Gene
KWMTBOMO03365
Pre Gene Modal
BGIBMGA006396
Annotation
_Hox_cluster_protein_Shx15_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.157
Sequence
CDS
ATGCAACGTTTTCAACAACTTTCCTTTCCAACCAAAAAAAGCAAAAGAATAAGGAGCGCTTTCACTACTGAGCAAATAAATTATTTAGAAAATGAATTCAAGAAATCCCATTACATAAGTGCTGTACAACGTAAAGAAATAGCAAATATAGTAAATGTACCAGAGAAGGTAATTAAGATTTGGTTCCAAAACAGAAGAATGAGGGAAAAGAAAGAGTTATGTCTCATTGACAACTATGAAGAAGATGAAAGTTCACAGAACATACCATTTGTTCAAGATCCATCGAGCTACGCCAGTACATCAACACAGGACGCGTCCGTTTCATTGCCATTAATGAGTAATACTGTGGAAACTATTCCACAACCTGGTACTAGTAAACAAATTGATGATCTCAACAAATCGTATGATAAAGATAACGAAGAACAATTTTTGATTACAAATGAAGGCTCTACTCTATTCCCCTATTATATTGATTTATCTAAAAAAAACGAACATATCAAACAAAACTATCCAGAAAAAGCAAACATGAAAGCAACTGGAAATACAACAAAATCAATCAACCATAATCGAGAAAATCCGCTAGATTTATCACTGAAAAATAGTGTTGTAGAGAACCAGGGCGATATCACAGCAACAGCCGACAGCCCACGTATATTTCTAATTGATTCTCAGTCGTATATGCCTCCGAAAAATGTAATTGACAAACCTGTTATTCCAAGCTTGGGACAAGATATACCTGCGAGTACTTCAAAAACAAGCAATGAAAAGGAAGACAGTGAAAAAAAAAGCTGTTGTAAATGTAAAAAGAATGGTATTTCTTGGCCTGTATTATTTCATACCAATTCAACGAATTCTCAGTTCATACTAGCTGCTATAGAAATACCAAATCCTAATCCGCCAAAATGA
Protein
MQRFQQLSFPTKKSKRIRSAFTTEQINYLENEFKKSHYISAVQRKEIANIVNVPEKVIKIWFQNRRMREKKELCLIDNYEEDESSQNIPFVQDPSSYASTSTQDASVSLPLMSNTVETIPQPGTSKQIDDLNKSYDKDNEEQFLITNEGSTLFPYYIDLSKKNEHIKQNYPEKANMKATGNTTKSINHNRENPLDLSLKNSVVENQGDITATADSPRIFLIDSQSYMPPKNVIDKPVIPSLGQDIPASTSKTSNEKEDSEKKSCCKCKKNGISWPVLFHTNSTNSQFILAAIEIPNPNPPK
Summary
Uniprot
Proteomes
PRIDE
Pfam
PF00046 Homeodomain
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
1JGG
E-value=5.9035e-11,
Score=161
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
301
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00846
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01120
outside
1 - 301
Population Genetic Test Statistics
Pi
177.502195
Theta
152.350021
Tajima's D
0.449909
CLR
0.732555
CSRT
0.501874906254687
Interpretation
Uncertain
