SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08128
Pre Gene Modal
BGIBMGA001069
Annotation
PREDICTED:_uncharacterized_protein_LOC101736849_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.689
 

Sequence

CDS
ATGAGAAACGTTGGTGCTCATCTCCTAGAAGACAAAATGGACGAGGCCGTAACTCACTATATAAATACACATCAAGCAAACGAGACTGTTCATGTAACTACAAATGGACTACCTCTCAGTGTCCAAGATGATGGCGGCGGACGTGTCACCGTCATGCACACGCAAAACTACTCAGCACCAATGTGCAGCAGACAAGTATCAGTCAACGATCAAGTAACAGAAGGTCAATGGGGCGAAGAACTCCTAGATCCTGACAGCAGGATTGCAGCTATTGTAGCACAACTAGCCCAGCAGTCGAGAACCTCACACCATCTACACCATAAGGTGCAGCAAGTCAGGAACGATGTAGACACTTCGGTAATCCTAGATGGGTCGATGAGGCTTTACAACGGACAGACTTTGGAACAACAACAAGAACCTATTGTGGTACACGTACCACAACTACCGCCACTGCCCCCACTGCAAGAAATGAAGAGATGCCAGGAAACTGACTGGTTTCATAATAAAACAAAAAATGTTGCAACACTAAAAGACAACAATCAAATCCTTACAGCAGCAGACAGTCCAGTTCTGGAACTGGCTGGTGCCTCGCCGGTTCAGAATAAACACCAGAGCAAGAAAAGCTTGCCGCATAAGAAGAGGATATCCAAAAAATTGAAGAAAAGTAATGGGAGTTGCACTCCTCAACAGGACATAGTTGTGATTAGCTGTACAAACGAGGTGCCTCATGAAGAAATCCTACCTGATAACTTTGTGACTGGAGTGCAACACCAGGACCAGATGCCGGAAGATACTCATCATATCACACACGAGGTTCGACCGATTTTGTTATGTCAATTATGCGGAGAGTTCTACGGTGAAGAACAGTTGAAGTTCTTCCAGCATCTTAAACAGCACTACGAACCTCACACTGCAATAATCATAGAAAATCCTGTACCTGATTTAGGAATTGATAAGATGACAAACACGTGTATCGTTGACAACGTGGCAACCCTACCAGACTCTATAGTAGAACTCTCCCTAGAAAACACAGTTCCTAAAACAATGTACCAAAATATAGATAAACAGATATTATATACGACAAACGATAAAACACTTAGTTACACGAACAATAAAGTTCAATATTCGATGGCAAACATCGAGGGCCCGAAGGACGTGACCAGTACAGACGCCGACAAGAGTGACCTGTACGACACTTTGGATAAATTAGAACTGTACAGTTGCGCGAAGTGCAGCAAGTCGTTTCGGAAACAGAAGCAATGCGAAGCTCACATCAAGGAGGCTCATTCTAATGGAAAGATAGACGACATGGGCGAGTTCAGCGAACCCGAGGACCTGATGGAGGGGATCCACGTGTCGGTGGAGGAGGCGGCCGACCAGTACGAGCACACCCTGCTGCCGCACCTCACTGTGGACAACGGACACGTGCATCAAGAGCACGTCCGACATTGGTACTCCCGCGGCAACGCGTGCGACGAGAGCGGGTGCTGCGGACTCTGCAGCACCGCCAGGGAGCACGACGCGCCGCCCCTCAAAGTACTCAAAGAGGAAGTGCTTCAGCGCATCTTAGAGACGGACGTCGCCAACGAACCGATGATCCCCGAGAGCATCATGCCGGAGCCGGAGTTGCCGCCGCCGCAGTCGCCCAAGGAGCCCCAGAAGGAAGATAAGAAGAAGACCGGCAAGAAATACGGGTGTCCGCACTGCAGCAGGGTCTTCTACCACAGGAGCAGCCTGTTCTACCACGTGCTGTCCCACGGCGGGAAGCAGCATGCGTGCAAGGAGTGCGGGAAGGCCTTCTATACTTCTGGAGCCTTGAAGATCCACCGGCGCGTGCACAACGGGGACCGGCCCTACAAGTGCGACGTGTGCGGCCACGACTTCCGCCAGTGGACCGACCTCAAGTACCACAAGGTCATCCACACCAACCAGAAATGTTTTAAATGTGAGTTCTGCGGCAAAGAGTTCGCCCGCAAGTACTCGCTCAACGTGCACCGGCGCATCCACACCGGCGAGCGCAACTACAAGTGCGACTACTGCACCAAGTCCTTCCGCGCCTCCTCCTACCGCCTCAGCCACATGAAGACGCACACCGGCGACAAGCCCTACAAGTGCGAGCAGTGCGACAAGTCGTTCCGCGTGGCCTTCGACCTGAAGCGCCACGTCCTCACGCACGAGAAGGCGAGGCAGCGTCTGGAGCAGCAGAACAACAAGTCGAGACCCGAGAAGGAGCAGGCGAAGACCAAGCAGGACGACGCAGACAAGAGGTCGATGGCCGCCAAGGGCGAGCGGAAGGCGCGGGGGGGTCGCAAGCTGCGGAGGGGCGCCCCCAACGTGACCGTCGCCGACGAGCACTTGAAGGTGAAGCAGGAGTTCAGGCCGGAGTACAGGCTGCGCGAGGAGTTCGGCGAGGAGTACCGGGCGCCCTCCGTGCTGCGCGACACCACGGACGGCAAGGTGCACGTGTACACGCACGTGGCGCGCGACGGAGCCCTGCCCGACGGCGCCTTCTTCGAGAAGCTCACCGCGCTCTACAACGTGCCCGCCGTCTAG
Protein
MRNVGAHLLEDKMDEAVTHYINTHQANETVHVTTNGLPLSVQDDGGGRVTVMHTQNYSAPMCSRQVSVNDQVTEGQWGEELLDPDSRIAAIVAQLAQQSRTSHHLHHKVQQVRNDVDTSVILDGSMRLYNGQTLEQQQEPIVVHVPQLPPLPPLQEMKRCQETDWFHNKTKNVATLKDNNQILTAADSPVLELAGASPVQNKHQSKKSLPHKKRISKKLKKSNGSCTPQQDIVVISCTNEVPHEEILPDNFVTGVQHQDQMPEDTHHITHEVRPILLCQLCGEFYGEEQLKFFQHLKQHYEPHTAIIIENPVPDLGIDKMTNTCIVDNVATLPDSIVELSLENTVPKTMYQNIDKQILYTTNDKTLSYTNNKVQYSMANIEGPKDVTSTDADKSDLYDTLDKLELYSCAKCSKSFRKQKQCEAHIKEAHSNGKIDDMGEFSEPEDLMEGIHVSVEEAADQYEHTLLPHLTVDNGHVHQEHVRHWYSRGNACDESGCCGLCSTAREHDAPPLKVLKEEVLQRILETDVANEPMIPESIMPEPELPPPQSPKEPQKEDKKKTGKKYGCPHCSRVFYHRSSLFYHVLSHGGKQHACKECGKAFYTSGALKIHRRVHNGDRPYKCDVCGHDFRQWTDLKYHKVIHTNQKCFKCEFCGKEFARKYSLNVHRRIHTGERNYKCDYCTKSFRASSYRLSHMKTHTGDKPYKCEQCDKSFRVAFDLKRHVLTHEKARQRLEQQNNKSRPEKEQAKTKQDDADKRSMAAKGERKARGGRKLRRGAPNVTVADEHLKVKQEFRPEYRLREEFGEEYRAPSVLRDTTDGKVHVYTHVARDGALPDGAFFEKLTALYNVPAV

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
PDB
5V3G     E-value=3.27718e-31,     Score=340

Ontologies

Topology

Length:
850
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  850
 
 

Population Genetic Test Statistics

Pi
21.28255
Theta
18.582925
Tajima's D
0.495978
CLR
0.581878
CSRT
0.518174091295435
Interpretation
Uncertain
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