Gene

KWMTBOMO06288

Pre Gene Modal

BGIBMGA001614

Annotation

PREDICTED:_zinc_finger_protein_57-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr11(-):4018932-4036060      View in EpiBrowser

Full name

Zinc finger protein 57      

Alternative Name

Zinc finger protein 424

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.529

CDS

ATGTTTCTAAATTCACCGAAGGATTTAACAAAACATGCGACTTCGCGACTGGTTATGACCCCAATGGAGCTCACAACAATACAAGACAATAACAGTAATCTGTCGAATGAAGTTCACGTGAAAATTGAACGTGAGAATGGTGATGCATTTGTTGAACCTGATGCATTGCTGAACGAAGAATTGAAACTGGAAAAAGATCAAGAGGAAGATTATGCAGATGATTTTCAATCTCAAGACGCTGGAGTCTCGTCCGAGGAAGACGTCAATCTTTTGTTGTTAAAAGAGGAGAAGGAAAAGCAGGAAAAGAAAAAGAGAAAGAAGAATAGAAAAATGGCAAAACCTGAGAAAAAAGAAAAAATATCCCGCAAATTGAAGAATCTACCCGTGAACCAAGTTGAACTGTGTCACATGCAAGAAAGCGAAATGTGGGTAGTGAGAAAAAATGATGTCGAGAACGAATACTTTCAATCGTTGAAGTATAAGTGCTCTGACTGTCTAATCGGCTTCAACACGGCGAGGCTCATGTGTGATCATATGGAAGGAAAGCACAGACCTAAGGGCGCCGGCAGCCACAAGTGCGACGTGTGCAACGTTTATCTGCTCACGAAAGACAATTTACTGCTGCACAGGTCCTTGCACCAGATCGCGTATATGTGTGTTAAGTGCGCCTACAAAACAACCGTCAAGAAGATTATGTCGAAGCATCTTTATACCCACAACGAGGGTATGAAGGAAGAATACGTCTGTTCGATTTGTGGCAGCGAATTCGGGACAAAATCGAAATTGAATTACCACAAAGCGGCTTGGCATCAGGAGAAGCCACAGTGCGACTGCTGCGGTAAAGTCTTCGCCAGTAAGATGACATTAAAATATCATTTAAGAGTAGTGCCTCAAAATAAAGAGGAGAAGCCGAAGGAGAAACTGTATATACCGTGCAAAGGATGCAGCAAGGTGTTCCACTCGAAGAAAAGCTACAGGGCTCATGCGGTGGTGCATTCGGGGATGACGTATCCGTGCCCGATATGCGGGAAGCTGTTCCAGTGGAAGCGGAACCTGGCCCGCCACACGAGGAACCACCGCGAGAAGGACACGGGCGCCGTGTACGAGTGCCGGGAGTGCAACAAGACCTTCGCCAGCCGCGACTGCTACGCCAACCATCTTAGGCTGAGCAAGAAGCACGCCCCGCCAGATTCCTACGTTCACGAATGCAGTTTCTGTGGTAAGAAGTTTGCAACTAAATGGTGTATGGTCGACCACGTGGACTGGGAACATTTGAAGATCATAAAATATCAGTGCAGCGTTTGTTTTAAGGCTTTCAAAACTTCCAAAATATTAGTGGCCCACGTCAATAATATTCACGGCGGCAAAAAGAAGGAGGAGGAAAGCGAACGTCTCTGTGATATCTGCGGGAAGTCTTATAAGACAGAGAAACGACTCAAAGGCCACGTTTGGGCGATGCACACGAAGAGGTCTACGGCCAAGAGCTTCAAATGCAAACTCTGCCCGGCCACATTCACATGGCAGACCTCAATATACAAGCACATGAAGATGATGCACGACAGCAAGAGGAACAAGGTGAGGTCATAA

Protein

MFLNSPKDLTKHATSRLVMTPMELTTIQDNNSNLSNEVHVKIERENGDAFVEPDALLNEELKLEKDQEEDYADDFQSQDAGVSSEEDVNLLLLKEEKEKQEKKKRKKNRKMAKPEKKEKISRKLKNLPVNQVELCHMQESEMWVVRKNDVENEYFQSLKYKCSDCLIGFNTARLMCDHMEGKHRPKGAGSHKCDVCNVYLLTKDNLLLHRSLHQIAYMCVKCAYKTTVKKIMSKHLYTHNEGMKEEYVCSICGSEFGTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKTFASRDCYANHLRLSKKHAPPDSYVHECSFCGKKFATKWCMVDHVDWEHLKIIKYQCSVCFKAFKTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKVRS

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Complete proteome   DNA-binding   Metal-binding   Nucleus   Polymorphism   Reference proteome   Repeat   Transcription   Transcription regulation   Zinc   Zinc-finger  

Feature

chain  Zinc finger protein 57
sequence variant  In dbSNP:rs2288958.

Uniprot

H9IWI2   A0A2A4K834   A0A2A4K6F4   A0A0N0PCK0   A0A0N1ICW2   A0A212F2L2   + More
A0A2W1BRP1   A0A194Q537   A0A2I3HD63   A0A2I3GCI3   A0A2J8J2W2   A0A212F479   A0A0A0MWA1   A0A2I3LRP3   H2REK2   A0A2J8J2W0   H2QEX6   A0A2K5NKU0   A0A2K5NKF4   A0A2K5NKT0   A0A087WUM7   A0A3B5MAJ1   A5HJR3   Q68EA5   K7E1Y6   B4DXX0   G3V131   A0A2K6P4I3   A0A2K5XIM1   A0A0D9RGB2   A0A2K6N5E5   A0A2K5VLF6   A0A2K5XIM7   A0A2K5VLD9   G3VG05   A0A2K5VL69   G3RMR5   A0A0L8GXU3   A0A1D5RH92   G3QTW4   A0A3Q3VW31   A0A2K6BUZ9   A0A2K6BV06   A0A1E1W6H5   A0A2K6BUY8   A0A2K6BV28   A0A2K6BUZ2   A0A384C308  

Pubmed

19121390    26354079    22118469    28756777    16136131    15057824    + More
11181995    17974005    15489334    17495919    25362486    21709235    22398555    17431167   

EMBL

BABH01021323    BABH01021324    BABH01021325    BABH01021326    NWSH01000080    PCG79820.1    + More
PCG79821.1    KQ460555    KPJ14021.1    KQ458486    KPJ05870.1    AGBW02010726    OWR47974.1    KZ149995    PZC75450.1    KQ459463    KPJ00474.1    ADFV01098915    ADFV01098916    ADFV01098917    ADFV01098918    ADFV01098919    NBAG03000531    PNI17105.1    AGBW02010415    OWR48546.1    AHZZ02013168    AHZZ02013169    AHZZ02013170    AHZZ02013171    AACZ04058062    PNI17104.1    PNI17106.1    AC119403    EF534355    AK314848    CH471139    ABQ10558.1    BAG37365.1    EAW69355.1    BX537601    BC028974    AK302165    BAG63532.1    EAW69356.1    AQIB01150271    AQIA01033538    AQIA01033539    AQIA01033540    AQIA01033541    AEFK01138105    AEFK01138106    CABD030110760    KQ420065    KOF81410.1    JSUE03020218    JSUE03020219    JSUE03020220    JSUE03020221    GDQN01008479    JAT82575.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000001073    + More
UP000028761    UP000002277    UP000233060    UP000005640    UP000261380    UP000002280    UP000233200    UP000233140    UP000029965    UP000233180    UP000233100    UP000007648    UP000001519    UP000053454    UP000006718    UP000261620    UP000233120    UP000261680   

PRIDE

H9IWI2    Q68EA5    B4DXX0   

Pfam

PF00096   zf-C2H2        + More
PF01352   KRAB
PF05605   zf-Di19

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR017114   YY-1-like       
IPR012934   Znf_AD       
IPR008598   Di19_Zn_binding_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9IWI2   A0A2A4K834   A0A2A4K6F4   A0A0N0PCK0   A0A0N1ICW2   A0A212F2L2   + More
A0A2W1BRP1   A0A194Q537   A0A2I3HD63   A0A2I3GCI3   A0A2J8J2W2   A0A212F479   A0A0A0MWA1   A0A2I3LRP3   H2REK2   A0A2J8J2W0   H2QEX6   A0A2K5NKU0   A0A2K5NKF4   A0A2K5NKT0   A0A087WUM7   A0A3B5MAJ1   A5HJR3   Q68EA5   K7E1Y6   B4DXX0   G3V131   A0A2K6P4I3   A0A2K5XIM1   A0A0D9RGB2   A0A2K6N5E5   A0A2K5VLF6   A0A2K5XIM7   A0A2K5VLD9   G3VG05   A0A2K5VL69   G3RMR5   A0A0L8GXU3   A0A1D5RH92   G3QTW4   A0A3Q3VW31   A0A2K6BUZ9   A0A2K6BV06   A0A1E1W6H5   A0A2K6BUY8   A0A2K6BV28   A0A2K6BUZ2   A0A384C308  

PDB

5V3M     E-value=3.83686e-15,     Score=200

KEGG

101735681    no KO assigned | (RefSeq) zinc finger protein 57-like

GO

GO:0003676   GO:0046872   GO:0006355   GO:0000981   GO:0005634   GO:0003677   GO:0008270   GO:0016787   GO:0008235   GO:0019538   GO:0030145   GO:0015923   GO:0006260  

Subcellular location

Nucleus  

Length:

528

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01134

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00091

outside

1  -  528

 

 

Pi

197.677626

Theta

175.09929

Tajima's D

1.400353

CLR

0.81344

CSRT

0.761261936903155

Interpretation

Uncertain