Gene

KWMTBOMO07403

Annotation

PREDICTED:_zinc_finger_protein_62_homolog_[Bombyx_mori]

Location

Bomo_Chr12(-):12096904-12102944      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.396

CDS

ATGAACGTTATACACGGTGAAATTAAGTTCTTCTGTGATTATTGCTCTAAAGGATTCCGTTCTAAAACAAGTATAGCGGTACACATACTAAAGCATGAAACGCAGAAACACTTGTCGTGCGACTTGTGTGATTATAAAACCAAATACCATGCGGGACTACTATTACTAAAACACATGAAGAAACACAATCCAGAATCAATATATAAATGTCACAGGTGTCCGGCTGAGTTCAGAACGTCGAATGGATTGAAAGTGCACATCAACCGACACGAGAACAATAAGACGAAACACTGTGAATATTGTCCGGCTAAGTTTTATAGTGCCAGCGTACTGATCAAACATCGACGAACACATACAGGTGAAAGACCGTACGTTTGTAAAGTTTGTAGCAAAGCTTTCACCGGGAATCATAATTTAAAGCTCCACATGAGGGTGCACGGCGAATTCCTCATCAAAAAGAAAAACAAAGATGCTGATGTTGCCATAGTTTAG

Protein

MNVIHGEIKFFCDYCSKGFRSKTSIAVHILKHETQKHLSCDLCDYKTKYHAGLLLLKHMKKHNPESIYKCHRCPAEFRTSNGLKVHINRHENNKTKHCEYCPAKFYSASVLIKHRRTHTGERPYVCKVCSKAFTGNHNLKLHMRVHGEFLIKKKNKDADVAIV

Uniprot

H9JLC0   A0A3S2LWY4   A0A2A4K3D7   A0A2H1VU57   A0A212F3J6   A0A194PVK6   + More
A0A194R399   A0A146N7T1   A0A3Q1M6D6   A0A3Q1M093   A0A3P9L7W9   A0A3Q1M710   A0A146RKK5   A0A1B0FML5   A0A3P9N1D4   A0A3Q1CDT3   A0A1B0A0I6   A0A146TR31   A0A3P9JGE9   A0A146S7X9   A0A3P9L7W1   A0A3P9L825   A0A3Q2QLA4   A0A146PGX6   A0A3P9I3P3   A0A3P9L7M6   A0A3P9L7L6   A0A3P8T5H3   A0A146MNU7   A0A146TR82   A0A146MPM1   A0A1A9V7R5   A0A0S7HE36   A0A146TB74   A0A1A9W702   J9K8W0   J9JZH1   A0A3B5L0T0   J9K1V7   A0A3P9N1G6   A0A3B5L240   A0A3B3U0B7   B4M4L5   A0A2P8YWR9   A0A3B3U145   A0A3Q2UBW8   A0A3Q3WNH4   A0A146TT52   A0A2P6KW09   B4K4X5   A0A3Q1EH95   A0A3Q2PB36   A0A146P3U9   A0A3Q1EF03   A0A3Q1FZ90   A0A146MLT3   A0A3Q2PGK2   A0A146PC70   A0A146ZKX5   A0A087XTU2   J9LK98   A0A096MA90   K8ERI4   A0A3Q2PR02   A0A293LJ11   A0A3Q1EGK2   X1WXG3   C4A0V9   A0A146XP52   A0A3Q1EHM7   A0A3Q1G574   A0A3Q1EHM6   A0A0S7KDW3   A0A3P9PIF9   A0A3B4U3T7   A0A3B5Q0N4   A0A146S7N9   A0A3Q2UDR9   K8EDN6   B3M1B8   C3Y9P1   A0A3Q1EH18   A0A3B4XDL7   A0A3Q4AR88   A0A3B3DHG6   C3YJE3   Q4TA39   A0A3B4X3Y4   A0A3B4XHS2   A0A0L8FPS5   A0A3Q3VUK3   A0A146QKG7   A0A3P9JDZ6   A0A3P9HZ62   A0A293LQZ6   B3P0R5   A0A146QVC9   A0A3P9L4U5   A0A3P9L697  

Pubmed

19121390    22118469    26354079    19393038    17554307    17994087    + More
29403074    18563158    23542700    29451363    15496914   

EMBL

BABH01037164    BABH01037165    RSAL01000139    RVE46143.1    NWSH01000173    PCG78767.1    + More
ODYU01004476    SOQ44381.1    AGBW02010564    OWR48310.1    KQ459592    KPI96794.1    KQ460845    KPJ11999.1    GCES01158524    JAQ27798.1    GCES01117460    JAQ68862.1    CCAG010013986    GCES01090927    JAQ95395.1    GCES01109598    JAQ76724.1    GCES01143103    JAQ43219.1    GCES01165685    JAQ20637.1    GCES01090867    JAQ95455.1    GCES01165686    JAQ20636.1    GBYX01442215    JAO39173.1    GCES01096355    JAQ89967.1    ABLF02022170    ABLF02026391    ABLF02026398    ABLF02039181    CH940652    EDW59576.1    PYGN01000313    PSN48697.1    GCES01090405    JAQ95917.1    MWRG01004485    PRD30500.1    CH933806    EDW16128.1    GCES01147830    JAQ38492.1    GCES01165684    JAQ20638.1    GCES01144910    JAQ41412.1    GCES01019801    JAR66522.1    AYCK01011439    AYCK01011440    ABLF02020142    ABLF02020145    AYCK01001272    AYCK01001273    FO082262    CCO20554.1    GFWV01003081    MAA27811.1    ABLF02009721    GG666831    EEN41572.1    GCES01042463    JAR43860.1    GBYX01213516    JAO75050.1    GCES01109698    JAQ76624.1    FO082275    CCO16131.1    CH902617    EDV42145.1    GG666492    EEN63297.1    GG666520    EEN59542.1    CAAE01007452    CAF90243.1    KQ428131    KOF66410.1    GCES01129698    JAQ56624.1    GFWV01006204    MAA30934.1    CH954181    EDV48963.1    GCES01126525    JAQ59797.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000009136    UP000265180    UP000092444    UP000242638    UP000257160    UP000092445    UP000265200    UP000265000    UP000265080    UP000078200    UP000091820    UP000007819    UP000261380    UP000261500    UP000008792    UP000245037    UP000261620    UP000009192    UP000257200    UP000028760    UP000198341    UP000001554    UP000261420    UP000002852    UP000007801    UP000261360    UP000261560    UP000053454    UP000008711   

PRIDE

H9JLC0   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF05605   zf-Di19

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR017114   YY-1-like       
IPR017125   Znf_PRDM5-like       
IPR008598   Di19_Zn_binding_dom       
IPR016177   DNA-bd_dom_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF54171   SSF54171       

ProteinModelPortal

H9JLC0   A0A3S2LWY4   A0A2A4K3D7   A0A2H1VU57   A0A212F3J6   A0A194PVK6   + More
A0A194R399   A0A146N7T1   A0A3Q1M6D6   A0A3Q1M093   A0A3P9L7W9   A0A3Q1M710   A0A146RKK5   A0A1B0FML5   A0A3P9N1D4   A0A3Q1CDT3   A0A1B0A0I6   A0A146TR31   A0A3P9JGE9   A0A146S7X9   A0A3P9L7W1   A0A3P9L825   A0A3Q2QLA4   A0A146PGX6   A0A3P9I3P3   A0A3P9L7M6   A0A3P9L7L6   A0A3P8T5H3   A0A146MNU7   A0A146TR82   A0A146MPM1   A0A1A9V7R5   A0A0S7HE36   A0A146TB74   A0A1A9W702   J9K8W0   J9JZH1   A0A3B5L0T0   J9K1V7   A0A3P9N1G6   A0A3B5L240   A0A3B3U0B7   B4M4L5   A0A2P8YWR9   A0A3B3U145   A0A3Q2UBW8   A0A3Q3WNH4   A0A146TT52   A0A2P6KW09   B4K4X5   A0A3Q1EH95   A0A3Q2PB36   A0A146P3U9   A0A3Q1EF03   A0A3Q1FZ90   A0A146MLT3   A0A3Q2PGK2   A0A146PC70   A0A146ZKX5   A0A087XTU2   J9LK98   A0A096MA90   K8ERI4   A0A3Q2PR02   A0A293LJ11   A0A3Q1EGK2   X1WXG3   C4A0V9   A0A146XP52   A0A3Q1EHM7   A0A3Q1G574   A0A3Q1EHM6   A0A0S7KDW3   A0A3P9PIF9   A0A3B4U3T7   A0A3B5Q0N4   A0A146S7N9   A0A3Q2UDR9   K8EDN6   B3M1B8   C3Y9P1   A0A3Q1EH18   A0A3B4XDL7   A0A3Q4AR88   A0A3B3DHG6   C3YJE3   Q4TA39   A0A3B4X3Y4   A0A3B4XHS2   A0A0L8FPS5   A0A3Q3VUK3   A0A146QKG7   A0A3P9JDZ6   A0A3P9HZ62   A0A293LQZ6   B3P0R5   A0A146QVC9   A0A3P9L4U5   A0A3P9L697  

PDB

5V3G     E-value=7.46724e-16,     Score=199

KEGG

101735601    no KO assigned | (RefSeq) zinc finger protein 62 homolog

GO

GO:0003676   GO:0008270   GO:0005634   GO:0043565   GO:0045893   GO:0003700   GO:0045892   GO:0045944   GO:0003677   GO:0046872   GO:0006468   GO:0004672   GO:0005524   GO:0004714   GO:0007169   GO:0016020   GO:0003707   GO:0051537  

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09487

outside

1  -  163

 

 

Pi

22.076978

Theta

25.54532

Tajima's D

-1.20031

CLR

29.627985

CSRT

0.103194840257987

Interpretation

Uncertain