCGCACCACGCGCCTCCACAGCATCACGACGTCAAACAGGAGGAGCCACAGCCTAAGAAAGAGAATGAATGA
Protein
MPSPQSNPHYMIAGPPMSFGMMKGGMNAPSPHHNQYQYHPQYQGGGGMVHPGPPGGYGPWHAPQQQGRFAAEGARRAASASQPSQGAKDDKTSPFVSTVHSHPGFQPQKIGKGAGVGAGLPKPPKPPEKPLMPYMRYSRRVWDSVKAAHPDLKLWEIGRIIGGMWRDLPESEKAGFVDEYEAEKSEYEKSLKAYHNSPAYLAYIAAKNKAVVGNLEEETSTKKGSSQKEQQQQDRRIDIQPAEDEEDQDEGLSVKHVAYARYLRNHRLINEIFSDTVVPDVRSVVTTARMQILKKQVQSLTMHQKKLEDELQQIEEKFEAKKRKFIESSEAFQEELKKHCRPAVDEDTFQRMVERALEQMRRGINPTSQSLSAVAHAEKKDEPMDQDQNPSKPETNGPHPPTQVDKVSTSDVKPDSIATDIKVEEPREKEPENGPSQADDEGDRKEEKPVEVKMENKESIPPAPAPQHPPPAHPPHMTSPPHHAMMMASNPTTAPHPGPPAHGGPPPPTVGAYGAPYGGRYYGGYGGGFPGAYPPHPPHPPHPYYPAAAPPEHYAHLPHHAPPQHHDVKQEEPQPKKENE
Summary
Uniprot
Proteomes
PRIDE
Pfam
PF00505 HMG_box
SUPFAM
SSF47095
SSF47095
Gene 3D
ProteinModelPortal
PDB
6A20
E-value=0.0948512,
Score=85
Ontologies
PANTHER
Topology
Length:
580
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00331
Exp number, first 60 AAs:
0.00331
Total prob of N-in:
0.00055
outside
1 - 580
Population Genetic Test Statistics
Pi
208.651069
Theta
185.529309
Tajima's D
-0.825682
CLR
124.494878
CSRT
0.168291585420729
Interpretation
Uncertain
