Silkworm Genome Informatics Database

Gene

KWMTBOMO04332 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014137

Annotation

PREDICTED:_zinc_finger_protein_33A-like_[Amyelois_transitella]

Location

Bomo_Chr8(+):3458310-3469268 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.509

CDS

ATGGACGAAGCTGATATTAAAACTGAAGACGACATGGTCTTGGTTATCGTTGAAGATGAACCCAGAGACGGGTACGAAGAGATTGTAAATAAATTTGAAAAAAATATAGAAGAGGAGTGTGATGTTGAGAATATGATAGAAACTGCAGCGAAACACGGTCATTTCATCGACATTAAAGTTGAACCTGCGGAAGAGGAGGACACATGGAGTCAGATTGATTATGACTACTGTGATATAAAAACTGAAAATGAGGATTATGAAAACTTTGATGATGATGACGATGGTCATCAAGAACAGGATTCTGAACCATTTGAGGATGTAGAATACTTATACGATGATGAAGAATATCTACCACCAAATGACATTGATATAAAATTAGGTAGGGGACAACGTAGAAGCTTACTGAGGCCTGATGAACAGAAGTCTTTTGTAAACGAACTAAGGGAGCAGTATCCTGAGTTGAGAAAGAACACCAAAAAGTTGGTGAATGCTGTCAGTGAGATTATGAGGGGCACTAAACCACCAAAGCCACCGAAAGGTAGCTTTGTTAAAAATGGAAATTACAGAGAGTGCACACTTTGCAATTGTTTGTCGGAATCCTTGCCAGCTGCCGAGAGACATTATCAAGAGAAACACGGCCAGAGATACCTAATCTGCTTTGCTTGCGGTGTGGATTTCAGGAGCAAAACAAACCTATATAAACACGAGAAGCGATGTATATCTTCAGACGCCACCATAGTGTTGAAAGCGCGGGCTTCGCTCCTTGGTAATAAGGCTCGAAGTCGTCCTTACATAAATCATTACAAGAATAAACCACCAAGAGTTTTCAAGTCCAACAAGAAGTTCCAATGCAGCGAATGCTCAGCAACGTTCACAGTTCAGAAGACATTAGATTCGCATATGAATCTCCACAAGGGCTTGAGACCGTACCGGTGTAAGACTTGTCCGGCTGCGTACACGTCGCCTACCGCTTTATCTCGCCACGAGAAGAAACATTTAGACGTTCAGTACATTTGCGATCACTGCGGCCGCGCGTTCAAGATCAAAGAAGCTCTGATACCTCACTTGGATACACACAAACCGTATCGCAAGTTCGGGTGCCACCTGTGCGACCGGCGGTACGCGCAGAAGGCGGCGCTGCAGCTGCACATCGACCGCGTGCACCGGAACCTGCCCCCGCCCTGCGCCTGCCCCGTCTGCCCCAAGAGGTTCCCCCGCATGTCTCTGCTGAAGACGCACATGATGAGCGAACACGGACTCAACATCATGACGCGTAAAATGTTCTTCAAGAAGCTGCCGACGCTATCGGAGTCCGAAATGAAGCAGGTCGCGAAGGTGATGCTCAAGAAGGACGTGGAGTCCGTGGCGTTCGGTGGCAGCGGCGCCCCGACCCCCGCACCCACCGGCGCTCCGCCCCCCGCGCCCGCCGGCGCCCCGCCCCCCGCACCCGCCCGCCAGCCGCCGCCGCCCGCGCCCGACCAGGAGTACATCGCCGGGGAAGAGATCGTGATCCCGGAGACTCTGTCCAGGGACGAGATGATCGACTTCCTGAAAAACTTGGACACCGGCGGCGACAAAACCCAAGTGTTCGTCATCAAAAACGGAGACTCCCTGAAGACCCTACAGGGATCCTTCAGCGATGTTATCTAG

Protein

MDEADIKTEDDMVLVIVEDEPRDGYEEIVNKFEKNIEEECDVENMIETAAKHGHFIDIKVEPAEEEDTWSQIDYDYCDIKTENEDYENFDDDDDGHQEQDSEPFEDVEYLYDDEEYLPPNDIDIKLGRGQRRSLLRPDEQKSFVNELREQYPELRKNTKKLVNAVSEIMRGTKPPKPPKGSFVKNGNYRECTLCNCLSESLPAAERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRCISSDATIVLKARASLLGNKARSRPYINHYKNKPPRVFKSNKKFQCSECSATFTVQKTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLDTHKPYRKFGCHLCDRRYAQKAALQLHIDRVHRNLPPPCACPVCPKRFPRMSLLKTHMMSEHGLNIMTRKMFFKKLPTLSESEMKQVAKVMLKKDVESVAFGGSGAPTPAPTGAPPPAPAGAPPPAPARQPPPPAPDQEYIAGEEIVIPETLSRDEMIDFLKNLDTGGDKTQVFVIKNGDSLKTLQGSFSDVI

Uniprot

H9JX72 A0A2A4J4K7 A0A194QA21 A0A212EPQ0 A0A194RG08

Pubmed

19121390 26354079 22118469

EMBL

BABH01032062 BABH01032063 NWSH01003426 PCG66322.1 KQ459302 KPJ01840.1 + More
AGBW02013410 OWR43472.1 KQ460211 KPJ16532.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000007151 UP000053240

PRIDE

H9JX72

Pfam

PF00096 zf-C2H2

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JX72 A0A2A4J4K7 A0A194QA21 A0A212EPQ0 A0A194RG08

PDB

2I13 E-value=1.79493e-14, Score=194

KEGG

101736657 no KO assigned | (RefSeq) zinc finger protein 287-like

GO

GO:0003676 GO:0046872 GO:0006351 GO:0008270 GO:0004672 GO:0005515 GO:0004674 GO:0009058 GO:0016742 GO:0003824

Length:

549

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00252

outside

1 - 549

Pi

228.626887

Theta

191.432292

Tajima's D

0.850203

CLR

0.531375

CSRT

0.620968951552422

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics