HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	9.6	8.3	0.02	1.2	1	21	10	30
2	14.1	2.0	0.00077	0.046	1	23	35	57
3	15.1	1.8	0.00038	0.023	1	23	62	84
4	24.8	2.3	3e-07	1.8e-05	1	23	92	117
5	10.3	6.3	0.013	0.77	1	23	122	144

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.02
                   EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHir 21
                   +kC++C k F + ++ ++H+r
  KWMTBOMO08005 10 FKCNKCFKEFITHYEKRKHMR 30
                   8*******************9 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 0.00077
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   y C++C+k F    ++++H + H
  KWMTBOMO08005 35 YICEECKKQFDKYNDFQKHKKEH 57
                   89******************999 PP

  == domain 3  score: 15.1 bits;  conditional E-value: 0.00038
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   y C++Cg sFk + + +rH+++H
  KWMTBOMO08005 62 YCCDKCGVSFKERILIVRHLKKH 84
                   88********************9 PP

  == domain 4  score: 24.8 bits;  conditional E-value: 3e-07
                    EEET..TTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                    ++Cp   Cg++++r+snLk+Hi t H
  KWMTBOMO08005  92 FPCPhkNCGRTYSRNSNLKQHILTkH 117
                    89*********************999 PP

  == domain 5  score: 10.3 bits;  conditional E-value: 0.013
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C++C+ + ++k  L++H++ H
  KWMTBOMO08005 122 HDCHICNTRLCSKAKLNNHLKLH 144
                    57*******************99 PP