Gene

KWMTBOMO06192

Pre Gene Modal

BGIBMGA001660

Annotation

PREDICTED:_zinc_finger_protein_62-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr11(-):2090666-2102050      View in EpiBrowser

Full name

Zinc finger protein 57       + More
Zinc finger protein      

Alternative Name

Zinc finger protein 424

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.522

CDS

ATGAAAGAGGATGGCTGGAACCTTGAGCTTGTCGGCGGACGTGAAGAGATGAAAAAGGATGGCTGGATCCTTGAGCTTGTCGGCGGGATCAGATTGATGGTGATAGAGTTATCTGACGCCGAGCTAGGGGCTGAGAGGGAGAGGGCCATCCGCGACCCTAGATACACAAAGAAGTCGTACAAATGTCAGAAATGTATAATCTCATACGACCACGCCATTAACTTGGACAGGCATTTGACACTCAGCCATAATGAGAATAACGCACACGTGTGCGACGTATGCGAATGTACTTACGACACAGAATCGAAAGTCAGAACTCACACGAAGAGACATTATTTGAGGTACAAGTGTATGGAATGCGATAAGTTGTACCAGGACAAACAAACAGCCGTTGTGCACTACAAAGAAGCACATACGGTCAATCGGAAGATATACAGATGCGATCTGTCGCACTGTCGCTTCGAGACTGCCTCTCACAGAAGCTACAAATATCATCAAGCGAAACACAATCAAGTTAAATGCTCTTTATGCGACGGAATGTACTTGCAGGGGACCCAATTGAGGATGCATATCAACACCGTCCACAAAAACGCATCGCAATTCAAGTGCGAGTCGTGCGATAAGGTCTACAAGCACCGGGCAGGGTTGCGCGCGCACGTGAGGTCGGCACACGAAGCGAACAACGAGACGTCTCATTACTGCGGCCCTTGTTGCAAATTCTTCAGCACCGCCTCCACGCTGGCCCAACATCTGATCGAACATTCGAAGCATGTCGGCAAAAAATACGTTTGCGATGATTGCTCAAAGAGATACTCCACGAAGCGCTTCCTGAGACAACACATAGAAACGGCACATTTGAAGCTCAAACCCGATTACAAGTGCACGATTTGCGATAAGATCTTCAATACGTCGTTCACGCTCAGAAGACACGTGGAGTTTAAACACGAGAAAAAAAAGTTGCCTCGCGATAAAATCTGCGAACATTGCGGACGCGGGTTCATGACGAACAAAATACTGAGTTCGCATATACGCACGCACACCGGCGAACGGCCGTACGTGTGCCAGCTCTGCGGCGCGACTTTTGGCCACTCGGGCGCGATGTACACCCATAAAAGGTTACTGCACGGCTTAAAAAAACGTAAAGGAAGCTAG

Protein

MKEDGWNLELVGGREEMKKDGWILELVGGIRLMVIELSDAELGAERERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNENNAHVCDVCECTYDTESKVRTHTKRHYLRYKCMECDKLYQDKQTAVVHYKEAHTVNRKIYRCDLSHCRFETASHRSYKYHQAKHNQVKCSLCDGMYLQGTQLRMHINTVHKNASQFKCESCDKVYKHRAGLRAHVRSAHEANNETSHYCGPCCKFFSTASTLAQHLIEHSKHVGKKYVCDDCSKRYSTKRFLRQHIETAHLKLKPDYKCTICDKIFNTSFTLRRHVEFKHEKKKLPRDKICEHCGRGFMTNKILSSHIRTHTGERPYVCQLCGATFGHSGAMYTHKRLLHGLKKRKGS

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Complete proteome   DNA-binding   Metal-binding   Nucleus   Polymorphism   Reference proteome   Repeat   Transcription   Transcription regulation   Zinc   Zinc-finger  

Feature

chain  Zinc finger protein 57
sequence variant  In dbSNP:rs2288958.

Uniprot

A0A2W1BK83   A0A3S2L580   A0A194QRA1   A0A212FA07   A0A0N1IE69   A0A0N0PE54   + More
A0A0N1IGS5   A0A2A4JMU5   A0A3S2NQN3   H9IWZ4   A0A2A4JGB7   A0A0N0PBL1   A0A212F827   A0A3S2NF42   A0A2H1W7Z1   A0A3S2NV19   A0A2H1WUB2   X1WX70   A0A0N1ICJ9   S4PJM9   A0A2A4K9P1   A0A2I3GCI3   A0A2J8J2W2   A0A2I3HD63   H2REK2   H2QEX6   A0A087WUM7   A0A2J8J2W0   A0A2K5VLF6   B4DXX0   A5HJR3   Q68EA5   A0A2K5VLD9   G3V131   A0A2K5VL69   A0A2K6BUY8   A0A2K6BUZ2   A0A1D5RH92   A0A2K6BV28   A0A2K6BUZ9   A0A2K6BV06   A0A2Y9THY0   J9JWR5   A0A2I3LRP3   A0A212F8F4   A0A2K5NKU0   A0A2K5NKT0   A0A0A0MWA1   A0A2K5NKF4   J9KG92   A0A2A4K4S3   G3RMR5   A0A2P6KCU3   A0A2K6P4J1   A0A2K6N5E7   G3QTW4   A0A2P6KDB3   A0A0D9RGB2   A0A2K6P4I3   A0A2K5XIM1   A0A2K5XIM7   A0A2K6N5E5   V4CF43   A0A1S3PMQ0   A0A1S3QLL2   A0A3S2L825   A0A2P6K6Q8   A0A2K5HFH4   C3ZT30   C4A0V9   A0A1E1WCP9   A0A2K5HFE9   A0A2P6JVG6   J9JNC1   A0A2P6K6P9   W4X9H3   A0A2P6K0D1   A0A139WK46   F1MJ44   G7NLD6   A0A2K6LD93   A0A0L8FSW4   A0A2P6K7A6   A0A2P6K1M6   A0A3P8SWG4   G3SB27   G3QWE7   A0A2P6K7N8   A0A2Y9RY84   A0A2I3M0J2   G7PZG4   H2NY78   H2QFW5   W4YY05   A0A2J8LSD7  

EC Number

2.1.1.-

Pubmed

28756777    26354079    22118469    19121390    23622113    16136131    + More
15057824    11181995    17974005    15489334    17431167    22398555    25362486    23254933    18563158    18362917    19820115    19393038    22002653   

EMBL

KZ149995    PZC75449.1    RSAL01000142    RVE46032.1    KQ461198    KPJ06061.1    + More
AGBW02009535    OWR50564.1    KQ458725    KPJ05352.1    KQ459983    KPJ19122.1    KQ460400    KPJ14980.1    NWSH01000953    PCG73395.1    RVE46029.1    BABH01021154    NWSH01001510    PCG71021.1    KQ460969    KPJ10206.1    AGBW02009801    OWR49895.1    RSAL01000063    RVE49477.1    ODYU01006917    SOQ49191.1    RVE49479.1    ODYU01010720    SOQ56004.1    ABLF02038592    KPJ05382.1    GAIX01004880    JAA87680.1    NWSH01000010    PCG80927.1    ADFV01098915    ADFV01098916    ADFV01098917    ADFV01098918    ADFV01098919    NBAG03000531    PNI17105.1    AACZ04058062    PNI17104.1    AC119403    PNI17106.1    AQIA01033538    AQIA01033539    AQIA01033540    AQIA01033541    AK302165    BAG63532.1    EF534355    AK314848    CH471139    ABQ10558.1    BAG37365.1    EAW69355.1    BX537601    BC028974    EAW69356.1    JSUE03020218    JSUE03020219    JSUE03020220    JSUE03020221    ABLF02038588    ABLF02038606    ABLF02038607    AHZZ02013168    AHZZ02013169    AHZZ02013170    AHZZ02013171    AGBW02009729    OWR50026.1    ABLF02037187    NWSH01000147    PCG79069.1    CABD030110760    MWRG01015819    PRD24148.1    MWRG01015375    PRD24313.1    AQIB01150271    KB200701    ESP00620.1    RSAL01000885    RVE41075.1    MWRG01023322    PRD22014.1    GG666676    EEN44236.1    GG666831    EEN41572.1    GDQN01006290    GDQN01003686    JAT84764.1    JAT87368.1    MWRG01130324    PRD18060.1    ABLF02025528    MWRG01023406    PRD21999.1    AAGJ04106031    AAGJ04106032    AAGJ04106033    MWRG01051860    PRD19789.1    KQ971332    KYB28274.1    CM001271    EHH29861.1    KQ426791    KOF67769.1    MWRG01022237    PRD22226.1    MWRG01042629    PRD20213.1    CABD030111734    CABD030112448    CABD030112449    CABD030112450    CABD030112451    CABD030112452    CABD030112453    CABD030112454    MWRG01021789    PRD22340.1    AHZZ02013870    AHZZ02013871    AHZZ02013872    AHZZ02013873    AHZZ02013874    AHZZ02013875    AHZZ02013876    AHZZ02013877    AHZZ02013878    CM001294    EHH59234.1    ABGA01347901    ABGA01347902    AACZ04030926    AAGJ04134332    AAGJ04134333    AAGJ04134334    AAGJ04134335    NBAG03000278    PNI50190.1   

Proteomes

UP000283053    UP000053240    UP000007151    UP000053268    UP000218220    UP000005204    + More
UP000007819    UP000001073    UP000002277    UP000005640    UP000233100    UP000233120    UP000006718    UP000028761    UP000233060    UP000001519    UP000233200    UP000233180    UP000029965    UP000233140    UP000030746    UP000087266    UP000233080    UP000001554    UP000007110    UP000007266    UP000009136    UP000053454    UP000265080    UP000248480    UP000009130    UP000001595   

PRIDE

H9IWZ4    B4DXX0    Q68EA5   

Pfam

PF00096   zf-C2H2        + More
PF12171   zf-C2H2_jaz
PF07776   zf-AD
PF01352   KRAB
PF05605   zf-Di19
PF12756   zf-C2H2_2
PF14291   DUF4371

Interpro

IPR012934   Znf_AD        + More
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR022755   Znf_C2H2_jaz       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR017114   YY-1-like       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR008598   Di19_Zn_binding_dom       
IPR003656   Znf_BED       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR001965   Znf_PHD       
IPR025398   DUF4371       
IPR017125   Znf_PRDM5-like       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

A0A2W1BK83   A0A3S2L580   A0A194QRA1   A0A212FA07   A0A0N1IE69   A0A0N0PE54   + More
A0A0N1IGS5   A0A2A4JMU5   A0A3S2NQN3   H9IWZ4   A0A2A4JGB7   A0A0N0PBL1   A0A212F827   A0A3S2NF42   A0A2H1W7Z1   A0A3S2NV19   A0A2H1WUB2   X1WX70   A0A0N1ICJ9   S4PJM9   A0A2A4K9P1   A0A2I3GCI3   A0A2J8J2W2   A0A2I3HD63   H2REK2   H2QEX6   A0A087WUM7   A0A2J8J2W0   A0A2K5VLF6   B4DXX0   A5HJR3   Q68EA5   A0A2K5VLD9   G3V131   A0A2K5VL69   A0A2K6BUY8   A0A2K6BUZ2   A0A1D5RH92   A0A2K6BV28   A0A2K6BUZ9   A0A2K6BV06   A0A2Y9THY0   J9JWR5   A0A2I3LRP3   A0A212F8F4   A0A2K5NKU0   A0A2K5NKT0   A0A0A0MWA1   A0A2K5NKF4   J9KG92   A0A2A4K4S3   G3RMR5   A0A2P6KCU3   A0A2K6P4J1   A0A2K6N5E7   G3QTW4   A0A2P6KDB3   A0A0D9RGB2   A0A2K6P4I3   A0A2K5XIM1   A0A2K5XIM7   A0A2K6N5E5   V4CF43   A0A1S3PMQ0   A0A1S3QLL2   A0A3S2L825   A0A2P6K6Q8   A0A2K5HFH4   C3ZT30   C4A0V9   A0A1E1WCP9   A0A2K5HFE9   A0A2P6JVG6   J9JNC1   A0A2P6K6P9   W4X9H3   A0A2P6K0D1   A0A139WK46   F1MJ44   G7NLD6   A0A2K6LD93   A0A0L8FSW4   A0A2P6K7A6   A0A2P6K1M6   A0A3P8SWG4   G3SB27   G3QWE7   A0A2P6K7N8   A0A2Y9RY84   A0A2I3M0J2   G7PZG4   H2NY78   H2QFW5   W4YY05   A0A2J8LSD7  

PDB

5V3M     E-value=8.28128e-20,     Score=239

KEGG

101737424    no KO assigned | (RefSeq) zinc finger protein 436-like

GO

GO:0005634   GO:0003676   GO:0008270   GO:0008168   GO:0046872   GO:0006355   GO:0000981   GO:0003677   GO:0045944   GO:0003700   GO:0043565   GO:0045893   GO:0045892   GO:0000976   GO:0000790   GO:0031519   GO:0000978   GO:0000980   GO:0005667   GO:0070895   GO:0022857   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

Subcellular location

Nucleus  

Length:

383

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03973

Exp number, first 60 AAs:

0.03024

Total prob of N-in:

0.00814

outside

1  -  383

 

 

Pi

275.851547

Theta

169.389773

Tajima's D

1.809195

CLR

0.012638

CSRT

0.846257687115644

Interpretation

Uncertain