SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04995
Pre Gene Modal
BGIBMGA008094
Annotation
forkhead_box_sub-group_O_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.083
 

Sequence

CDS
ATGTCAATTCAGGGAGGCGGCGGTTACCAGAGCCCTTGGTCATCTCAGACGGGGCTGTCAGAACTAGAGGGAACAATGGCAGAGTTGGAACCATTAGGTGAACTGGCTGAGGTTGGCTTCGAGCCACAGACGCGCGCGCGATCCAACACGTGGCCGCTTCCAAGGCCAGACAACTACGTCGAGCAGGTAGACGAAGCCGGCTCTAAGAAGAATTCCAACCAGAATCTATCTGGAGCCCCACCAATACCAGCGAAGAAAAATTCATCGCGTCGCAACGCCTGGGGCAATCTTTCGTACGCAGATCTCATAACGCAAGCCATCACCTCGGCACAGGACAACAGGCTCACACTGTCGCAGATATACGAGTGGATGGTCCAGAATGTGCCATATTTCAAAGACAAAGGGGATAACAATTCATCCGCAGGATGGAAGAATTCGATAAGACACAACCTGTCTCTTCACAACCGCTTCATGAGAGTTCAGAATGAGGGTACTGGCAAGTCATCATGGTGGATGATCAATCCCGACGCCAAGCCCGGAAAATCCGTCAGGAGGCGAGCCGCTTCGATGGAAACCTCGAAATTCGAGAAACGAAGAGGAAGGGTAAAGAAAAAGACCGAAGCTTTAAGAAATGGAGCCACAGCTGATGCAACACCTAGCCCAAGTAGCTCAGTATCGGAGAGCATCGACATATTCACAGACTCACCAATGCACAGCAGTTTCCAGTTGTCGCCCGACTTCCGCCAGCGTGCTCCATCAAACGCTTCATCTTGCGGACGTCTATCTCCAATTCCTTCAATGATCCCTTCAGAGCCAGATTGGAAGCAAGAATACGCGAATGACTACGCCACCAATACAGACTTCTCACAAGCGGACTACACGCAAGAGGAACAGTTGGCAGGTTCGCTGGCCGATTCCATGAAGCTGCAGGGAGCCGACCCATTCCTGAACCCGTACGTACCAACGACCTCGTCATCTACTTCAGGCGGTAGTTTTCGGTATGGATCCTACGGAACCTGCCCAAGACACCCTCACGGAGGCTGCACGTGTGCCTCTATGTACTCGCATCCTGCCCATCCTGCCCACCCCACACACCCACATCAGCATGCCTTGGATCATTTCGTCAGGCCACCGCCGTCTGCTGATCAAGCCGATATCATGCAAACGGGTAATAGGCAAACTCAAATGGTGACGACGTCGGATCCCGCTTTGATGAATGGTGGAATGATGGTGCAGGCTGGTGGAATGGGTCCAACGACTGTCATGGGACAGATAATGGGCGCCTTGAACTCTGGTTTGGTAGAGGACTTAAATTTCGAAGCATTGGAACATGGCTTCGACTGCAATGTAGATGAGGTCATAAAACACGAACTCAGCATGGACGGGTCCTTAGACTTCAATTTCCCTCAGCAGCAGACCGCAATGGCTGCCGAAGCAGAGAGCCAGTTCGTTGCGCCCGCACCTCCTGTACCCACCACGCTGTCCGGGGGCGGAACCCCCCGCACCGCCTACTCCGTCACCCCCTCCTGGGTCCACTGA
Protein
MSIQGGGGYQSPWSSQTGLSELEGTMAELEPLGELAEVGFEPQTRARSNTWPLPRPDNYVEQVDEAGSKKNSNQNLSGAPPIPAKKNSSRRNAWGNLSYADLITQAITSAQDNRLTLSQIYEWMVQNVPYFKDKGDNNSSAGWKNSIRHNLSLHNRFMRVQNEGTGKSSWWMINPDAKPGKSVRRRAASMETSKFEKRRGRVKKKTEALRNGATADATPSPSSSVSESIDIFTDSPMHSSFQLSPDFRQRAPSNASSCGRLSPIPSMIPSEPDWKQEYANDYATNTDFSQADYTQEEQLAGSLADSMKLQGADPFLNPYVPTTSSSTSGGSFRYGSYGTCPRHPHGGCTCASMYSHPAHPAHPTHPHQHALDHFVRPPPSADQADIMQTGNRQTQMVTTSDPALMNGGMMVQAGGMGPTTVMGQIMGALNSGLVEDLNFEALEHGFDCNVDEVIKHELSMDGSLDFNFPQQQTAMAAEAESQFVAPAPPVPTTLSGGGTPRTAYSVTPSWVH

Summary

Pfam
PF16676   FOXO-TAD        + More
PF00250   Forkhead
PF16020   Deltameth_res
Interpro
IPR001766   Fork_head_dom        + More
IPR036388   WH-like_DNA-bd_sf       
IPR032067   FOXO-TAD       
IPR036390   WH_DNA-bd_sf       
IPR030456   TF_fork_head_CS_2       
IPR031973   Deltameth_res_prag01       
SUPFAM
SSF46785   SSF46785       
Gene 3D
PDB
4LG0     E-value=9.39121e-44,     Score=446

Ontologies

Topology

Subcellular location
Nucleus  
Length:
512
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03348
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00111
outside
1  -  512
 
 

Population Genetic Test Statistics

Pi
230.836886
Theta
184.010214
Tajima's D
0.894872
CLR
0.606943
CSRT
0.631518424078796
Interpretation
Uncertain
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