Silkworm Genome Informatics Database

Gene

KWMTBOMO06085

Annotation

PREDICTED:_zinc_finger_protein_660-like_[Bombyx_mori]

Location

Bomo_Chr11(+):158965-165903 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.127

CDS

ATGGGCGTTAAAGGTAGTCCACGATCGTTTTCATTAATGTTGTTAGTCAACAAAGGCAGCAAAATATGCACAACCGAATCTTTGTTAAGCCGGGGATGCTTAGGGACGGGCAGGCTGTACAACATGCACCAGTACGGACTGGCGGAGCCTTATTCACTGCTCACCGGAATTGAGTTGACAGATCCAAATCGTCCGCAGCAACTCTGCAGTATGTGTAGAGCCCTACTTATCAAGTACTTGTCATTCAGAAGACGATGTCATGAAGCCGAGATGCTCCTACAGAGTTTGGCAGAAGTTAATCCGGTTCTAACAGTGGACAGCATATCGACCATAGACCGATTGACGCACCGTCTCAATCCATGCAACCAAACGTCTCCAACGAACGTTGCCTACCCGGAAATCGAGGAGGAACCACCGATAGAAGCACCACAAGAAGACATGATCTACGAAGAGCCCCCTCCCAGTCCGGAACGAAAGAAGAAGCTTAAAAAGTCCAAGCGAAAGTTCTCGTTTGACGTCGAAGACTTGCAGCCTCTGAGCACGATCAAAACGGAGAAATTGAAACCGAAGAAGAGCAGGGTCAACAATCTGTATACGGACCCCGCGGACAGGGCCAAGTTCTCGGAGCGGTACGACGTGGACATCGTCGTTATGAGGAAGGAAGACGAATACCAGGAGATGACGGACAGGAGGAACAGCGAGAAGTACTTGAGGGCCCATAACAAATGCGAGCAGTGCTACAAGGGGTTCATACACGAGGATACGCTGAAGAGGCACGTCAAAGATAAACATGATGTTAATCTGGAGCACGTCTGCGAATACTGCAAGTTCAGGTTCAAAGAAAGGTCGAACTTGTCGGGGCATTACCGGAGGCACCACAAGTACAAGTACATATGCCGGGCCTGCGGGATCACCACGAGGATGCGCGAGCACGCGGTGCAGCACTCCAAGATGCACACGCAGAAGTTCGAGTGCAAGTACTGCGGGAAGGTCTTCAACAAGCACGGCTCCGAGCTGCCCTGGTGCAGGATATGCGGGGACGCCTTCATCAGCACCAAGACTCACATGGAGAGACTCCACAAAGAGGTGCTGAACCTGCCCGCGGCGCTGCGCTGCGCCGAGTGCGGCACGCAGTTCCTGAGCGAGCGCGCGGCGCGGGGGCACGCGGCGGGGGGTGCAGGGGGGCCGGCGGGGGGCGCGGGGGCGGCGCGGTGCGCGGGGGGCGCGTGCTGCGTGCACTGCGCCCAGCGGTTTGACGGGGAGCGCGCGCTGCGGGACCACGTGCTCGCCGTGCACAAGGTGCAGTACTCCTGCGCGCAGTGCAACAAGACGTTCAGCCATGAGAGCAAGCTGAACAACCACCTGCTGGAGAAGCACAGCGAGGGCGAGGCCGACGCGCCGCCCGGCAGGAAGCGGTACATGAAGGTAGCGCCCGCGATGTGCCACATCTGCGGGAAGATAATAGCGGACCAGTACCACATGGTGTACCACCAGCGGATCCACACCGGGGAGAAGCCGTACGCGTGCTCCGAGTGCCCCAAGCGGTTCCGCATGCCGGAGCAGCTCCAGAACCACGTGCGCATCCACACCGGCGAGCGGCCCTTCAAGTGCAAGTACTGTCCCAACACGTTCAAGACGTACCCGGCGATGAGCAGACACCACCTCGTGCACACGGGGGTCCGGCGCCACGCCTGCTCCGTGTGCGACAAGGGCTTCGCCACCAGCGCCGAGATGAAGGCGCACGTGCGGACCGTGCACATGAAGATCCCGGCGCGACCCCGCCCCCGCAGAGCGGAGCGGGACTAG

Protein

MGVKGSPRSFSLMLLVNKGSKICTTESLLSRGCLGTGRLYNMHQYGLAEPYSLLTGIELTDPNRPQQLCSMCRALLIKYLSFRRRCHEAEMLLQSLAEVNPVLTVDSISTIDRLTHRLNPCNQTSPTNVAYPEIEEEPPIEAPQEDMIYEEPPPSPERKKKLKKSKRKFSFDVEDLQPLSTIKTEKLKPKKSRVNNLYTDPADRAKFSERYDVDIVVMRKEDEYQEMTDRRNSEKYLRAHNKCEQCYKGFIHEDTLKRHVKDKHDVNLEHVCEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMREHAVQHSKMHTQKFECKYCGKVFNKHGSELPWCRICGDAFISTKTHMERLHKEVLNLPAALRCAECGTQFLSERAARGHAAGGAGGPAGGAGAARCAGGACCVHCAQRFDGERALRDHVLAVHKVQYSCAQCNKTFSHESKLNNHLLEKHSEGEADAPPGRKRYMKVAPAMCHICGKIIADQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVHTGVRRHACSVCDKGFATSAEMKAHVRTVHMKIPARPRPRRAERD

Uniprot

A0A0N1IE84 H9IWS1 A0A2W1BE97

Pubmed

26354079 19121390 28756777

EMBL

KQ458725 KPJ05381.1 BABH01020960 KZ150164 PZC72671.1

Proteomes

UP000053268 UP000005204

PRIDE

H9IWS1

Pfam

PF00096 zf-C2H2 + More
PF07776 zf-AD

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A0N1IE84 H9IWS1 A0A2W1BE97

PDB

5V3M E-value=1.31938e-22, Score=265

KEGG

101736120 no KO assigned | (RefSeq) zinc finger protein 660-like

GO

GO:0003676 GO:0008270 GO:0005634 GO:0046872 GO:0007166 GO:0016020 GO:0003677 GO:0000723 GO:0006260

Length:

601

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00297

Exp number, first 60 AAs:

0.000670000000000001

Total prob of N-in:

0.00043

outside

1 - 601

Pi

342.52563

Theta

224.254101

Tajima's D

1.698944

CLR

0.279361

CSRT

0.823658817059147

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics