Silkworm Genome Informatics Database

Gene

KWMTBOMO07110

Pre Gene Modal

BGIBMGA010420

Annotation

PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_24_[Bombyx_mori]

Location

Bomo_Chr12(-):4780228-4786861 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 3.736

CDS

ATGAACGGAAACAAAAGAAGAGAAAGAGACAGGGATGGCACTGTGAATATGGATAAAATGACGGAAGCTCAGAAAACGGCGTACCTTGAAGCTCACGTGGCTGTCCAACAGCATATGGCTCAGGCTGCTGCTGCAGCACGACGCGAACAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAACAACAACAGCAGCAGCAACAACAACAGCAGCAGCAACAACAACAGCAGCAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACAACAACAACAGCATCAACAACAACAACAACAACAACAGCAACATCAACAACAGCAAACTAATAATGCTAATAATCAAACAAGACATCATCAGGAATTGCAGCAACAAGCCCAAACCAACAACGCTCACCCAGGCCATCCGTCCCCTCCCACCGTTAGTTCGACTCAACATCATTACGCCACTATCAATTCACCGATCAAGGTCCCACAAGTTAGCTCCAGTACTGGCGGACCTGACAGTACTTTTACCGTACCTGATGATGTCGGTATGGGCTTCGAAGGAGGTGTTCGGGTACTGCAGAGCTTGGGTAATTGGTCACCGGAAGTAACAAATAATATTCCGAGACCTAATTTAATACCATTCACGGAACCGTATGCAGAAGGAGGCTCTATGCACCCCGGTACTAGGCTAAAGGTTTTACAAGGGACGACCGTTAGAAAACATCCCGCTATTAAAGCGACTAGTTCTACTACTGAAGGAACGAAAGCTTTTGAATGCACCGTTTGCGGTAAAGGCTTAGCACGCAAAGACAAGCTCACAATTCATATGAGGATACACACGGGAGAGAAACCTTACGTTTGTGAAGTTTGTAACAAGGCTTTCGCACGTCGGGATAAACTAGTGCTACATATGAATAAATTAAAACATATAACACCTTCTAATATTGCTCCTTTGGGGAAAAGAACCATTACGATACCACCATTGAAGTTAGACGATGTTAAGCCTCAACTACCGAAGCAGGAAGATACGAAGCCAAGCCAGGCAGAGATTGCGGCGGTGGCTCAACAACAACAGCAACAGCAGCATTCCCATCAGCAGCCGATACAGGTGTGCCAGGTACCTGGACACAACTTTACGAACACCAATTTGGTGCACACGAGTGCCACAACGGCGGCAGTGGCGGCCGCTACGGCTGGAATGGTGGTCTCGTGGTCCTGTGAGCTTTGCGGCAGATTGTTTGCAACTAGAGACGAATGGAGTGCACACGCAAAGTCCCATTTGCCTGATACTAAGTTATTGCAAGACAAGATGCAACAGGCAACGCAACATCAGCAACAAGAAAAGGTTCATTTATCGAACCAAGAGAAACTTCAGCTTCTACACCATCACAATCAGAACCAGCAGATACTAAATAGCCACGGCATCGCGACAGCGACCGTCTCCACCGCGACCGTCGTCAACGAGACTGGGGGAGGCGGAGGAGGGGGAACTTACTTCACTCACGGACACACACACTACGCTCCAGAACGAACTCAACACACACACGCACACCATTTATGTCTCATGTGTAGACAAGAGTTCGCCGGTAAAGCCGAGTTCATGTTCCACGTACGCGGCCATTTTGAAGGTAAAGTGAGTGACATAGCCGCGGCTGATGCTTTAGCGAGATCCCTGGTCGACAATTCGGGACTGTGTACCTGA

Protein

MNGNKRRERDRDGTVNMDKMTEAQKTAYLEAHVAVQQHMAQAAAAARREQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHQQQQTNNANNQTRHHQELQQQAQTNNAHPGHPSPPTVSSTQHHYATINSPIKVPQVSSSTGGPDSTFTVPDDVGMGFEGGVRVLQSLGNWSPEVTNNIPRPNLIPFTEPYAEGGSMHPGTRLKVLQGTTVRKHPAIKATSSTTEGTKAFECTVCGKGLARKDKLTIHMRIHTGEKPYVCEVCNKAFARRDKLVLHMNKLKHITPSNIAPLGKRTITIPPLKLDDVKPQLPKQEDTKPSQAEIAAVAQQQQQQQHSHQQPIQVCQVPGHNFTNTNLVHTSATTAAVAAATAGMVVSWSCELCGRLFATRDEWSAHAKSHLPDTKLLQDKMQQATQHQQQEKVHLSNQEKLQLLHHHNQNQQILNSHGIATATVSTATVVNETGGGGGGGTYFTHGHTHYAPERTQHTHAHHLCLMCRQEFAGKAEFMFHVRGHFEGKVSDIAAADALARSLVDNSGLCT

Uniprot

A0A3S2M120 A0A2W1BT63 A0A2H1WQM4 A0A212EYF0 A0A194PIK6 A0A2A4K5S8 + More
A0A0L7LFR6

Pubmed

28756777 22118469 26354079 26227816

EMBL

RSAL01000079 RVE48674.1 KZ149975 PZC75950.1 ODYU01010326 SOQ55353.1 + More
AGBW02011531 OWR46515.1 KQ459603 KPI92883.1 NWSH01000098 PCG79587.1 JTDY01001252 KOB74398.1

Proteomes

UP000283053 UP000007151 UP000053268 UP000218220 UP000037510

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A3S2M120 A0A2W1BT63 A0A2H1WQM4 A0A212EYF0 A0A194PIK6 A0A2A4K5S8 + More
A0A0L7LFR6

PDB

1LLM E-value=1.03889e-09, Score=153

KEGG

101742647 no KO assigned | (RefSeq) zinc finger and BTB domain-containing protein 24

GO

GO:0003676 GO:0008270 GO:0005634 GO:0046872 GO:0003824 GO:0005975 GO:0016616 GO:0030060 GO:0019752 GO:0016491 GO:0016295 GO:0016296

Length:

573

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.38601

Exp number, first 60 AAs:

0.00151

Total prob of N-in:

0.01888

outside

1 - 573

Pi

220.415246

Theta

179.557986

Tajima's D

0.775091

CLR

0

CSRT

0.6017199140043

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics