Gene

KWMTBOMO06189

Pre Gene Modal

BGIBMGA001777

Annotation

PREDICTED:_zinc_finger_protein_708-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(+):2060941-2069612      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.236

CDS

ATGAAGACAGTTAAATTAGAAATTTCAGTTGACACAGTGTGCCATGGGTGTTTAAGTACCGATAGGCAAACAAGCACTTCGAGAGATACATCTGAATTATATTTACGTTTATTAGAAGACGGTTTATCCTCTGAAAATAAGGATGTGGCTCTCTGTTGGGAATGTACAGCAATCTTCAGGAAGATCCAGAGGTTTCAGAAGCAAATTAAAAACGCTCAAATCTCTCTTCTCTTATACCAATTGAATACAAGGACACCGTTATCAAAATTAGATACCGTAATCAAAAGTGTATACGATCTGGAGTGTGTACACGAAGAGAAAGCGGCACAAATAACCGAAGAAGGTAACTCGATAAAAATAGAAGCGGAAACGGAAGTCGCACTGCCCGCAAAAGAAGAATTAGACGAATATGACACTATAACGTACGAGGAGGACTACGCTGATGATGCGTGTATGAAAAGCATAATTGAAAACGAACAGAGAGCCAGCAAAATGCCAAGTAAGAGCGATATCAAACCCATGTCCATAAAGCAATACGAGAAATATGCAGTTTTCTCGAAGCAGAACGAGAAAGTTAATTCTGGTGACCTGAAAAAATACTATAAGAACGTTTTCTTGAGTGACGGTGAGATAGAGGAATATTTGAACACTAGATTAAGGAGGGATAAGAGCTTCCATCGTTTGAATTACAAGTGCGAGGATTGTGTACTCGGATACAAGGATAAGAGGGACTGGAATCGGCATAATGCTCTTCATCATAACACTTCGACCGGCCCCTACAAGTGCAGCGAGTGCAAAACGAAATGCCAAACCATCGATGTACTCGCCCAGCATTGGATAACTCACACGAAGGCGCTGCAGTGCGTCATCTGCGGCGACCTGCACAGGTCCCTGGGTGAGATAAGGAAGCACGTGAACAGGGCGCACACGGGCGTGTTCACGTGCAAGGAGTGCGGGGACCACAGCAGAACACTAAGGGAGTTCAGTCAGCATTACAAAAGCAAACACGAGAAGCTGGTATGTGATCATTGCGGCAAAGGTTTTTACAAGAAGCGCGTCCTAGAAAGTCATATGAGGAGGAACCATTTACCAGCCAAATGCGAGGTCTGCGGCCGTCAGTACTCTCTGTACCACACCCTGGAGGTTCACCTGCGGACTGTCCATCCTCACCTCATGAACGGGGCCTACAATAGGGACGCCTCGTACTGCGTCGAGTGCGATAGACAGTACCCAAGCGTCTACAAATACAGGAAGCATTTGAAACAGTCGGTCAGGCATACCCCGAAAAAGAAAGTAAGGATACCGTGCCCCGAATGCGGAAAAGTCTTCACGCGTACGAACTACATGAACAATCACTACAGGCTGTTCCATTCCAAGGACACGAAGCACTATTGTCAGCTTTGTAACAAGCTCTTCGTCACCGGCTACGCGGCCAGGAAACACAAAGAGTTCGTTCACGACAAACAAACTTTGCCCAAAAACAAGATCTGCGATATATGCGGCCGCGGCTTTAGCACGAACAGAATTCTAACCAATCACAGGAGGACACACACCGGAGAGAGACCGTACAAATGCCCGCACTGTACCGCCGCGTTCGCCCAAAGCACCGCCATGCACACGCACATGAAATCGCAACACAAACACGTAATGCCTCTACAGATCCCCGTCCACCAGATGGCGTGA

Protein

MKTVKLEISVDTVCHGCLSTDRQTSTSRDTSELYLRLLEDGLSSENKDVALCWECTAIFRKIQRFQKQIKNAQISLLLYQLNTRTPLSKLDTVIKSVYDLECVHEEKAAQITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYADDACMKSIIENEQRASKMPSKSDIKPMSIKQYEKYAVFSKQNEKVNSGDLKKYYKNVFLSDGEIEEYLNTRLRRDKSFHRLNYKCEDCVLGYKDKRDWNRHNALHHNTSTGPYKCSECKTKCQTIDVLAQHWITHTKALQCVICGDLHRSLGEIRKHVNRAHTGVFTCKECGDHSRTLREFSQHYKSKHEKLVCDHCGKGFYKKRVLESHMRRNHLPAKCEVCGRQYSLYHTLEVHLRTVHPHLMNGAYNRDASYCVECDRQYPSVYKYRKHLKQSVRHTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHSKDTKHYCQLCNKLFVTGYAARKHKEFVHDKQTLPKNKICDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKSQHKHVMPLQIPVHQMA

Uniprot

H9IWZ4   A0A2A4K9P1   A0A3S2NW05   A0A2A4KAB9   A0A2A4JMU5   A0A3S2THA9   + More
A0A3S2NF42   A0A2W1BK83   A0A0N0PBL1   A0A3S2NV19   A0A2H1WUB2   A0A0N1ICJ9   A0A212FHB4   A0A2A4JGB7   A0A1E1WCP9   A0A212F827   A0A2H1W7Z1   A0A087YR65   A0A3B3UVZ4   A0A3B3YZ32   A0A0N1IEI9   A0A0N0PE54   A0A0N1IFW2   C3ZPQ0   A0A3B3UVG3   A0A212F479   A0A3Q3IRR6   L7MZU6   W5P8U9  

Pubmed

19121390    28756777    26354079    22118469    18563158    21881562    + More
20809919   

EMBL

BABH01021154    NWSH01000010    PCG80927.1    RSAL01000142    RVE46036.1    PCG80926.1    + More
NWSH01000953    PCG73395.1    RVE46037.1    RSAL01000063    RVE49477.1    KZ149995    PZC75449.1    KQ460969    KPJ10206.1    RVE49479.1    ODYU01010720    SOQ56004.1    KQ458725    KPJ05382.1    AGBW02008515    OWR53125.1    NWSH01001510    PCG71021.1    GDQN01006290    GDQN01003686    JAT84764.1    JAT87368.1    AGBW02009801    OWR49895.1    ODYU01006917    SOQ49191.1    AYCK01013004    KQ458486    KPJ05869.1    KQ459983    KPJ19122.1    KQ460140    KPJ17511.1    GG666659    EEN45471.1    AGBW02010415    OWR48546.1    AAWZ02035144    AAWZ02035145    AMGL01047138   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000028760    UP000261500    UP000261480    UP000001554    UP000261600    UP000001646    UP000002356   

PRIDE

H9IWZ4   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF12171   zf-C2H2_jaz
PF12756   zf-C2H2_2
PF01352   KRAB

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR022755   Znf_C2H2_jaz       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9IWZ4   A0A2A4K9P1   A0A3S2NW05   A0A2A4KAB9   A0A2A4JMU5   A0A3S2THA9   + More
A0A3S2NF42   A0A2W1BK83   A0A0N0PBL1   A0A3S2NV19   A0A2H1WUB2   A0A0N1ICJ9   A0A212FHB4   A0A2A4JGB7   A0A1E1WCP9   A0A212F827   A0A2H1W7Z1   A0A087YR65   A0A3B3UVZ4   A0A3B3YZ32   A0A0N1IEI9   A0A0N0PE54   A0A0N1IFW2   C3ZPQ0   A0A3B3UVG3   A0A212F479   A0A3Q3IRR6   L7MZU6   W5P8U9  

PDB

5V3M     E-value=4.16372e-18,     Score=226

KEGG

101741474    no KO assigned | (RefSeq) zinc finger protein 665-like

GO

GO:0003676   GO:0005634   GO:0008270   GO:0046872   GO:0010468   GO:0000979   GO:0003677   GO:0006355   GO:0022857   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

Length:

560

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00034

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00161

outside

1  -  560

 

 

Pi

247.192644

Theta

167.326017

Tajima's D

2.225912

CLR

0.258118

CSRT

0.913054347282636

Interpretation

Uncertain