HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.8	3.5	0.0001	0.0063	1	23	92	114
2	17.3	8.5	7.7e-05	0.0046	1	23	120	142
3	22.6	3.0	1.5e-06	9.2e-05	1	23	148	170
4	15.5	0.1	0.00028	0.016	1	23	176	198

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 0.0001
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C++C++sF  k+ L++H rtH
  KWMTBOMO07782  92 FTCKVCSRSFGYKHVLQNHERTH 114
                    89********************9 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 7.7e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C++C+k+F+r ++Lk+H+r H
  KWMTBOMO07782 120 FECSECHKRFTRDHHLKTHLRLH 142
                    89********************9 PP

  == domain 3  score: 22.6 bits;  conditional E-value: 1.5e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y Cp+C++ F +  nL+rH+r+H
  KWMTBOMO07782 148 YSCPHCPRHFVQVANLRRHLRVH 170
                    99********************9 PP

  == domain 4  score: 15.5 bits;  conditional E-value: 0.00028
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y C+ C+ +F+++ +Lk+H  +H
  KWMTBOMO07782 176 YACTRCPARFSDSNQLKAHALVH 198
                    88*****************9998 PP