Gene

KWMTBOMO06169  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001670

Annotation

PREDICTED:_zinc_finger_protein_624-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr11(-):1863108-1866510      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.67

CDS

ATGAAAGTTTCGCTCCGAGAGGATTTTCTGTTATTTAGGAACGCGACACGAGAAAATACGAAACAGGTCGACGACACGTCCAGCTCCGACACGGAAAACGAAATGGTTGATCCGAAAATGGCGGTAAAATGCAACATTTGCGAAAAATCATATCCAACCGAGAAGAAATTGCTGAAACATCAAGACAAAAAGCACATGATCGTATACGAGAGGCCAAAGAAACGCGTCTCGTTCTCCGACCACGTTATAGTTCACGAAGTGAAAGAATATCATAAATGCAGAAAATGCCCTAAAATATTCAAAGAGTACAAATCGTTGAAGGCCCACTCTAAATTACACCACAAAAAGCGTAAATGCTATATATGTAATTACTGTAACAAGAAATTTGTAGATCGGGTGTTTTTTAAAGTTCACATCAAACTGCACTGTGATGTTTGTGGACTTCTCTTTTCAAGTAAACTGAAATATCTTCAGCACAGACATAAAGCTTGTCGCATACAAAAGAAACACCAATGCAGAATATGCAACGAATCATATTTCCGGTACATGGACCTCAAAGATCACAGTCTCGAACACCTAAGGCTGTGTTATGTTTGCGATGTGTGTAAAGAACAGTTTGATACGAAATGTGCAATTGCCCACCATTTAAAATTCTTGCATTCCGGTAGACGCCCCCGGACATTATACAAAATACTCAATATAGGCACCGAAAGACTGTACTTGTGTAGGTTCTGCGACGAAAGCTCTGTAGATAAAAGGTTAATAGAGAAACATACACAGCTGTTACCGGATTTGAGTAATCGAGCTATGACGGGCTACCGAGACTTCTACTTTTGCGATCAATGCATGAGGAAGTTCAGCACAGAGACCGATATGCTACAGCACAAATGGACTCATTTCCTGAAGACTTCTGACAACACGCAGGTGCAACTTCAGAGTGTGCTAGTGAATAAGAAGCCAAAGTTGAAAACGACTTACAAAGTCAATGACGTAATACCGGAACGCTTTAATCCTAAAGTGGTTTTAGAGAAATTAGCAATAGACCCATTTCCAAACTACATGAGCTTTAATTGTAAAAAGTTTGATATTGTTACCGGTGAAATTAAGAAAGCTATAGTAGATCCGAAAAGTAAAAAAACGATAGTATCAAAACATCAATGTCCTATATGCGGTAAGTATTACTCAACAAACTACTGCTTGAATCGCCATATTGAATCACAGCACAAAAATTCCGAGAATCTTCACTGCCATGTCTGCGAGGAGACCTTTGTTTGGCCTTCACTCTTGAGGTCGCACAAGTGCCTCCGCCTCAACCACTCCGAACACCCATTCCAGAACTCGAACCCGGAGGCCCCCTTCCATAACTACAGTGAACAAAATGCGTTTGATGATTTTAATATATCATACGATGATGATTATTTGAATAACATTGATTTCGAGATACCTGCTCCGATAGTGGAGCTGACGGAAAGTGAAAATGTGTTTATTCCTAATAACTTGATAGATCAAGACGGGGGTAAAGTGTGCATTTCCCAGAATGGATATAAAGTGGTGGTCCAAGAAGTACCTGTCGAATTTTAG

Protein

MKVSLREDFLLFRNATRENTKQVDDTSSSDTENEMVDPKMAVKCNICEKSYPTEKKLLKHQDKKHMIVYERPKKRVSFSDHVIVHEVKEYHKCRKCPKIFKEYKSLKAHSKLHHKKRKCYICNYCNKKFVDRVFFKVHIKLHCDVCGLLFSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDHSLEHLRLCYVCDVCKEQFDTKCAIAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKHTQLLPDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQHKWTHFLKTSDNTQVQLQSVLVNKKPKLKTTYKVNDVIPERFNPKVVLEKLAIDPFPNYMSFNCKKFDIVTGEIKKAIVDPKSKKTIVSKHQCPICGKYYSTNYCLNRHIESQHKNSENLHCHVCEETFVWPSLLRSHKCLRLNHSEHPFQNSNPEAPFHNYSEQNAFDDFNISYDDDYLNNIDFEIPAPIVELTESENVFIPNNLIDQDGGKVCISQNGYKVVVQEVPVEF

Uniprot

H9IWN8   A0A3S2L7L9   A0A2H1WBF6   A0A2A4JBB7   A0A0L7L7H8   A0A212FE85   + More
A0A1E1WUJ8   A0A0L8HBC6   A0A0L8HB16   A0A0L8GEL1   A0A0L8H2K6   A0A0L8GZG2   A0A0L8FUW2   A0A0L8G2K1   A0A0L8FHM2   A0A0L8FYR2   A0A0L8I9A7   A0A0L8GA72   A0A0L8FJQ5   A0A0L8H2L7   A0A0L8H196   A0A0L8HVV4   A0A067R2B5   A0A0L8GHN5   A0A0L8GZ39   A0A0L8HUE1   A0A0T6BBV3   A0A0L8GTH5   A0A0L8FV18   A0A0L8FZ00   A0A0L8G1L8   H2Y5B4   A0A0L8HSF2   A0A0L8HYX0   A0A0L8G7I1   A0A0L8GBN4   A0A0L8H130   A0A0L8G5M6   A0A0L8GRW5   A0A0L8FZM5   B0WYS7   A0A0L8FGD9   A0A3Q4AR89   A0A0L8HGP4   G3P812   A0A0L8GHW7   H2Z5R5   F1LWS7   A0A0L8HFZ9   A0A0L8FZ26   A0A0L8FSY5   A0A0L8GUF4   A0A0L8HF38   A0A1U8CGA2   A0A0L8G6R6   A0A0L8H1E5   A0A0L8G356   B2RYA9   F7FQI2   A0A0L8GB31   A0A0L8FZN9   A0A0L8HSU1   F1LMA0   A0A0L8GTQ0   A0A0L8HUH0   A0A0G2K2I4   A0A087V0T5   H2Y7A4   A0A0L8GE98   A0A0L8HMZ0   A0A0L8GZ46   A0A3Q1B8N7   A0A0L8G9J9   A0A087TJ00   A0A0L8HX39   A0A0L8G5H0   H2Y7A1   A0A087UPP2   R7V818   A0A0L8G9L9   A0A3S2L825   A0A0L8HGN9   A0A1S3GTL2   A0A0L8GFX9   A0A087YKY1   A0A087UQQ9   A0A087U2Y4   A0A0L8G312   A0A087T5Q8  

EC Number

2.1.1.-

Pubmed

19121390    26227816    22118469    24845553    15057822    15489334    + More
15632090    17495919    23254933   

EMBL

BABH01021128    BABH01021129    BABH01021130    BABH01021131    BABH01021132    BABH01021133    + More
RSAL01000101    RVE47524.1    ODYU01007549    SOQ50411.1    NWSH01002066    PCG69261.1    JTDY01002484    KOB71325.1    AGBW02008966    OWR52052.1    GDQN01000335    JAT90719.1    KQ418671    KOF86359.1    KQ418762    KOF85980.1    KQ422234    KOF75284.1    KQ419593    KOF83000.1    KQ419844    KOF82204.1    KQ426253    KOF68492.1    KQ424264    KOF71252.1    KQ431554    KOF63122.1    KQ425190    KOF69818.1    KQ416225    KOF98037.1    KQ423013    KOF73744.1    KQ430613    KOF63895.1    KOF83010.1    KOF83003.1    KQ417191    KOF93363.1    KK852805    KDR16118.1    KQ421769    KOF76468.1    KQ419832    KOF82223.1    KQ417280    KOF92814.1    LJIG01002157    KRT84783.1    KQ420442    KOF80268.1    KOF68488.1    KOF69809.1    KQ424777    KOF70490.1    KQ417381    KOF92136.1    KQ416962    KOF94407.1    KQ423406    KOF72977.1    KQ422783    KOF74249.1    KOF82991.1    KQ423819    KOF72124.1    KQ420780    KOF79355.1    KOF69815.1    DS232197    EDS37187.1    KQ432511    KOF62740.1    KQ418295    KOF87945.1    KOF76459.1    AABR07055889    KQ418338    KOF87705.1    KOF69834.1    KQ426791    KOF67758.1    KQ420308    KOF80671.1    KOF87704.1    KQ423737    KOF72270.1    KOF83012.1    KQ424245    KOF71274.1    BC166711    CH473993    AAI66711.1    EDL78382.1    KOF73745.1    KOF69830.1    KQ417370    KOF92274.1    AABR07069430    KOF80267.1    KOF92868.1    KL815010    KFM83224.1    KQ422263    KOF75253.1    KQ417725    KOF90596.1    KOF82228.1    KQ423235    KOF73225.1    KK115419    KFM65089.1    KOF93365.1    KOF72276.1    KK120905    KFM79331.1    AMQN01038589    KB294404    ELU14642.1    KQ423101    KOF73569.1    RSAL01000885    RVE41075.1    KOF87940.1    KQ422141    KOF75450.1    AYCK01001268    KK121079    KFM79698.1    KK117904    KFM71723.1    KOF71273.1    KK113548    KFM60447.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000037510    UP000007151    UP000053454    + More
UP000027135    UP000007875    UP000002320    UP000261620    UP000007635    UP000002494    UP000189706    UP000002280    UP000054359    UP000257160    UP000014760    UP000081671    UP000028760   

PRIDE

H9IWN8    F1LWS7    F1LMA0   

Pfam

PF05994   FragX_IP        + More
PF00096   zf-C2H2
PF07159   DUF1394
PF07776   zf-AD
PF01352   KRAB
PF12171   zf-C2H2_jaz

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR008081   Cytoplasmic_FMR1-int       
IPR009828   DUF1394       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003656   Znf_BED       
IPR017921   Znf_CTCHY       
IPR001965   Znf_PHD       
IPR017455   Znf_FYVE-rel       
IPR017125   Znf_PRDM5-like       
IPR017114   YY-1-like       
IPR012934   Znf_AD       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR022755   Znf_C2H2_jaz       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9IWN8   A0A3S2L7L9   A0A2H1WBF6   A0A2A4JBB7   A0A0L7L7H8   A0A212FE85   + More
A0A1E1WUJ8   A0A0L8HBC6   A0A0L8HB16   A0A0L8GEL1   A0A0L8H2K6   A0A0L8GZG2   A0A0L8FUW2   A0A0L8G2K1   A0A0L8FHM2   A0A0L8FYR2   A0A0L8I9A7   A0A0L8GA72   A0A0L8FJQ5   A0A0L8H2L7   A0A0L8H196   A0A0L8HVV4   A0A067R2B5   A0A0L8GHN5   A0A0L8GZ39   A0A0L8HUE1   A0A0T6BBV3   A0A0L8GTH5   A0A0L8FV18   A0A0L8FZ00   A0A0L8G1L8   H2Y5B4   A0A0L8HSF2   A0A0L8HYX0   A0A0L8G7I1   A0A0L8GBN4   A0A0L8H130   A0A0L8G5M6   A0A0L8GRW5   A0A0L8FZM5   B0WYS7   A0A0L8FGD9   A0A3Q4AR89   A0A0L8HGP4   G3P812   A0A0L8GHW7   H2Z5R5   F1LWS7   A0A0L8HFZ9   A0A0L8FZ26   A0A0L8FSY5   A0A0L8GUF4   A0A0L8HF38   A0A1U8CGA2   A0A0L8G6R6   A0A0L8H1E5   A0A0L8G356   B2RYA9   F7FQI2   A0A0L8GB31   A0A0L8FZN9   A0A0L8HSU1   F1LMA0   A0A0L8GTQ0   A0A0L8HUH0   A0A0G2K2I4   A0A087V0T5   H2Y7A4   A0A0L8GE98   A0A0L8HMZ0   A0A0L8GZ46   A0A3Q1B8N7   A0A0L8G9J9   A0A087TJ00   A0A0L8HX39   A0A0L8G5H0   H2Y7A1   A0A087UPP2   R7V818   A0A0L8G9L9   A0A3S2L825   A0A0L8HGN9   A0A1S3GTL2   A0A0L8GFX9   A0A087YKY1   A0A087UQQ9   A0A087U2Y4   A0A0L8G312   A0A087T5Q8  

PDB

2DLQ     E-value=3.32015e-08,     Score=140

KEGG

101735986    no KO assigned | (RefSeq) zinc finger protein 836-like

GO

GO:0003676   GO:0003677   GO:0046872   GO:0000976   GO:0005634   GO:0008270   GO:0006355   GO:0003700   GO:0043565   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

PANTHER

PTHR12195  

Length:

526

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00098

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00076

outside

1  -  526

 

 

Pi

162.24448

Theta

163.507276

Tajima's D

-0.308541

CLR

13.221033

CSRT

0.292085395730213

Interpretation

Uncertain