Gene
KWMTBOMO04860
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.817
Sequence
CDS
ATGGAGTTTTCTCCAACCAACACACTGCTCGCGGAATTCTTAAGCGAGAAATACCCGGCCCTCGAATCAGAATTTTTAGCTTACAAAGCTAAACGCGCCGTGAACTGTTCTGCCGTGCCCGCCGCGCCCGCCGTTTCCGCCACGCCTGCCGTTCCCGCGTCCCCTGCAAGCGCGCGCAAAACTCCCGCGCCGTACACCGCAGCCTCCGTCGCGCCCAGCACACCCGTGTCCCCCATACTGTCGCGAAAAACTCCCGCGTCTACCGCGGCAGCTTCCGTTTTACCTCAGCGATCGTCTGCGGCCTCCGTCGCGTCCGCCGCTCCCGCGCCTTCCTCCTCGTCCTCCGACTCTGACTCGGATATGGAGGTTGACCACGTTCCCGCCTCATTAACAGATGGATTCACTCTCGTGCAAAAGGGTAAGAAGCGCGCCGCGGAGTCCCGAGCTTCCGCGGCCGCTAAAATAAGCAAAGCCGCGAACGCGTCGCGCCCCCGCCCTCCGACCCCCGTCGCTCCCTGTCCCCGTGCCACGCCGTCGCCGCGCCCGGTGGCACAAACGAGAATTCAGGCCCCTCCTCCGTTGATTCTTCAAGAGAAGGCTGCTTGGGACCGTATCTCCCTGGCCCTTAAGGCCAAAAACATAAATTTTGTCAGTGCCCGTAACCTCGCGAACGGGATACAGATAAAAGTAGCAACACCCGACGACCATAGGGCCCTCTCAAGCTACCTCCGAAAGGAGCGTATAAGTTATCATACGTATACGCTCCAGGAGGAGCGTGAGCTCCGTGCAGTCATACGTGGCATCCCCAAGGAGTTAGATGCCGAGCTCGTAAAGGCCGACCTACTCGAACAAGGCCTACCCGTAAACTCCGTGCACCGCATGCACACAGGACGCGGGAGGGAGCCATACAATATGGTTCTCGTCGCCCTCCAGTCTACCCCCGAGGGTAAGAAAATCTTTAACGTCCGAACTGTCTGTAGGCTTTCCGGAATCACCGTGGAAACCCCTCATAAAAAAGGCACTCCGAGCCAGTGCCACAATTGTCAGTTGTACGGGCATTCTTCCCGTAATTGTCACGCGCGCCCTCGATGCGTCAAGTGTTTGGACGATCACGCCACGACTCTTTGCACTCGCGATCAAAAAACCGCGACGGAACCACCTAGCTGCGTCCTGTGCCGAACACAGGGTCACCCCGCGAATTACCGTGGATGCCCTCGAGCCCCTAAAATAAATCGCCGCGTCGCGCGTCAAAACCGCCTCCGAGCTTCCGGCCCTGACATCAAAGCCACGGCACCCTCTGTGCCGAAGGCTAAGCCTGCCTTCGTGCCGGCGCCGGTGCCCAGCGGCTCGGCCTGGGCTAAACCGTTGCCGTACACGAACACGGCTGTAGCTCCCTCCCCCGCGATTCGTCCCGTCCCCGCGATACGTCCCTCCCCCGTGATTCGTTCTTCCCCCGCGACCAGCACTCCGACCGCGTCCGACAATCTCGCTCTAGCGATCGACTTTTTTCAGTCGATCAACTTTGAGCGTGTTAATGCTTTGGGTGACGCCATTCGCGCCGCCTCCACTGCACAACACTTCATCGCCGTTGTGCAAGAATACGCTGACGTATACGCGTCGTTAAATACGTACGTCCTCCCCTCGCTCCGCCGGTAA
Protein
MEFSPTNTLLAEFLSEKYPALESEFLAYKAKRAVNCSAVPAAPAVSATPAVPASPASARKTPAPYTAASVAPSTPVSPILSRKTPASTAAASVLPQRSSAASVASAAPAPSSSSSDSDSDMEVDHVPASLTDGFTLVQKGKKRAAESRASAAAKISKAANASRPRPPTPVAPCPRATPSPRPVAQTRIQAPPPLILQEKAAWDRISLALKAKNINFVSARNLANGIQIKVATPDDHRALSSYLRKERISYHTYTLQEERELRAVIRGIPKELDAELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQSTPEGKKIFNVRTVCRLSGITVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLDDHATTLCTRDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRASGPDIKATAPSVPKAKPAFVPAPVPSGSAWAKPLPYTNTAVAPSPAIRPVPAIRPSPVIRSSPATSTPTASDNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
551
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02053
Exp number, first 60 AAs:
0.0063
Total prob of N-in:
0.00064
outside
1 - 551
Population Genetic Test Statistics
Pi
11.009118
Theta
10.785712
Tajima's D
0
CLR
0.067816
CSRT
0.378881055947203
Interpretation
Uncertain
