Silkworm Genome Informatics Database

Gene

KWMTBOMO06276

Pre Gene Modal

BGIBMGA001621

Annotation

PREDICTED:_myoneurin-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(-):3683147-3706245 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.956

CDS

ATGGCCCTATGCGAGAGCCAGCTTGACTCTGGCCTGGGAAAGCTGAAAAGGGAAGGTAAATCTGCCGAAGTGCCCAAGGACTCGCCAGAGAAGAGACTGAAAATGGATCATAATGGAATTTATAATTTGGATCAAGTGCCTGCTGGTTTGCCGGGGGGTCTGCCGCTCAGTGTCGATTACCGATCGCCTGTCTCTCACTTCGTTCCGCCAGCCGTCGAGCTTTACGCGGCAAGGCACAAACAGGAAGCCATGCATGCACAGTCGAGCGTGACTACTACAACACCGATGAAAAGAAAACGCGGCAGACCGAGAATCGACAAATCAAGCCCGGAGTATTTAGCTAATTTAGCCGCGAGAAAGCAGGCTAGAGAAATGGCCGCAATGATGAACAGCAGCCGTCAGCCTTCAGAGCCGGGCGAGAAACGGAAGCGGGGTCGGCCCAGAGTCGATAAGACCAGTCCCGAATATTTAGCCAGGAAAAGGGTTAGGGAACTGGAAGCTCTCGATCGTAAAGCTAAAAAGGAGCACAAAAGACGCACCGGCGGCGCAGCGAAAAGTCTACCACGAAGCGTCAAAACTTCGACAAATCGCCTACCAAAAAACGTACAAAAAAACAACATGGCCGTCAGCGTTAGAAAACTGCAACAGAAACTGGTTAGAAAGATTGCCGATAAAAAGATTGTAATGCGGAGAAATTCGAAATATATGAAAAGAAAAGATTCGGCCACGTCTTCGTCCACGGGCGAGTTGATCCCGAAAGCGAAGCGCAAATACACAAAGCGAACGCCCGACTCGAAGAAAGAATCTAACACAACGGATAAAGTGAAGGGAAAACGCGGAAGGCCGAGGAAAAGCGAGCAGGTGTCGGCAAATAACAAACAAATGCCACAAGCAAAAATAAGAGTGAGGAGTAACCTCATGCCGGACAGTTCCGAACCCATCAATTTGGACAGCGACGAAGAGCCCGATCTGGGATCCCCGAGCCAAACCTCAGATTCTCTGAGCCTGGATGAGAATCTACGCGCCCTAAGGCACATACACGAGAAATACGCCAACATCGATAAGGACGACCTGTACGAAGCACACTTGTTGGCGGCGAACTTCAAGAAACCTTCCCAGGACTCCGGTCAGAGGAATCGTGATGATGACGACGTGCTATCCATCAGAAGCTCCGATGGGAACGGTTCCGTGAAGGACCTGGACTCGAGGGTCGAGAAGCTGGAGGACGGCTCCGACTCGGACACGGGCAGCACCAGCTCTGGCTCCGGCTCGTCAAGCTCCGGATCCAGTTCGTCGTCGAGCTCCGGAAGCTCCAGCTCATCAGACAGCTCCGATTCGGACTCGGGGTCTGAAGACGAGAGGCCCAAAGAGGAGCAGCCTCCGATGGCTCACAACGAGGACGACAGCCGGTCGTTCGGTGCGTGGTCGCACAGCGGGCCGGCGTCCGACTCGGACACGGATCCGGAGCGCGCGGCGGACGTGCCTCCCCCGCAGGAGAACGACGTCAGCGAGAGCGAGAACGAGTCGCCGGACAAGAGCTTCCAGTGCCACATATGCCGGAAGTGGTATTCCACGAAGGTCACGTTAAAAATACACAGACGCAGCCACCAGAACAGGGGAGGAGGAAACTCTAGGTCCAGGACCCGTTCCTCAGACAGATACGAGTGTGACTGCTGCAACGAGACGTTCAATAGACGCGAAAAACTATGGGAGCATAAGGCTGAAGCTCACCGCGGCTCCATGACGGTCCGCTGCGAGGTGTGCAGGAAGTGCTTCGAGGACGACTCCGAGTTGGCGGCCCACGACCGCACGCACACGGACGACGAGCGAGCCGGTAGATGCGGGGAGTGCGGGGCCACGTTCCAGCGGTACGAGCAGCTGCGCCGGCACCGCTCGTGCGCGCACGGCGCCGCGCCCGACGGCATGCCGCACGCCTGCGCGCAGTGCGGCAAGCGGTTCTCGCACGCGCACTCGCTCACACGCCACCTGCACAACCACGCCAAGCAACTGTACCGCTGCGTCGTGTGCAAGGCATCGTTCGCGCGAGCCGACCAGCTGGCGCAGCATCTCAACAGTCACTTGGCCAACTACAAGCGGTTGAAACCTTAA

Protein

MALCESQLDSGLGKLKREGKSAEVPKDSPEKRLKMDHNGIYNLDQVPAGLPGGLPLSVDYRSPVSHFVPPAVELYAARHKQEAMHAQSSVTTTTPMKRKRGRPRIDKSSPEYLANLAARKQAREMAAMMNSSRQPSEPGEKRKRGRPRVDKTSPEYLARKRVRELEALDRKAKKEHKRRTGGAAKSLPRSVKTSTNRLPKNVQKNNMAVSVRKLQQKLVRKIADKKIVMRRNSKYMKRKDSATSSSTGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGSPSQTSDSLSLDENLRALRHIHEKYANIDKDDLYEAHLLAANFKKPSQDSGQRNRDDDDVLSIRSSDGNGSVKDLDSRVEKLEDGSDSDTGSTSSGSGSSSSGSSSSSSSGSSSSSDSSDSDSGSEDERPKEEQPPMAHNEDDSRSFGAWSHSGPASDSDTDPERAADVPPPQENDVSESENESPDKSFQCHICRKWYSTKVTLKIHRRSHQNRGGGNSRSRTRSSDRYECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFARADQLAQHLNSHLANYKRLKP

Uniprot

A0A3S2L749 A0A194Q4D2

Pubmed

26354079

EMBL

RSAL01000109 RVE47190.1 KQ459463 KPJ00402.1

Proteomes

UP000283053 UP000053268

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR017956   AT_hook_DNA-bd_motif

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A3S2L749 A0A194Q4D2

PDB

2I13 E-value=5.4857e-14, Score=191

KEGG

101745271 no KO assigned | (RefSeq) zinc finger protein 205-like

GO

GO:0003677 GO:0046872 GO:0003676 GO:0016787 GO:0008235 GO:0019538 GO:0030145 GO:0015923 GO:0005634 GO:0006260

Length:

702

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00043

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.00014

outside

1 - 702

Pi

183.859859

Theta

163.613461

Tajima's D

-0.779099

CLR

0.886458

CSRT

0.177291135443228

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics