Silkworm Genome Informatics Database

Gene

KWMTBOMO06948

Annotation

PREDICTED:_uncharacterized_protein_LOC105842998_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(-):204239-207775 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.017

CDS

ATGGTGGAGGCCCTTCCAAATTGGTCCCGCCACATGGCGGCCATTAGGGAGCGCCTAGGCCGCGCCCCCTCGGCCCGACCCTTCGGCGCCGGTTTTAGATTTCTGCCGACGTCGGTTGAGGAGTATAGGGTGGTCCAGGCCTACCTGTCGGAGGCCTCTGCCAGGGACGGTACCATTAAATGGTACTGTTACGCCCTGGCGGAGGAGATGCCTTCGAAGGTGGCGGTCCGGGGCCTCCCTGCCGACACCGACGAGGCAGAAATCGTCAATGCCCTGAAGGAGCTGGGATTCCCGGCTCGATATGCCAGGTGCATTAGGTCCCAGAGAGGGCGTCCGGGCTGCGTGTTTCACGAAGCCCTGGATCACCTCTCGAAGGACGGCCTCGCCCGCTTGTACGCAGTCAACGAACTGCTGTACCTGCCGGGGGTGACGGTTGAAGGATGGCGTCCAACCCGAGGACCTGCGCAGTGTCATCGCTGCCAGGCCTTCGGACACGCCTCCTACAACTGTCATCGCGCGGTCCGTTGCGTAAGGTGTGCCGGGGAGCACATCGTAGCGGACTGCCCGAGGCCGAGAGACGGCCCATTCTCCTGTGCTAATTGCGGGAAAGACCATTCCGCCGTCGACAGACGGTGTGCGGTCTACCGCAAACGGGCCAGGATGATGGGAGTAACCGTCCCTCCTCCTGCGCCACAGGCGCCTCGAGCCGGGAGTGCAGCTCTTCTGGCATCTCAACCAGTACCAAAATGGAAGGGGAAGGGGAAAGGGAAATCTTCCCAGCCCCCTCCCCTTTCCCACTCCGCTCCGTCTGCTGTGGTGGTGGAGGCGTCGCCATCGGTGTCCACACTGACGGCACAGGCTAACCCGCCACGGCAGACAACCAAATCCAAGCCTACTCCTGCTCCCCGTGGTCGAACTACTGCTGCTCCATTGCCACAACAAAAACCTTGCCCGACTAGCGGTCTTACGATAACAAAAAACAGGGAAAAGAATAAACGCAAAAAATTGAAAAAAAAGGCAAGGAAAAAGGAAGAAAAAGCAAGAAGGGGCATACCAGAGCCTATAGTGCCGGATCCCCCATCGAGAACCCATGTCGAAACCATGGAGGTCTCTGAGGCCTCCCCACCAGCCCAATTATCGACAACAAGCCCGCAATTGCCTTCGGCCCATCCGGCCGAAGGGGCCGGGACGTACGGGCGTATTCTTACCCCTGCTGGGCGGCCGTTCAGGGGCACTGCGGCCCTTGTCAGGCGGGACGTGGTGCATGATCAGTTGGATTTGCTGTCCTTCACATCGACAAGGTCAGTCGGTGTGAGGTTACACACCTCGGGGGGAGATATGCGGATTTATGCCGCGTATAGACCCCCGGGGCCTGAATTCCACCCTGAGGATATAAGGCGGGCCCTGAATTACGACAGCCGCCCAGCTCTGCTGGTCGGGGACCTCAACGCGAAGCACGTCGCGTGGGGTTCCCGACTTAACACAGCAGTGGGCAGGCGGCTGTTAGAAGATGCCGATAGGGGCGACTACTCTGTGGTCGGCCCTGATGAACCCACGCACGTCCCGACCGCCGCGCGATACCAGCCCGATGTGCTGGACGTGTTTGACCCCAACACCCCTGAAGGGGTCGACGACGCGGCAGTCCGCCTTGTCGACTCCATCAGGGGAGCGATTGACCAGGCGACGACTCTTGTGCCCAGCGGCGGGCCTAGAGGTAGACTCCCGGCCCATCTGAAGGCGATCATTCCCCGGAAGAGGGGCCTGAGGAGGCTCTGGGCGACAACTCGTTGTCCCAGGATCAAGCGCGAGCTTAATGAGTTGGAAGCGGAGTTGGCGGCGAAGATTAGCTCCTTCCGGGGCTACACGTGGGAGGAACGGATTGAGGAGGCCCGTGAGGACCCCTCTTCTGTGTCCCTCCACCGACTTTGCCGCCAGTTCTCAAATCGGCCTGCCCTGACTTGTCCACTCCTGGACGAGAGGGGCAACCGATGCTTCTCGGCTCAGGCCCGCGCCGATGTCCTGGCCGCAATGCTGGAGCGGCAGTTCGTTCCAAATGACTCTGCACCCTCAGAGGCCGCATTCCACCAATCGGTGGAAGAGAGCGTAGCGAACCTACTCTCCTCCCCGGTGCCACCGTTGGGAGATGATGTTTTCATCACTCCCAGTTAA

Protein

MVEALPNWSRHMAAIRERLGRAPSARPFGAGFRFLPTSVEEYRVVQAYLSEASARDGTIKWYCYALAEEMPSKVAVRGLPADTDEAEIVNALKELGFPARYARCIRSQRGRPGCVFHEALDHLSKDGLARLYAVNELLYLPGVTVEGWRPTRGPAQCHRCQAFGHASYNCHRAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHSAVDRRCAVYRKRARMMGVTVPPPAPQAPRAGSAALLASQPVPKWKGKGKGKSSQPPPLSHSAPSAVVVEASPSVSTLTAQANPPRQTTKSKPTPAPRGRTTAAPLPQQKPCPTSGLTITKNREKNKRKKLKKKARKKEEKARRGIPEPIVPDPPSRTHVETMEVSEASPPAQLSTTSPQLPSAHPAEGAGTYGRILTPAGRPFRGTAALVRRDVVHDQLDLLSFTSTRSVGVRLHTSGGDMRIYAAYRPPGPEFHPEDIRRALNYDSRPALLVGDLNAKHVAWGSRLNTAVGRRLLEDADRGDYSVVGPDEPTHVPTAARYQPDVLDVFDPNTPEGVDDAAVRLVDSIRGAIDQATTLVPSGGPRGRLPAHLKAIIPRKRGLRRLWATTRCPRIKRELNELEAELAAKISSFRGYTWEERIEEAREDPSSVSLHRLCRQFSNRPALTCPLLDERGNRCFSAQARADVLAAMLERQFVPNDSAPSEAAFHQSVEESVANLLSSPVPPLGDDVFITPS

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842529 no KO assigned | (RefSeq) nascent polypeptide-associated complex subunit alpha, muscle-specific form

GO

GO:0003676 GO:0008270 GO:0016192 GO:0005484 GO:0006886 GO:0004317 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

722

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00092

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00015

outside

1 - 722

Pi

219.677059

Theta

153.439321

Tajima's D

1.261362

CLR

0

CSRT

0.736163191840408

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree