Gene
KWMTBOMO04070
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.035
Sequence
CDS
ATGGACGCTGTATTCGCGGAATTCCTCCGACTTCACCACCCACAGCTCGCCTCAGAGTTTCTGGCCTTCAAGGCCAATCACACTGCGAGCCCTCTCGAGGACTCCGCCGCGCTCGCTGCTCCTGCGTCGCCTGTACCTGCGTGCAAAGCTTCTGCATTGAGCAACGCAGCCTCCGTCGTGCCTGCCGCTCCCGTGTCGCCTATATTGGCGAGTAAAGCTGCTGCGTCGTCCGCTGTGACCATCGTTTCAGCTGAGCAATCATCCGCGGCCTCCGTCGCGCCCTCTAAAATACCTACACTTGCTCGTAGGTCGCCTGCACCCGCCTCCTCGTGCTCCGACTCTGATTCGGACATGGAGGTTGACCTCGCCCCCACCTCATCGACGGATGGATTCACCTTGGTACAGAAGGGTAAGAAGCGTGCCGCGGAGTCCCGAGCTCCCGCGGCCGCTAAAATTAGCAAAGCCGCGAACGCGTCGCACCCCCGCCCTCAGACTCCCGTTGCGCCCCCAGCCCGTGCCACTCCGTCGCCGCGTCCGGTGGCACTAAATAAAACCCAGACCCCTCCCCCGGTTATCCTTCAGGAGAAGGCAGCTTGGGATCGAGTTTGCCTGGCCCTTAAGGCCAAAAATATAAATTTCACGAATGCCCGTAACCTCGCGAACGGCATTCAAATTAAGGTTCAAACACCCGACGACCATAGGGCCCTCTCTTCTTACCTCCGTAAGGAACGTATAAGTTTCCATACGTATACGCTCCAGGAGGAGCGCGAACTCCGCGTTGTAATACGTGGAATCCCTAAAGAGTTAGATGTAGAGCTCGTCAAGGCCGATCTGTTAGAACAGGGCTTTCCAGTGAATTCTGTGCACCGTATGCACACCGGTCGCGGTAGGGAGCCATATAATATGGTTCTAGTCACCCTCCAGCCTACCCCCGAGGGTAAGAAAATCTTCAACACACAGGCCGTCTGTAGGCTCTCCGGTATCGCCGTCGAAGCCCCCCATAAAAAAGGCACTCCTAGCCAGTGCCATAACTGTCAACTGTACGGGCACTCTTCCCGTAACTGTCACGCGCGCCCCCGATGTGTTAAGTGTTTGGGCGATCACGCCACGGCCCTCTGCGCTCGCGACCAAAAAACCGCGACGGAACCGCCTAGCTGCGTCCTGTGTCAAACACAGGGTCACCCCGCAAATTACCGCGGATGCCCCCGAGCCCCGAAAATAAATCGCCGCGTCGCCCGCCAAAACCGCCTCCGAGCTTCCGGCCCAGACATCAAAGCCTCGGCACCCTCTGTGTCGCAGGCTAAGCCAGCGTTCGTTCCGGCGAAGGTGCCCAGTGTCTCGGCCTGGGCGAAACCGCTGTCGTATATGAACACGGCTACAATTCCCTCCTCCGCGATTCGTCCCGCCCCCGCGACTCGTCCCGCCCCCGCGACTCGTCCCTCTCCCGCGACTTGCCCTCCGACCGCGTCCGACAATCTCGCTTTAGCGATCGACTTCTTTCAGTCGATCAACTTTGAGCGCGTTAACGCTTTGGGCGACGCCATTCGCGCTGCCTCCACTGCACAACACTTTATCGCCGTTGTGCAAGAATACGCCGACGTATAA
Protein
MDAVFAEFLRLHHPQLASEFLAFKANHTASPLEDSAALAAPASPVPACKASALSNAASVVPAAPVSPILASKAAASSAVTIVSAEQSSAASVAPSKIPTLARRSPAPASSCSDSDSDMEVDLAPTSSTDGFTLVQKGKKRAAESRAPAAAKISKAANASHPRPQTPVAPPARATPSPRPVALNKTQTPPPVILQEKAAWDRVCLALKAKNINFTNARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQAVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCQTQGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKPAFVPAKVPSVSAWAKPLSYMNTATIPSSAIRPAPATRPAPATRPSPATCPPTASDNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADV
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
534
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00108
Exp number, first 60 AAs:
0.00026
Total prob of N-in:
0.00053
outside
1 - 534
Population Genetic Test Statistics
Pi
30.656666
Theta
36.654157
Tajima's D
3.199714
CLR
0
CSRT
0.986650667466627
Interpretation
Uncertain
