Gene

KWMTBOMO06455

Pre Gene Modal

BGIBMGA011610

Annotation

PREDICTED:_myeloid_zinc_finger_1_[Bombyx_mori]

Location

Bomo_Chr11(+):7603381-7610495      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.026

CDS

ATGACGCAGCCTTTTTTTTCTACCTATAAGCTGATAGCTTTGAGAGACTATGTCAGCTTGACCAGGCGATTAGATACGGCAGCACCGTACGTGTTATACAAGGATGGCGTTGAACGAGCTCCACCGGGCACACAGTGGGGCGGTGGAGTTCTGGACGGCGGCTACCAGCCCATGCAACACCAGAGCCCTGGTGGACCGTCCCCTCAGCCCGAACCGCAGTTAGCCTCTCCTGCGCCCTCGCCCTATCCACCGGCTCCTCCACCGCCGGACCCGACCGCGGCAGCAGAAGATGCAGCACAACAACTAGCTCAGCAACAAGCCCAGCAGCAGGCTCAACAACAACAGCAGCAGCAGCAGCAACAGCAGACGTCACCTGAACACATGCAAGTTGATCAACAACTACAGTCGCAGCCCCAACCGCAGCCTCCGCCGCAAGACCACCTTGATCGATCACCGTGCTTCATCCCGCAGCCCGATCTACAGCAACAGTATACACCGTACTTCAAAGAGACCAGACCGGCCAGTCATATGCTGAGTACCGGCGGCTTTCCGCTGCACTATTTAAAACAAAACGGTGGCGTCTTATCTTTGGAGGGTCCGCTCGATCAATACGGAGCGCCAGACCTCCGCCATTTGCCTGACATAGTTCAACCTGAACCTCCAAAGCCAAGGAAACACAACCCTAACTCAGAACTACGGCTGTTCAAGTGCTTGACATGTGGAAAAGACTTTAAACAGAAGTCGACTCTGCTTCAGCACGAGCGGATCCATACGGACTCGAGACCATACGGGTGTCCAGAGTGCGGCAAGCGGTTCCGGCAGCAGTCTCATCTGACGCAGCACCTGCGCATCCACGCCAACGAGAAGCCGTACGCATGCGTCTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGATGTATCACCGCATCTGATATTCAAGAACGGCACCACGCCGACTCTGTGGCCTCAGGATGTACCGTTTCCTCCCGACGAGAACAAGGAAGAGATCCAGTCGACTTTTGGAGATGCCGACGGGCAGAATGGAGAACAGCGAGGCTCATGTTTCTCACCGGGTGACACCGCTCAATATCCCGCCTACTTCAAAGATACGAAAGGCCTTAATCATACTGTGTTTGGGTCGGGTTTATCGTTGCAATATTTAAAAGGAGGAAAGCTTCCAGATGTCCTCGGCGGCCGCGCGATGCCTCTCTACGTACGTTGTCCTATCTGTCAGAAAGAGTTCAAACAGAAGTCGACTCTTCTTCAACACGGCTGCATTCACATTGAATCCCGACCATATCCGTGCCCTGAATGCGGCAAACGATTCAGGCAGCAATCTCATCTGACTCAGCATCTGCGAATCCACACAAACGAGAAGCCATATGGCTGTATTTATTGTCCACGTTTCTTCCGACAACGTACCATTCTCAACCAGCACCTGCGCATTCACACCGGAGAGAAACCCTATAAGTGCACGCAATGCGGAAAGGATTTCAGGCAAAAAGCAATTCTAGATCAACACACGCGAACTCATCAAGGCGATCGGCCGTTCTGCTGCCCAATGCCGAACTGTCGGCGGCGGTTTGCCACCGAACCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCAACAAAGGCGCGTCGGGCAGACACATCGAAGACGCCCCGCCCGCTGCCGCCAGCCGCCGCCGTGGTCAAACCAGAGCTGTACTTCCCGCAGTGCTACGCGCCACCGTTCCAGCAATTCCCGACGAGCGGAGAGTTCAAGCCGGCGGTGGGCGGCGCGTGTCTGCCGGCGCAGTGA

Protein

MTQPFFSTYKLIALRDYVSLTRRLDTAAPYVLYKDGVERAPPGTQWGGGVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPTAAAEDAAQQLAQQQAQQQAQQQQQQQQQQQTSPEHMQVDQQLQSQPQPQPPPQDHLDRSPCFIPQPDLQQQYTPYFKETRPASHMLSTGGFPLHYLKQNGGVLSLEGPLDQYGAPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSDVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCIYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHATKARRADTSKTPRPLPPAAAVVKPELYFPQCYAPPFQQFPTSGEFKPAVGGACLPAQ

Uniprot

H9JQ05   A0A212ELV8   A0A194PWR2   A0A0N1IAE5   A0A2A4KAH7   A0A1W4XJM0   + More
A0A0C9RC52   A0A1Y1NF15   A0A158NGU2   A0A1B0CT36   A0A1W4X960   A0A0C9RMB8   A0A2J7QH01   A0A026W9Q6   K7IZU3   A0A2J7QH03   A0A067R7W3   A0A2H1WTH1   A0A088ARF5   U4UFD4   A0A0N1ITX9   A0A1B6H7I5   U4UHC0   B0X6C5   E0VAN3   T1HB77   J9JRC7   A0A151XD25   A0A195B6V3   A0A195FEM3   B4N539   A0A182QEZ1  

Pubmed

19121390    22118469    26354079    28004739    21347285    24508170    + More
30249741    20075255    24845553    23537049    20566863    17994087   

EMBL

BABH01012361    AGBW02013978    OWR42463.1    KQ459590    KPI97199.1    KQ460391    + More
KPJ15402.1    NWSH01000006    PCG80986.1    GBYB01010692    JAG80459.1    GEZM01003852    JAV96524.1    ADTU01015218    ADTU01015219    ADTU01015220    AJWK01027024    AJWK01027025    AJWK01027026    AJWK01027027    GBYB01011887    GBYB01014537    JAG81654.1    JAG84304.1    NEVH01014359    PNF27864.1    KK107314    QOIP01000012    EZA52837.1    RLU16279.1    PNF27866.1    KK852879    KDR14456.1    ODYU01010947    SOQ56375.1    KB632165    ERL89296.1    KQ435726    KOX78194.1    GECU01037125    JAS70581.1    ERL89295.1    DS232410    EDS41275.1    DS235012    EEB10439.1    ACPB03015802    ABLF02030623    ABLF02030626    KQ982294    KYQ58220.1    KQ976574    KYM80226.1    KQ981625    KYN39130.1    CH964101    EDW79478.1    AXCN02002037   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000218220    UP000192223    + More
UP000005205    UP000092461    UP000235965    UP000053097    UP000279307    UP000002358    UP000027135    UP000005203    UP000030742    UP000053105    UP000002320    UP000009046    UP000015103    UP000007819    UP000075809    UP000078540    UP000078541    UP000007798    UP000075886   

PRIDE

H9JQ05   

Pfam

PF00096   zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR020467   K_chnl_volt-dep_Kv1.4       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JQ05   A0A212ELV8   A0A194PWR2   A0A0N1IAE5   A0A2A4KAH7   A0A1W4XJM0   + More
A0A0C9RC52   A0A1Y1NF15   A0A158NGU2   A0A1B0CT36   A0A1W4X960   A0A0C9RMB8   A0A2J7QH01   A0A026W9Q6   K7IZU3   A0A2J7QH03   A0A067R7W3   A0A2H1WTH1   A0A088ARF5   U4UFD4   A0A0N1ITX9   A0A1B6H7I5   U4UHC0   B0X6C5   E0VAN3   T1HB77   J9JRC7   A0A151XD25   A0A195B6V3   A0A195FEM3   B4N539   A0A182QEZ1  

PDB

5WJQ     E-value=3.69843e-33,     Score=356

KEGG

101743328    no KO assigned | (RefSeq) myeloid zinc finger 1

GO

GO:0003676   GO:0016021   GO:0046872   GO:0005388   GO:0006816   GO:0004813   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

Length:

613

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00049

outside

1  -  613

 

 

Pi

216.057792

Theta

168.727539

Tajima's D

0.825487

CLR

0.068143

CSRT

0.606669666516674

Interpretation

Uncertain