Gene

KWMTBOMO08005

Annotation

Zinc_finger_protein_316_[Papilio_machaon]

Location

Bomo_Chr13(-):12186607-12190293      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.621

CDS

ATGTACCAACACACTGGAATAAAATCTTTTAAATGTAACAAATGTTTCAAAGAATTTATTACGCACTATGAAAAGAGGAAACATATGAGATGTCACAAAATTTATATCTGTGAAGAGTGCAAGAAACAGTTTGATAAATACAATGATTTTCAAAAACATAAAAAGGAACATGATACCAAAGAATATTGCTGTGATAAATGTGGTGTTAGTTTTAAGGAAAGAATACTCATTGTTCGCCATCTGAAAAAACATTCCCAAAGTAATAATCGACATTTTCCTTGCCCTCACAAAAATTGTGGAAGAACTTATTCAAGGAATAGTAATCTAAAACAGCATATTTTAACAAAGCATGAACAAATAACTCATGATTGTCACATATGTAACACTCGATTGTGTTCAAAAGCCAAACTGAATAATCATTTAAAACTACACAATAAACCGATCACGGAAGTAGTTTCTGTACGTGCAAATACCAAAGCGGCTGGTCGCAAAACTCGAAAGGATATAGGCGTTCCGAGGAAGTCTATTGCATTGAAACTAGCCGGCTTTAAAGAACAAAACGAAATAAAATCAGCTATACCATATTTAGCAGAAACGTGTATGACCTAG

Protein

MYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICEECKKQFDKYNDFQKHKKEHDTKEYCCDKCGVSFKERILIVRHLKKHSQSNNRHFPCPHKNCGRTYSRNSNLKQHILTKHEQITHDCHICNTRLCSKAKLNNHLKLHNKPITEVVSVRANTKAAGRKTRKDIGVPRKSIALKLAGFKEQNEIKSAIPYLAETCMT

Uniprot

A0A1E1W727   A0A1E1W5P4   A0A0N1INQ6   A0A1E1W1D7   A0A194QC01   A0A212FNZ1   + More
A0A2A4J8I2   A0A2H1V421   A0A2J7R8T9   A0A026W0N5   F4X1T8   A0A293N6B4   A0A195C6U8   K7JIF6   A0A195BQT8   B4M1N4   A0A158NE70   A0A232EKY1   A0A0M4EYX7   A0A151X4G2   A0A1I8M7V6   A0A195ESD7   A0A1Q3EZY3   A0A0C9R2X4   B0X3D6   A0A0P5X794   H2L3B4   A0A0P5DXE8   A0A0P5CSF6   A0A0P5EBN9   A0A0P6BER7   A0A195D803   A0A0P4Y085   A0A1B0BBG6   A0A1A9XX04   Q1DGG6   E9HBN8   A0A0P6G936   A0A0L0C650   A0A0P6DY10   A0A0P5JZ41   A0A1I7VFB8   A0A0P5RZE7   A0A2A3EP55   Q16HM7   B3MWC0   A0A0G2KCQ2   A0A087ZRK1   A0A1E1XVP2   E2AX63   A0A182HAN9   A0A023G8V5   G3MR60   A0A1E1XCR0   A0A3P9N258   C3ZVG8   A0A3P9KP31   A0A1A9ZII5   A0A310SED6   A0A096MIS1   A0A1Z5L971   A0A3P8SL36   A0A2R5LFR9   A0A3P8SKP7   A0A1B0DA08   A0A1I8PMN1   A0A3Q3EFN0   C3ZSW2   A0A1J4KT44   A0A0P5CKN9   A0A0P5LKK6   A0A0P4ZYG2   A0A2I4BWN0   B4JP09   A0A3N0XT22   B4L2U8   A0A3B3CII4   A0A3Q1JGL8   C3ZDL1   A0A1S0TGT8   D2A389   B4NPP4   A0A3P8T634   A0A146R7X6   A0A1I7VFH7   A0A3Q4IGM4   A0A3B3CJB8   A0A3P8R4S9   C3ZNY3   E9IGU9   A0A287B1N6   A0A3Q7PLX8   A0A1B6GPA5   A0A286ZMW6   A0A3B3VEN3   I3LQ98  

Pubmed

26354079    22118469    24508170    21719571    20075255    17994087    + More
21347285    28648823    25315136    26131772    17554307    17510324    21292972    26108605    25217238    23594743    29209593    20798317    26483478    22216098    28503490    18563158    28528879    29451363    18362917    19820115    25186727    21282665    30723633   

EMBL

GDQN01008281    JAT82773.1    GDQN01008863    JAT82191.1    KQ460937    KPJ10698.1    + More
GDQN01010247    JAT80807.1    KQ459439    KPJ00956.1    AGBW02004200    OWR55461.1    NWSH01002453    PCG68271.1    ODYU01000577    SOQ35590.1    NEVH01006721    PNF37253.1    KK107503    EZA49625.1    GL888551    EGI59595.1    GFWV01023232    MAA47959.1    KQ978251    KYM95911.1    KQ976424    KYM88503.1    CH940651    EDW65588.1    ADTU01013079    ADTU01013080    NNAY01003710    OXU18972.1    CP012528    ALC49255.1    KQ982548    KYQ55306.1    KQ981993    KYN30817.1    GFDL01014196    JAV20849.1    GBZX01001375    JAG91365.1    DS232312    EDS39828.1    GDIP01076962    JAM26753.1    GDIP01151107    JAJ72295.1    GDIP01170244    JAJ53158.1    GDIP01143855    LRGB01000084    JAJ79547.1    KZS21108.1    GDIP01016179    JAM87536.1    KQ981153    KYN09001.1    GDIP01243909    JAI79492.1    JXJN01011439    CH901889    EAT32245.1    GL732616    EFX70877.1    GDIQ01036880    JAN57857.1    JRES01000948    KNC26879.1    GDIQ01071058    JAN23679.1    GDIQ01192060    JAK59665.1    GDIQ01101161    JAL50565.1    KZ288202    PBC33480.1    CH478159    EAT33755.1    CH902625    EDV35265.1    CU467646    GFAA01000275    JAU03160.1    GL443520    EFN61946.1    JXUM01123026    KQ566670    KXJ69922.1    GBBM01005176    JAC30242.1    JO844361    AEO35978.1    GFAC01002153    JAT97035.1    GG666689    EEN43489.1    KQ770716    OAD52599.1    AYCK01011382    GFJQ02003232    JAW03738.1    GGLE01004226    MBY08352.1    AJVK01028707    GG666675    EEN44307.1    MLAK01000363    OHT14463.1    GDIP01170243    JAJ53159.1    GDIQ01193168    JAK58557.1    GDIP01210692    JAJ12710.1    CH916371    EDV92452.1    RJVU01062164    ROJ30481.1    CH933810    EDW06915.1    GG666612    EEN48817.1    JH712721    EFO13584.1    KQ971338    EFA02279.2    CH964291    EDW86484.1    GCES01122232    JAQ64090.1    GG666654    EEN45718.1    GL763054    EFZ20270.1    AEMK02000012    GECZ01005518    JAS64251.1    DQIR01118914    DQIR01120388    HDA74390.1   

Proteomes

UP000053240    UP000053268    UP000007151    UP000218220    UP000235965    UP000053097    + More
UP000007755    UP000078542    UP000002358    UP000078540    UP000008792    UP000005205    UP000215335    UP000092553    UP000075809    UP000095301    UP000078541    UP000002320    UP000001038    UP000076858    UP000078492    UP000092460    UP000092443    UP000008820    UP000000305    UP000037069    UP000095285    UP000242457    UP000007801    UP000000437    UP000005203    UP000000311    UP000069940    UP000249989    UP000242638    UP000001554    UP000265180    UP000092445    UP000028760    UP000265080    UP000092462    UP000095300    UP000264800    UP000192220    UP000001070    UP000009192    UP000261560    UP000265040    UP000007266    UP000007798    UP000261580    UP000265100    UP000008227    UP000286641    UP000261500   

PRIDE

I3LQ98   

Pfam

PF00096   zf-C2H2        + More
PF12774   AAA_6
PF08393   DHC_N2
PF12781   AAA_9
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF08385   DHC_N1
PF12777   MT
PF18408   zf_Hakai
PF16622   zf-C2H2_11

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR035699   AAA_6       
IPR013594   Dynein_heavy_dom-1       
IPR004273   Dynein_heavy_D6_P-loop       
IPR013602   Dynein_heavy_dom-2       
IPR042219   AAA_lid_11_sf       
IPR003593   AAA+_ATPase       
IPR027417   P-loop_NTPase       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR035706   AAA_9       
IPR042222   Dynein_2_N       
IPR041042   Znf_Hakai       
IPR041697   Znf-C2H2_11       

SUPFAM

SSF57667   SSF57667        + More
SSF56219   SSF56219       
SSF52540   SSF52540       

Gene 3D

3.60.10.10     1.10.8.720     1.20.140.100     3.20.180.20    

ProteinModelPortal

A0A1E1W727   A0A1E1W5P4   A0A0N1INQ6   A0A1E1W1D7   A0A194QC01   A0A212FNZ1   + More
A0A2A4J8I2   A0A2H1V421   A0A2J7R8T9   A0A026W0N5   F4X1T8   A0A293N6B4   A0A195C6U8   K7JIF6   A0A195BQT8   B4M1N4   A0A158NE70   A0A232EKY1   A0A0M4EYX7   A0A151X4G2   A0A1I8M7V6   A0A195ESD7   A0A1Q3EZY3   A0A0C9R2X4   B0X3D6   A0A0P5X794   H2L3B4   A0A0P5DXE8   A0A0P5CSF6   A0A0P5EBN9   A0A0P6BER7   A0A195D803   A0A0P4Y085   A0A1B0BBG6   A0A1A9XX04   Q1DGG6   E9HBN8   A0A0P6G936   A0A0L0C650   A0A0P6DY10   A0A0P5JZ41   A0A1I7VFB8   A0A0P5RZE7   A0A2A3EP55   Q16HM7   B3MWC0   A0A0G2KCQ2   A0A087ZRK1   A0A1E1XVP2   E2AX63   A0A182HAN9   A0A023G8V5   G3MR60   A0A1E1XCR0   A0A3P9N258   C3ZVG8   A0A3P9KP31   A0A1A9ZII5   A0A310SED6   A0A096MIS1   A0A1Z5L971   A0A3P8SL36   A0A2R5LFR9   A0A3P8SKP7   A0A1B0DA08   A0A1I8PMN1   A0A3Q3EFN0   C3ZSW2   A0A1J4KT44   A0A0P5CKN9   A0A0P5LKK6   A0A0P4ZYG2   A0A2I4BWN0   B4JP09   A0A3N0XT22   B4L2U8   A0A3B3CII4   A0A3Q1JGL8   C3ZDL1   A0A1S0TGT8   D2A389   B4NPP4   A0A3P8T634   A0A146R7X6   A0A1I7VFH7   A0A3Q4IGM4   A0A3B3CJB8   A0A3P8R4S9   C3ZNY3   E9IGU9   A0A287B1N6   A0A3Q7PLX8   A0A1B6GPA5   A0A286ZMW6   A0A3B3VEN3   I3LQ98  

PDB

2I13     E-value=5.12728e-11,     Score=159

KEGG

101742837    K09191 general transcription factor IIIA | (RefSeq) gastrula zinc finger protein XlCGF17.1-like

GO

GO:0003676   GO:0016021   GO:0007018   GO:0030286   GO:0005524   GO:0003777   GO:0008168   GO:0005634   GO:0045944   GO:0003700   GO:0043565   GO:0045893   GO:0045892   GO:0044212   GO:0005654   GO:0003677   GO:0046872   GO:0006468   GO:0005509   GO:0016020   GO:0006412   GO:0016876   GO:0043039  

Length:

202

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12217

outside

1  -  202

 

 

Pi

218.537591

Theta

178.180225

Tajima's D

0.599974

CLR

0.003992

CSRT

0.537873106344683

Interpretation

Uncertain