Silkworm Genome Informatics Database

Gene

KWMTBOMO06559

Pre Gene Modal

BGIBMGA011655

Annotation

PREDICTED:_protein_PFC0760c-like_[Bombyx_mori]

Location

Bomo_Chr11(+):10457965-10466539 View in EpiBrowser

Transcription factor

MYB

Location in the cell

Nuclear Reliability : 4.275

CDS

ATGGATGATGAAAACCTAGATGAAACAGTTTTTCTCACACGTTTTCGAAGCCCGTCCTTTACCAAAGAAGAAGTTATGCTAATATTGAATTTAATTGAGAAATACAAAGATGCCTTACTTAATAAACTGACTAGCTCGTTTGCAAGCCGTACCAAAGAAATTACCTGGATGAAAATAACGAAAGAGTTCAATAAACTGAACCCACGCCATATAAGAACCATGGAAAGTATTAAAATGAAGTGGGAAAACCTTAAGAGAGATGTAAGAAAACTATCAAACAATTTGTTGGACATAAACATTGACCAGTTGGATGAAGTAAAAAGTCGGGTCGTGTCAATGATGTGTGAAGCGGATAACAGGACTGAAGCTGCAAAATTAAACATTGACTTAAAATTAAATGATTTTGAAGAACAAGATGAAATTGTAACAAATGTGGCAGAAAATGAAACTTCAGCAACACATGAAGAAATATATTCTAACAATAGCAGTAGTTATGATGATGATGAGGGTGATATGACAAGATCTCAAAGAAGTCCAGGTTTTAGAAGAGATGAAATAATACTATTAATATCATTGATTGAGCAAAATCTGAATATAATCTTGGACAAAAGCACAAAAACAACAATAAATGTAGCCAAAGAAAAAACTTGGATGCAGATAGCTGAAATGTACAACAAACAGAACAAACAAAATAGAATCCAGCGCACTGGAAATCAGTTGAAAACGAAATGGGAAAATCTGAAGAAAATGGTGAAAAAATGTAGGAAAGGCTCTAAATATGACCAGCATGATTGGGATAGTATATTAGATAAGGTCATTGAAATAATATCGTTATCTGAAAATAAAAATAAGGAATTTGATCCTAATGAATCTAACTGTGAGTTTAACGAATTGGATGTATTGAATGGCCTGGATAATACCACAAACGGACATAGCTTTGAAGACAATATCTCTGATGATTATACAGCCAACAATGCTACCATAAGAGATAGAAAAAGTAAATTCTACGATACATCAAGAAAATTTTCACCTCACGAATGTAAATTGCTCATGCAATGTGTGAAACAAGAAAAGAAATCGATGGCTGTACCGAATTCGAAATCCAATAAATTTAAAAGTTTGGCTTGGATTAGGATAACTAAATCATACAACAGGCTGAGTCCTCAGAAGAGATCCACCAAAATGCTCAGAAGCAAGTTCAATAACTTGACGAGATTAGCAAGAAAGATTAGCTTCAAAGGTCCAATTGTGAATATGTACAAAAATCGTGGCTGTGGTAACGGGGACGATGGTCGCGAGTATATCGTAAAACGAGAGCCTTCCGAAAAAGACTATTCTGATCTCGATGAAATATGTGATGATGATAATGATGCAATCCCTCGCAACGATGACCACAATACTGTGAATGCAACGGATTTCATTCAGGACCCACTGATGACAGTTCTAAATGCGGATTCCGGTATAGATGTAACACAGACAGAAGACAAAGAGGTGACCAAGTTAAAAATAGAATTGTTGAGTTATAAAAGGGAAACTGCCAAGCTTGAAAGGAGAAGGATTGAGAATGCTATGGAATCGGATGCATTAGAAGCATCGTTGCGATTAAGGGCTGCTAGACTTGAAGCCGTCGCGGCCGCCACGAAGCTACCCCGATCCCACCCCGCCCTCGGATTCACCCCCGAAGAAGCTAGGGCCGAAGAATATCTGCTTCGGTATCAGAATACCTGA

Protein

MDDENLDETVFLTRFRSPSFTKEEVMLILNLIEKYKDALLNKLTSSFASRTKEITWMKITKEFNKLNPRHIRTMESIKMKWENLKRDVRKLSNNLLDINIDQLDEVKSRVVSMMCEADNRTEAAKLNIDLKLNDFEEQDEIVTNVAENETSATHEEIYSNNSSSYDDDEGDMTRSQRSPGFRRDEIILLISLIEQNLNIILDKSTKTTINVAKEKTWMQIAEMYNKQNKQNRIQRTGNQLKTKWENLKKMVKKCRKGSKYDQHDWDSILDKVIEIISLSENKNKEFDPNESNCEFNELDVLNGLDNTTNGHSFEDNISDDYTANNATIRDRKSKFYDTSRKFSPHECKLLMQCVKQEKKSMAVPNSKSNKFKSLAWIRITKSYNRLSPQKRSTKMLRSKFNNLTRLARKISFKGPIVNMYKNRGCGNGDDGREYIVKREPSEKDYSDLDEICDDDNDAIPRNDDHNTVNATDFIQDPLMTVLNADSGIDVTQTEDKEVTKLKIELLSYKRETAKLERRRIENAMESDALEASLRLRAARLEAVAAATKLPRSHPALGFTPEEARAEEYLLRYQNT

Uniprot

H9JQ49 A0A2A4JG48 A0A212ENT0 A0A2H1WXE4 A0A194QQK9 A0A194PX00 + More

Pubmed

19121390 22118469 26354079

EMBL

BABH01012131 BABH01012132 NWSH01001500 PCG71047.1 AGBW02013617 OWR43136.1 + More
ODYU01011788 SOQ57733.1 KQ461190 KPJ07255.1 KQ459590 KPI97289.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053268

PRIDE

H9JQ49

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR001005   SANT/Myb        + More
IPR028002   Myb_DNA-bind_5
IPR026753   NAIF1
IPR017877   Myb-like_dom

ProteinModelPortal

H9JQ49 A0A2A4JG48 A0A212ENT0 A0A2H1WXE4 A0A194QQK9 A0A194PX00 + More

KEGG

101740072 no KO assigned | (RefSeq) protein PFC0760c-like

GO

GO:0003677 GO:0005515 GO:0051536 GO:0016791 GO:0006812 GO:0015299 GO:0006419 GO:0015923 GO:0005634 GO:0006260

PANTHER

PTHR23098

Length:

575

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.00109

outside

1 - 575

Pi

225.708471

Theta

174.317397

Tajima's D

0.968866

CLR

0.097948

CSRT

0.649767511624419

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics