Silkworm Genome Informatics Database

Gene

KWMTBOMO03284

Annotation

hypothetical_protein_RR46_03803_[Papilio_xuthus]

Location

Bomo_Chr6(-):3253997-3260955 View in EpiBrowser

Transcription factor

zf-BED

Location in the cell

Nuclear Reliability : 4.577

CDS

ATGAAAGAATTTCATCAGGACATTTACAATTTACATAAAGCTAATCCTGAAGCAAACGTTGGATTCCGCATTGAATTTCTACAAGTTAGCGTTCTGAATGATGAGATTAATCCTAAAACAACTCCAATATTACTTGAAGAGGTATGTGAAACCAATGAACCACCAAAAGAAATTGAACTGCCAGTCATCAATGAGGATGATGTCATCAATACACAGTATGTCATTGACAAAAAGAAGAAGAAAAGAAAAAGTGAAAATTCAGAGGCACGTAAACGAAGCTGGGTGTGGAAGTACTTCGACAAACTCAGCAACATTATATTCCGTTGTAATCTATGCAACGTCGTTCTCTCAATAAAAGGATGCAATACTAACAACATGAATAGACACGTGAGAACTCGGCATCCACAAATATACAGAAAAGAGGTATCCAAAAGAGTGACCTGTGATAATGCGGACATAAGCTCTGATATTGATACTCCGTATGCCATAAAGACTGAAGAAATATATGCGAGTGATCATAAAGACGTTGATCTTGACGATGTGGCTGAATCTCCAAGTCAAAAATTGCGTCGCAGTTGGATATGGTCATACTTCAGCCGCGTGACGTCAACCCAGGCGCAGTGCAAGCTCTGCAGCCGCCAGATCAGCCACGGCGGCAACGCTACCGGAAATATGAACAGACATCTCAAAATGATTCATAACAAGACAGCTGAGTATTCTGAAATCGAAAAGGGCAAAACGAAATGGATATGGAAAGTGTTTGAGGAGTGTGAAGACGACGCGTATTCGTGTAAAATCTGCCAGTTCAGATGCGAGAAGGGTGGCGACGAGATCACGAACGTGACGTCTATACTGTCGCACCTGAAGGTGGTGCACGGTGTCGTCTCCGGAGACCAGATCATAACCGGTCCCGACTGCGAACGCGACGAAGACGAAGATTGA

Protein

MKEFHQDIYNLHKANPEANVGFRIEFLQVSVLNDEINPKTTPILLEEVCETNEPPKEIELPVINEDDVINTQYVIDKKKKKRKSENSEARKRSWVWKYFDKLSNIIFRCNLCNVVLSIKGCNTNNMNRHVRTRHPQIYRKEVSKRVTCDNADISSDIDTPYAIKTEEIYASDHKDVDLDDVAESPSQKLRRSWIWSYFSRVTSTQAQCKLCSRQISHGGNATGNMNRHLKMIHNKTAEYSEIEKGKTKWIWKVFEECEDDAYSCKICQFRCEKGGDEITNVTSILSHLKVVHGVVSGDQIITGPDCERDEDED

Uniprot

A0A2A4IUG2 A0A2H1VL97 A0A1E1WIL5 A0A212EXS3 A0A194Q275 A0A1E1W179 + More
S4PDB3 A0A0N1IDW6 A0A1I8PEK1 A0A1I8MI49 T1PH21 A0A1I8MI47 A0A1I8MI45 A0A0M4ENH4 A0A1I8NBZ1 A0A1E1VYB9 A0A1E1W2Y5 B4K5Z3 A0A0Q9XE10 A0A3B1ICH4 A0A3B1IIM7 B4JYK7 A0A2D0SIS2 A0A132A3N6 A0A2D0SHJ8 A0A2D0SHK5 A0A182VUJ5

Pubmed

22118469 26354079 23622113 25315136 17994087 25329095 + More
26555130

EMBL

NWSH01007251 PCG63028.1 ODYU01002994 SOQ41192.1 GDQN01004204 JAT86850.1 + More
AGBW02011697 OWR46285.1 KQ459579 KPI99438.1 GDQN01010331 JAT80723.1 GAIX01005027 JAA87533.1 KQ460650 KPJ13100.1 KA648112 AFP62741.1 CP012526 ALC47165.1 GDQN01011337 GDQN01005951 JAT79717.1 JAT85103.1 GDQN01009717 JAT81337.1 CH933806 EDW16230.2 KRG02008.1 CH916377 EDV90769.1 JXLN01010384 KPM05607.1

Proteomes

UP000218220 UP000007151 UP000053268 UP000053240 UP000095300 UP000095301 + More
UP000092553 UP000009192 UP000018467 UP000001070 UP000221080 UP000075920

Pfam

PF02892 zf-BED + More
PF04500 FLYWCH

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR007588   Znf_FLYWCH
IPR003656   Znf_BED
IPR037220   BED_dom

SUPFAM

SSF57667 SSF57667 + More
SSF140996 SSF140996

ProteinModelPortal

A0A2A4IUG2 A0A2H1VL97 A0A1E1WIL5 A0A212EXS3 A0A194Q275 A0A1E1W179 + More
S4PDB3 A0A0N1IDW6 A0A1I8PEK1 A0A1I8MI49 T1PH21 A0A1I8MI47 A0A1I8MI45 A0A0M4ENH4 A0A1I8NBZ1 A0A1E1VYB9 A0A1E1W2Y5 B4K5Z3 A0A0Q9XE10 A0A3B1ICH4 A0A3B1IIM7 B4JYK7 A0A2D0SIS2 A0A132A3N6 A0A2D0SHJ8 A0A2D0SHK5 A0A182VUJ5

KEGG

101735513 no KO assigned | (RefSeq) uncharacterized LOC101735513

GO

GO:0003677 GO:0006644 GO:0050482 GO:0005509 GO:0016042 GO:0016020 GO:0005634 GO:0006270 GO:0042555 GO:0048384 GO:0003676

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00790999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04151

outside

1 - 313

Pi

159.666002

Theta

176.830634

Tajima's D

-0.823156

CLR

0.668228

CSRT

0.174641267936603

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics