Gene

KWMTBOMO06128

Pre Gene Modal

BGIBMGA001741

Annotation

PREDICTED:_zinc_finger_protein_568-like_[Bombyx_mori]

Location

Bomo_Chr11(+):807535-835928      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.898

CDS

ATGAATGAGAAAACTGATTTGAATGCTGCCAAAAACAATGAGGATTATAGAAGATTATCAGCTTGCCGGATATGTTTGGCGCTGGGCGTCAAATTGTATAATATGAAGAAATACAAACTATCAATGCTCTATGAAGAATTAACTGATTTAATCCATAGTGAACTGGACAAGCTGCCCCAGGATCTATGCTGGGAATGCACCCACAGGCTACTGAACTACGAGAAATTCAAGGCTAAAGCCACGAGGACCCAAGATATTCTACTCAATCTCCTGGACATACATAATGAGCTGACAGACAGATTGGTATCAACGATCGACAGAGAATCCAGAAATCTAAACTCCAATCTGTGCACAAAGCTGTATAAAGCAAACCACTCTGATGTGTGCATACAATGCGATGAGAATGATAAAAACGAAATTCAAGAAATCATACTAGAAGAGGCAATCAATATCAAAGCGAATGATTCAGATGTCGATGATATTAAGTATGATAATAATATGAAAACGAATGACAGTGAAGATGATGATTTTAATGAAACGAACACTGATGTGATGATGATGGAAGATACAGCATGCGATAATCAAGTCGAAATACTAGAGTTAAATGTGAAAAGTGCTAAAAGAAAACTCTTAAGACGTGATATTAAAACTAAGGAAGCAGTGAATCTTAAATCTAGTAATGACAACGGTAAAATAGCTAATGAAGATTATATAGATCTATCATTGTTCGACATCAAATATCTAAGTCAGGAGGAGCAGCTGGACGAGATCGCGAAACGCAAACAGGGTTCAAACTACAAGAACTCCCCGTACAAATGCGAGGACTGCTACAAGGGCTTCCTGCACAAGGAAGTGTACGAGCGTCATGCCGTCCACCACACTGAGTTGTACGGCTCCTATCAGTGCAAGATCTGTAAGATTCGCACGAAGAAAAGATACGAATTGAAACATCACTCGGCGAAGCACCAGCAGAAGTACATCTGCAGGGGATGTCCCTTCGTGACCGGTTCGCGCTCCGCAGCCCACATACACGGAAAATATCACAACGGCAAGAGGTATACGTGCGGACACTGCGGAGAGATATTCGAAGTGGTCCCCAGGAAAAACACTTCGTACATGAGTCACTTGCGGACGAAGCACCCCTCCGACATAGTGTGCGCCCTCTGCGGACACTCCTTCGTCAGCAAGAAGGGTCTGGTCTTGCACACGAACTTCAAACACAAATTCCACAGCAAAACGGTGCCAAAAGACGGACCGGCCTGTGAGGAGTGTAACATTGTATTCGTATCAGGGCACGCGCTAGACACTCACATGTCACTGTCAACTAAACACAATAAGTCCCTCGACACTTCCATAAGGCGGAGGGTGCACAAGAAAGCTTCGGACCACAAGAGGCCGGCGCATCACAAGCCCCCCGAGGGACCGATACCTTGTGAACAGTGCGACATGGAACTGCCCAACGCTCGACGCTACGATAGACACTTCAGAAAGCTGCACCCGGGCAAGAATAGAACGAAATTCTTCACCGAAGACAGCCAGTGCATGTGCGAAATATGCGGTCAGATGTTCAGGTGCATGTCGTTGCTGAAAGATCATTACGACGCTCACAACTCGAGCTCGTTTGAGTGCGGCGAGTGCGGCAAGCGCTTCCCGCGGCGCTCCCGGCTCGTCATACACGAGAGGGTGCACGCCACCAGGCCGCTGCACTCCTGCGCGATATGCGGCAGACGGTTCACCGTCTACGCGAACATGATCAGGCATCGGGATTCCGTGCATATGAATCTCAAGAAATTCGACTGTAATCTTTGCGGGAAAAAATTCAAGCAACTTTGCGGACTGAGGACGCACATCGACTGCTACCACCACAAGCAGCCCTGGCCGAAGAGGAACCGGAAGAAGGCGAGCAATAATCCAACTCCGGTGACGTCAGCGAGCATAGACAACGACACGTGGGAACCAAAAAAAGTGTCCCAAGAGAGATTTTAA

Protein

MNEKTDLNAAKNNEDYRRLSACRICLALGVKLYNMKKYKLSMLYEELTDLIHSELDKLPQDLCWECTHRLLNYEKFKAKATRTQDILLNLLDIHNELTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIANEDYIDLSLFDIKYLSQEEQLDEIAKRKQGSNYKNSPYKCEDCYKGFLHKEVYERHAVHHTELYGSYQCKICKIRTKKRYELKHHSAKHQQKYICRGCPFVTGSRSAAHIHGKYHNGKRYTCGHCGEIFEVVPRKNTSYMSHLRTKHPSDIVCALCGHSFVSKKGLVLHTNFKHKFHSKTVPKDGPACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPKRNRKKASNNPTPVTSASIDNDTWEPKKVSQERF

Uniprot

A0A2A4JSJ1   A0A194Q527   H9IWW1   A0A212F5H6   A0A212ET42   A0A1E1WHH4   + More
A0A3S2TJB5   A0A2H1W3X2   A0A194Q632   A0A194QAM2   A0A2A4JVY9   A0A2A4K8P9   A0A194QHT0   A0A2A4JTI5   A0A2A4JVX9   A0A0L7LGN8   A0A2A4JW96   A0A2A4K955   A0A2H1WS93   A0A2W1BE97   A0A194QRI4   A0A212F6M7   A0A2W1BCB5   A0A2W1BFA5   A0A2A4JMX7   A0A3S2P4F7   A0A2A4K5S6   A0A2H1V264   A0A1E1W1K0   H9IWV3   A0A2H1W417   A0A0N1PFS3   A0A2H1WDF0   A0A2A4K4E2   A0A2W1BQ38   A0A2W1BWP0   A0A3S2NNE3   A0A2W1B1S3   A0A0N1IHJ8   A0A2H1WD86   A0A2A4K524   A0A2W1BJE6   A0A0N1PHI2   A0A0N1ICJ9   A0A212F9K1   A0A1E1W0D1   A0A0N1IFW2   A0A3S2LQ94   A0A1S3GPW1   W5P5M5  

Pubmed

26354079    19121390    22118469    26227816    28756777    20809919    + More

EMBL

NWSH01000652    PCG75007.1    KQ459463    KPJ00464.1    BABH01021020    BABH01021021    + More
BABH01021022    BABH01021023    AGBW02010195    OWR48987.1    AGBW02012649    OWR44658.1    GDQN01004610    JAT86444.1    RSAL01000098    RVE47648.1    ODYU01006174    SOQ47799.1    KPJ00465.1    KPJ00466.1    NWSH01000508    PCG75979.1    NWSH01000027    PCG80587.1    KQ458981    KPJ04495.1    PCG75008.1    PCG75969.1    JTDY01001260    KOB74361.1    PCG75968.1    PCG80589.1    ODYU01010673    SOQ55945.1    KZ150164    PZC72671.1    KQ461181    KPJ07590.1    AGBW02009994    OWR49387.1    KZ150504    PZC70656.1    KZ150313    PZC71450.1    NWSH01000946    PCG73425.1    RSAL01000025    RVE52099.1    NWSH01000141    PCG79123.1    ODYU01000342    SOQ34930.1    GDQN01011639    GDQN01010917    GDQN01010719    GDQN01010467    GDQN01010242    GDQN01003347    JAT79415.1    JAT80137.1    JAT80335.1    JAT80587.1    JAT80812.1    JAT87707.1    BABH01020992    BABH01020993    ODYU01006169    SOQ47788.1    KQ460882    KPJ11499.1    ODYU01007811    SOQ50892.1    PCG79125.1    KZ149937    PZC77098.1    PZC77096.1    RVE52097.1    KZ150681    PZC70388.1    LADI01012895    KPJ20750.1    ODYU01007868    SOQ51021.1    PCG79126.1    KZ150257    PZC71783.1    KQ459838    KPJ19752.1    KQ458725    KPJ05382.1    AGBW02009568    OWR50408.1    GDQN01010670    JAT80384.1    KQ460140    KPJ17511.1    RSAL01000522    RVE41462.1    AMGL01028746   

Proteomes

UP000218220    UP000053268    UP000005204    UP000007151    UP000283053    UP000037510    + More
UP000053240    UP000081671    UP000002356   

PRIDE

H9IWW1    H9IWV3   

Pfam

PF00096   zf-C2H2        + More
PF05485   THAP
PF07776   zf-AD
PF04114   Gaa1
PF12171   zf-C2H2_jaz
PF01352   KRAB

Interpro

IPR012934   Znf_AD        + More
IPR038441   THAP_Znf_sf       
IPR036236   Znf_C2H2_sf       
IPR006612   THAP_Znf       
IPR013087   Znf_C2H2_type       
IPR007246   Gaa1       
IPR022755   Znf_C2H2_jaz       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

Gene 3D

3.30.40.180    

CDD

cd07765  KRAB_A-box

ProteinModelPortal

A0A2A4JSJ1   A0A194Q527   H9IWW1   A0A212F5H6   A0A212ET42   A0A1E1WHH4   + More
A0A3S2TJB5   A0A2H1W3X2   A0A194Q632   A0A194QAM2   A0A2A4JVY9   A0A2A4K8P9   A0A194QHT0   A0A2A4JTI5   A0A2A4JVX9   A0A0L7LGN8   A0A2A4JW96   A0A2A4K955   A0A2H1WS93   A0A2W1BE97   A0A194QRI4   A0A212F6M7   A0A2W1BCB5   A0A2W1BFA5   A0A2A4JMX7   A0A3S2P4F7   A0A2A4K5S6   A0A2H1V264   A0A1E1W1K0   H9IWV3   A0A2H1W417   A0A0N1PFS3   A0A2H1WDF0   A0A2A4K4E2   A0A2W1BQ38   A0A2W1BWP0   A0A3S2NNE3   A0A2W1B1S3   A0A0N1IHJ8   A0A2H1WD86   A0A2A4K524   A0A2W1BJE6   A0A0N1PHI2   A0A0N1ICJ9   A0A212F9K1   A0A1E1W0D1   A0A0N1IFW2   A0A3S2LQ94   A0A1S3GPW1   W5P5M5  

PDB

5V3M     E-value=2.42819e-14,     Score=194

KEGG

101743870    no KO assigned | (RefSeq) zinc finger protein 568-like

GO

GO:0008270   GO:0003677   GO:0005634   GO:0003676   GO:0042765   GO:0046872   GO:0006355   GO:0030246   GO:0004559   GO:0006013   GO:0015923   GO:0006260  

PANTHER

PTHR13304  

Length:

661

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15372

Exp number, first 60 AAs:

0.15322

Total prob of N-in:

0.01017

outside

1  -  661

 

 

Pi

175.078861

Theta

148.370642

Tajima's D

0.486526

CLR

0.480846

CSRT

0.51692415379231

Interpretation

Uncertain