Gene
KWMTBOMO07161
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
Location in the cell
Nuclear Reliability : 3.112
Sequence
CDS
ATGTCTGGGGGGACATCACCCCCCATAATCAGCACCCCCGGCCCGTCCCGTAAGGGACGCCAAGTTATGACGAGTCTGAGATTCAGACCTTCACCAGCAACCCGTACAGTCTCGATGGGACTCGGGACGGACAGCCGGCCCGGGCCTCCGGTCGCGGCCCAGAGGACTCTGAGGATCGAACCGGAGGAAGATATCCTTCCCCCGTTGACCGATCCCTCTGGGCCCTCTCGGCCGCGGAAGAAGGCCAGGTCCGAGTCCGACCGAGGCTCATCGAGCGAAAAGGACAAGCGTCCAAGAATAGGCCCCTCGTCTAGATCGGAGGGAGAGGAGAGTGCGACCACGTCCTCTGCACATTCCTCAACCGAATCGGTCACTCCCTCCTCATCTAGGTCCTCGTCCCCCTCTGGGAGTCCAATCCCAGCCCAACCAATTCCGAAGCCTAGGGCTCCCGCCAGGACAGGGACAGCCCTAAGGCAAGTACGATCCCCTCCTCGCTCTCCTTCCCCAACGCTATCTCCAATCCCGGTAGACTCAACCCGAGGTGCCCCCGCCCTAAGCGGCACGGCGGGCAACCTGGACTCCACCAGGTATCCCTACCGCCCAGAGGACTTCCCAATCCTCACGAGTCCCTCCCCGAGGCCGAAGGGTCGCGCCCAGGAGGAACTGCGCCGACACCCGCCAATTATGGTGGAGGCCCTTCCAAATTGGTCCCGCCATATGGCGGCCATTAGGGAGCGCCTGGGCCGCGCACCCTCGGCGCGACCCTTCGGCGCCGGCTTTAGATTTCTGCCGACGTCGGCTGAGGAGTATAGGGCGGTCCAGGCCTACCTGTCGGAGGCCTCTGCCAGGGACGGTACCATTAAATGGTACTGCTACGCCCTGGCGGAGGAGATGCCTTCGAAGGTGGCGGTCCGGGGCCTCCCTGCCGACACCGACGAGGCAGAAATCATCAATGCCCTGAAGGAGCTGGGATTCCCGGCTCGATACGCCAGGTGCATTAGGTCCCAGAGAGGGCGTCCGGGATGCGTGTTTCACGTAGCCCTGGACCACCTCTCGAAGGACGACCTCGCCCGCTTGTACGCAGTCAACGAACTGCTGTACCTGCCGGGGGTGACGGTCGAGGGATGGCGTCCGATCCGAGGGCCTGCGCAGTGTCATCGCTGCCAGGCCTTCGGACACGCCTCCTACAACTGTCATCGTGCGGTCCGTTGCGTAAGGTGTGCCGGGGAGCACATCGTAGCGGACTGCCCGAGGCCGAGGGACGGCCCGTTTTCCTGCGCCAACTGCGGGAAGGACCATGCCGCCGTCGACAGACGGTGTGCGGTCTTCCGCAAGCGGGCCAGGATGATGGGAGTAACCGTCCCTCCTCCTGCCCCACAGGCGCCTCGGGCCGGGAGTACAGCTCTTCCGGCTTCAGTACCTGTAGCAAAAGGGAAGGGGAAGGGGAAAGGGAAAACTTCCCAGCCCCCTCCCTCTTCCCACTCCGCTCCGTCTGCGGTGGTGGTGGAGGCACTGCCATCGGCGTCTACGCTGATGGCACAGGCCAACCCGCCACGGCAGTCAATGAAAGTCCAACCTACTCCTGCTCCCCGTGGTCGCACTTCTGCTGGTGCTCCCACAATATCCCGTCCGACTAGCGGCATTACGACCCTAAACAAAAATAGGGAAAAAAACAGGAGGAAAAAACTAAAACGGAAAATAAGGAAAAGAGAGGAACGGGAGAATGCAAATGCAAACGGAGACATTCCGGTGCCTACAGTGCAGAATTCTGCACCACAACCAACCGACCCAGAGAACATGGAGGTCACAGAAAACTCCACTCCGGCCCATACGATACCAAGCCAACCATTGCCCTCGGCCCATTCGGCTGATGTGACCACTACTGCCAACATAAATAATTTGCCCCCCCTCCCCCCCCGCCCACAGCGCGAGCGGCGCAGCGGTCGGCAGGCCTCCCAGCCTGCCGGTTTTGCTGCCTGGCTGCTCACATTGTGGGAGAAATTGTCCGAGGAGCTGCGCATCATTTATTGGAACCCCGACGGGATAAAGTCCCGAAAGAACGACCTGCTTGTTCTCGCCCGGGAGTACAACCCAGAGGTTGTGCTCCTGGGCGAGACCAAGCTTCGTCCTCAGGATGCGTTCAGGATTCCTAACTATTTCATGTACCGACGTGACGAGCTTACCCCTGCCGGGCGGCCGTTCAGGGGCACTGCGGCCCTCGTCAGGCGGGACGTGGTGCATGATCAGTTGGATTTGCTGTCCTTCACATCGACAAGGTCAGTCGGTGTGAGGGTACACACCTCGGGGGGAGATATGCGGATTTATGCCGCGTATAGACCCCCGGGGCCTGAATTTCACCCTGAGGACATAAGACGGGCCCTGAATCACGACAGCCGCCCAGCCCTGCTGGTCGGGGACCTCAACGCGAAGCACGTCGCGTGGGGCTCCCGACTTAACTCAGCAGTGGGCAGGCGGCTGTTAGAAGATGCCGATAGGGGCGACTACTCTGTGGTCGGCCCCGACGAACCCACACACATCCCGACCGCCGCGCGCTATCAGCCCGATGTGCTGGATGTGTGTGTGCACAAGGGGCTACGGTGCCCCGTAACGATCGAGGCACTGTACGACCTGGGTACCCCACATCTCCCTGTCCTGGTGACACTGGGAATGGGGCTTACCCGGGTTGCGACCTCGCCCCTACGACCGAAGGTCGACTGGGAGCTCTTTAAGAGACGACTAGTCGACCTTCCCGTGATTCAGGACCCCAACACCCCTGATGGGGTCGACGATGCGGCAACCCGCCTTGTTGACTCCATCAGGGGAGCGATCGACCAGGCGACGACTCTTGTGCCCAGCGGCGGGCCCAGAGGTATACTCCCGGCCCATCTGAAGGCGAATATTCGCCGGAAGAGGGGCTTGAGGAGGCTCTGGGCGACAACTCGTTGTCCCAGGATAAAGCGCGAGCTTAATGAGCTGGAAGCGGAGCTGGCGACAAAGATTAGCACCTTTAGGGGCTATGCCTGGCAGGAGAGGATCGAGGAGGCCCGCGAGGACCCCTCTTCAGTATCCCTCCACCGGCTTTGTCGCCAGCTCTCAAATCGGCCTGCCCCGACTTGTCCACTCGTGGACGAGAGGGGCAACCGATGCTTCTCGGCTCAGGCCCGCGCCGATATCCTGGCCGAAATGCTGGAGCGGCAGTTCGCTCCTAATGACTCTGCACCCTCAGAGGCCGCATTCCACCAATCGGTGGAAGAGAGCGTAGCAAGCCTACTCTCCTCCCCGGTGCCACCGTTGGGAGATGGTGATCTCATCACTCCCAGCGAATTGCGCCTCATCATCAAGCGGATGAAGAGGCGCAAGGCGCCGGGCGAGGACGGTATTCCCTCCCTCGCTTTTTTCCACTTCCCTGAAACGGTCGTGTCATATATGACACGGCTGTTCAATTCCATTCTGTCCACAGGACACTTCCCGGGAATTTGGAAATTGGGCAAGGTTATCGCCTTGCCCAAACCCGGCAAGGACAGGAGAAATCCCTCCAGTTATCGTCCGATCACGTTGCTGTCGCACGTGGGCAAGTTGTTCGAGCGGCTGCTGCTGAGAAGGATGTCGCCGCACATCCTTCTCAGACCCGAGCAATTCGGGTTTCGTAGCGGTCACTCGACAACGCTGCAATTGGTCCGCGTCATGCATCACTTGGCGGATCGGTCCAACGCGCGCCAGTACACGGCCGCAGTCTTTCTCGATATCGAGAAGGCCTTCGACCGTGTCTGGCATGCGGGACTGATCCACAAGCTGTTGCAGAACACGGACCTCCAGCACGCCTACGTGCGACTGCTGGGGTCGTACCTGGAGGGAAGATCCTTCCTTGTCGCGGTCGAGGGCGCCAAGTCGTCGGTGCGCCCAGTCACGGCCGGAGTTCCGCAGGGGAGCGTCCTGGCACCATTCCTCTACGCTCTCTATACCAACGATATTCCCACGCTCGAGGGCAACCTACAAGCGTGGGAAGCCGACGTGAAGTTGGCGCTGTTTGCCGACGACAGCGCCTACTTCGCGTCATCCAACTTCCCCTCTGCGGCCATTTCGAGGATGCAGAGGTTATTGGACTTACTGCCCCAGTGGCTGGACCGATGGAGGGTCGCGGTCAACGTGGGGAAGACTGCGGCTATTCTCTTCGGTCCAGTCCGCACAACAGTCGTCCCGGGACAGCTCAGTCTCCGTGGCGCTAATGTCGAGTTTAGATCCAGCGTCCGGTACTTGGGGGTCGATATCGACCGGAGTTTGAGGATGACCGCCCACGCCATGTCGGCGTTGGCGGCAGCTCGCTATGCGAGATTCCTCCTCCGGCCGGTGTTGGCCTCCAGGTTGCCGGTCAGGACTAAGCTCGGCATTTATAAGACGTATGTCCGTTCCCGTATCACGTACGCAGCTGCGGCCTGGTATCACCTCATCCCGCAGGGTATGCGGGAGAGGTTACAGGTCCAGCAAAATCTGGCTCTTCGCACGATAGTCGGAGCAGGGCGTTACGTCAGAAATGACGTAATCGCCCGGGATCTAGATGTGGAGTCGCTCGAGGAGTTCATTCGGAGGCTAGCTCGTAATATGTACGAGCGGGCTGACGGTGGACCCCACGAGCATCTCCACAATATAGCTCCCTTGCACGCCAGACCACCTGATGGTAGGGCGCTACCAAGGGAGCTACTGGAACCCCCGGCTATGGTAAGATAG
Protein
MSGGTSPPIISTPGPSRKGRQVMTSLRFRPSPATRTVSMGLGTDSRPGPPVAAQRTLRIEPEEDILPPLTDPSGPSRPRKKARSESDRGSSSEKDKRPRIGPSSRSEGEESATTSSAHSSTESVTPSSSRSSSPSGSPIPAQPIPKPRAPARTGTALRQVRSPPRSPSPTLSPIPVDSTRGAPALSGTAGNLDSTRYPYRPEDFPILTSPSPRPKGRAQEELRRHPPIMVEALPNWSRHMAAIRERLGRAPSARPFGAGFRFLPTSAEEYRAVQAYLSEASARDGTIKWYCYALAEEMPSKVAVRGLPADTDEAEIINALKELGFPARYARCIRSQRGRPGCVFHVALDHLSKDDLARLYAVNELLYLPGVTVEGWRPIRGPAQCHRCQAFGHASYNCHRAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGVTVPPPAPQAPRAGSTALPASVPVAKGKGKGKGKTSQPPPSSHSAPSAVVVEALPSASTLMAQANPPRQSMKVQPTPAPRGRTSAGAPTISRPTSGITTLNKNREKNRRKKLKRKIRKREERENANANGDIPVPTVQNSAPQPTDPENMEVTENSTPAHTIPSQPLPSAHSADVTTTANINNLPPLPPRPQRERRSGRQASQPAGFAAWLLTLWEKLSEELRIIYWNPDGIKSRKNDLLVLAREYNPEVVLLGETKLRPQDAFRIPNYFMYRRDELTPAGRPFRGTAALVRRDVVHDQLDLLSFTSTRSVGVRVHTSGGDMRIYAAYRPPGPEFHPEDIRRALNHDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTHIPTAARYQPDVLDVCVHKGLRCPVTIEALYDLGTPHLPVLVTLGMGLTRVATSPLRPKVDWELFKRRLVDLPVIQDPNTPDGVDDAATRLVDSIRGAIDQATTLVPSGGPRGILPAHLKANIRRKRGLRRLWATTRCPRIKRELNELEAELATKISTFRGYAWQERIEEAREDPSSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADILAEMLERQFAPNDSAPSEAAFHQSVEESVASLLSSPVPPLGDGDLITPSELRLIIKRMKRRKAPGEDGIPSLAFFHFPETVVSYMTRLFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSSYRPITLLSHVGKLFERLLLRRMSPHILLRPEQFGFRSGHSTTLQLVRVMHHLADRSNARQYTAAVFLDIEKAFDRVWHAGLIHKLLQNTDLQHAYVRLLGSYLEGRSFLVAVEGAKSSVRPVTAGVPQGSVLAPFLYALYTNDIPTLEGNLQAWEADVKLALFADDSAYFASSNFPSAAISRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGPVRTTVVPGQLSLRGANVEFRSSVRYLGVDIDRSLRMTAHAMSALAAARYARFLLRPVLASRLPVRTKLGIYKTYVRSRITYAAAAWYHLIPQGMRERLQVQQNLALRTIVGAGRYVRNDVIARDLDVESLEEFIRRLARNMYERADGGPHEHLHNIAPLHARPPDGRALPRELLEPPAMVR
Summary
Uniprot
ProteinModelPortal
PDB
6AR3
E-value=0.000294812,
Score=110
Ontologies
GO
Topology
Length:
1574
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02005
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1 - 1574
Population Genetic Test Statistics
Pi
205.838602
Theta
197.852497
Tajima's D
0.597876
CLR
19.860914
CSRT
0.539673016349183
Interpretation
Uncertain
