SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07782
Pre Gene Modal
BGIBMGA000905
Annotation
PREDICTED:_protein_krueppel_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.743
 

Sequence

CDS
ATGCGTCAAGAATCTCTTCCGATGCTGGCGGAGAGACTGCTTGCAAGCCGCGCTGCCGCTCTGGTAGCAGGTCTACCGGCCGAGCTATACTCGGGTGCGCTACTGGCAGCGTGGCCTCCGTCGCCACCTACGCCCTTGCTTCCACCACCCGAACTGGATCGTACTCGTAAGCGACGTCGCACGCCTAAGCTCGATGACCAATCTACTGCACCACCTTCGCCACCGTCCTCAGGTTCTTCGCCTGGTGCAACCGACCCGCCCCGCGATAAGCTCTTCACCTGTAAAGTCTGTTCTCGTTCCTTTGGTTACAAACACGTTCTGCAAAACCACGAACGGACACACACGGGAGAAAAGCCGTTCGAATGCAGCGAATGTCACAAAAGATTTACTCGTGATCATCATCTTAAGACACATTTACGTTTGCACACCGGTGAGAAGCCCTACAGCTGCCCACACTGCCCTCGTCATTTTGTCCAGGTTGCTAATTTACGCCGCCACCTCCGTGTGCACACTGGAGAGAGACCATATGCTTGCACTCGTTGCCCTGCACGTTTTTCTGACTCTAATCAACTAAAGGCACATGCGCTAGTCCATGAAGGCGATGCTCCTTTTGCTTGCCGATGTGGTGCAAGATTCAGACGAAGACAAGCGGCTGCTTTACATCGATGTGCGAGCGCTGGATGCGAGCCCGACACTCCAAGTCCTCCGGTGGCAACTGCATCTGATTGGCGTTGGGACGAGTGGCCCGAGCAGACGGAGCCCGAGGATCTATCACTGCCGCGGCGACCGGCCACGCCGGATTCGCCGACCGACTTGCGCATGCACTCCGCGTAG
Protein
MRQESLPMLAERLLASRAAALVAGLPAELYSGALLAAWPPSPPTPLLPPPELDRTRKRRRTPKLDDQSTAPPSPPSSGSSPGATDPPRDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEGDAPFACRCGARFRRRQAAALHRCASAGCEPDTPSPPVATASDWRWDEWPEQTEPEDLSLPRRPATPDSPTDLRMHSA

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       
PDB
2I13     E-value=7.53492e-22,     Score=254

Ontologies

Topology

Length:
277
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.29341
Exp number, first 60 AAs:
2.29341
Total prob of N-in:
0.12006
outside
1  -  277
 
 

Population Genetic Test Statistics

Pi
263.092718
Theta
190.738791
Tajima's D
0.710175
CLR
0.065264
CSRT
0.579471026448678
Interpretation
Uncertain
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