Gene

KWMTBOMO02797

Pre Gene Modal

BGIBMGA009412

Annotation

PREDICTED:_uncharacterized_protein_LOC106716651_[Papilio_machaon]

Location

Bomo_Chr5(+):11411815-11415821      View in EpiBrowser

Transcription factor

THAP

Location in the cell

Mitochondrial   Reliability : 4.038

CDS

ATGCTGTTACGTCCCTTCCATACATTTCCGAATCCACAAAGTTTGATAATAGAACAAATTGAGAGATTTAATAAATGGAAATCTGTACTAAGTGCAGAATCTCAGGAAAAGGGTGAAAAATACATATATAACAACATTCGTCTTTGCAACAGACATTTTGAAAAGTGCTTCATACTACCATCAAATAGACTTACTCAAAATTCAGTCCCAACATTATTTCTTGGACTAAATTATGCAGCTCACATCGAAATTGATCAGCCACAGTTGTTGAGTGGAATTGTGCCGCCTTCAAGTATGAACAATATGATAAAACTTGAAAGTGTATCATACAGAACCTTGAAGAAGAGCTCAAATTCTAATTTGACATATTTGAAATTGATGTCACAAGTAAAAGTGTTAAAGGATAAATGTAGAAAGCAAAAAGATGATATTAAAATGGCAAAGAAGCTTTCCAGGACTAAAGTTTTTCTTAAATACATAGATAAATTACCTGAACCTATAAATCTTTTTACAAAGATGCAATTAAAAAATGCATCTAAGCCTAGAGGGAGGAGATTTTCTCTAAATGAGAAAATTATGTCATTAACTATTCTAAAGCAGAGTCCGAAGGCATATAATTATTTAAGACAGATGTTTGTTTTACCATCAAAACGAAGCCTTCAGACTTTGCTTAGTTTATTTTCTGTCAAACCGGGTTTGAATCTACACATTTTAAAAGATTTACAATCTGCAGTGAGGCTAATGCCTGACGAGAAAAGAATTGTGAATCTAATGTTTGATGAAATATCACTTTGTCCTGGAGTGACCTATGATCCTGATATAGATGCAGTGATAGGATTTGAGGATATGGGATCTAATAGTAGGAATAAAACTCTGGCTGACCATGCACTTGTATTTATGATTAAGAGTGTCAAAAGTAAAAGCAAACAACCCATTTGTTTTACTTTTTGTAAAAGTTCAACAAAAGCTATACACCTAAAAAACCTCATAAAAAATATTGTGCTAGAATTACAAAACATTGGTTTTATTGTTATTACAGTTATTTGCGATCAAGCCAGGACAAATGTCAACGCACTAAAGAACTTACATCAGGATACAAGGGAGAAATATTTGAAGGAAGGACATGGAGATTACATAGAAAAAGCCATTGAAATTGGCGGAAAAAAAATATTTCCTCTATTTGATCCACCACATTTATTGAAAGGTGTGAGAAATAATTTACTGATCAAAGATGCTTTATTTGTGCAGGATGGTGTCATGAAGCGAGCAAAATGGGATCATATTAGAATGTTGTTGGATGTGGATGATGGTGATGACGAAATTAGATTAGTCAATAAACTGACGGAAGCACATGTTATTAAAGAAAAGATCCCAAAAATGAAAGTGAAATTTGCTGCACAAATATTCAGTCAAAGAGTCTCATCAGCTATGAGATTCCTTGCAAGTGAGTGTTGTATATGA

Protein

MLLRPFHTFPNPQSLIIEQIERFNKWKSVLSAESQEKGEKYIYNNIRLCNRHFEKCFILPSNRLTQNSVPTLFLGLNYAAHIEIDQPQLLSGIVPPSSMNNMIKLESVSYRTLKKSSNSNLTYLKLMSQVKVLKDKCRKQKDDIKMAKKLSRTKVFLKYIDKLPEPINLFTKMQLKNASKPRGRRFSLNEKIMSLTILKQSPKAYNYLRQMFVLPSKRSLQTLLSLFSVKPGLNLHILKDLQSAVRLMPDEKRIVNLMFDEISLCPGVTYDPDIDAVIGFEDMGSNSRNKTLADHALVFMIKSVKSKSKQPICFTFCKSSTKAIHLKNLIKNIVLELQNIGFIVITVICDQARTNVNALKNLHQDTREKYLKEGHGDYIEKAIEIGGKKIFPLFDPPHLLKGVRNNLLIKDALFVQDGVMKRAKWDHIRMLLDVDDGDDEIRLVNKLTEAHVIKEKIPKMKVKFAAQIFSQRVSSAMRFLASECCI

Uniprot

H9JIR1   A0A194QQL0   A0A0N1IC55   A0A2H1VJ77   A0A2A4JPP6   X1XB84   + More
A0A2A4JYS8   A0A2A4JY71   J9KSA4   J9M961   A0A2A4JZ58   J9M4P5   J9LEP6   A0A2S2NC74   J9LX62   J9LY75   A0A0L7K5T4   X1XC48   A0A2S2P628   J9KEF2   J9KEP3   J9L7T1   A0A2H8TYS2   A0A1Y1NI49   J9M9N1   A0A1Y1LY36   A0A1Y1K6U6   X1XAX4   J9KX16   A0A2S2P5T9   A0A139W9L5   J9LQD8   D6X0C0   J9L5B6   A0A2S2P9C5   A0A139W8P5   J9KFX0   A0A1Y1KFJ5   A0A1Y1KI01   A0A1Y1KN14   J9L862   E9J9D7   A0A1Y1NHP2   X1X0R9   A0A1Y1NHU8   J9KGM8   J9LCP7   J9KCB1   D7EKX8   A0A1Y1KTH5   A0A087SV38  

Pubmed

19121390    26354079    26227816    28004739    18362917    19820115    + More
21282665   

EMBL

BABH01032897    KQ461175    KPJ07793.1    KQ461059    KPJ09927.1    ODYU01002680    + More
SOQ40482.1    NWSH01000959    PCG73380.1    ABLF02011758    ABLF02011759    NWSH01000363    PCG76969.1    PCG76967.1    ABLF02016553    ABLF02016555    ABLF02049531    ABLF02011948    PCG76968.1    ABLF02008684    ABLF02008686    ABLF02008687    ABLF02010326    ABLF02010327    GGMR01002126    MBY14745.1    ABLF02019656    ABLF02019662    ABLF02041486    ABLF02012658    JTDY01010331    KOB58244.1    ABLF02005638    ABLF02005639    GGMR01012308    MBY24927.1    ABLF02028679    ABLF02056730    ABLF02017444    ABLF02017696    GFXV01007611    MBW19416.1    GEZM01001796    JAV97521.1    ABLF02017692    ABLF02017693    GEZM01045715    JAV77678.1    GEZM01090725    JAV57179.1    ABLF02054892    ABLF02023911    GGMR01011939    MBY24558.1    KQ972202    KYB24605.1    ABLF02008211    ABLF02008212    ABLF02008213    ABLF02011424    ABLF02042790    KQ971372    EFA10524.2    ABLF02007924    GGMR01012897    MBY25516.1    KQ973114    KXZ75664.1    ABLF02014046    ABLF02014054    ABLF02014055    ABLF02015166    ABLF02066528    GEZM01085093    JAV60239.1    GEZM01085094    JAV60238.1    GEZM01085095    JAV60237.1    ABLF02003317    GL769271    EFZ10565.1    GEZM01001982    JAV97423.1    ABLF02028653    ABLF02048521    ABLF02061836    ABLF02064667    GEZM01001983    JAV97421.1    ABLF02012220    ABLF02012222    ABLF02053218    ABLF02009194    ABLF02014670    DS497781    EFA11724.1    GEZM01074010    JAV64699.1    KK112098    KFM56727.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007819    UP000037510    UP000007266    + More
UP000054359   

PRIDE

H9JIR1   

Pfam

PF12017   Tnp_P_element        + More
PF05485   THAP
PF05699   Dimer_Tnp_hAT
PF14291   DUF4371
PF00005   ABC_tran
PF00664   ABC_membrane
PF02037   SAP

Interpro

IPR021896   Transposase_37        + More
IPR038441   THAP_Znf_sf       
IPR006612   THAP_Znf       
IPR008906   HATC_C_dom       
IPR025398   DUF4371       
IPR003593   AAA+_ATPase       
IPR011527   ABC1_TM_dom       
IPR027417   P-loop_NTPase       
IPR036640   ABC1_TM_sf       
IPR030244   Yor1       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR006580   Znf_TTF       
IPR012337   RNaseH-like_sf       
IPR023378   YheA/YmcA-like_dom_sf       
IPR036361   SAP_dom_sf       
IPR003034   SAP_dom       

SUPFAM

SSF90123   SSF90123        + More
SSF52540   SSF52540       
SSF53098   SSF53098       
SSF158622   SSF158622       

Gene 3D

3.30.40.180     1.20.1560.10     1.10.720.30    

ProteinModelPortal

H9JIR1   A0A194QQL0   A0A0N1IC55   A0A2H1VJ77   A0A2A4JPP6   X1XB84   + More
A0A2A4JYS8   A0A2A4JY71   J9KSA4   J9M961   A0A2A4JZ58   J9M4P5   J9LEP6   A0A2S2NC74   J9LX62   J9LY75   A0A0L7K5T4   X1XC48   A0A2S2P628   J9KEF2   J9KEP3   J9L7T1   A0A2H8TYS2   A0A1Y1NI49   J9M9N1   A0A1Y1LY36   A0A1Y1K6U6   X1XAX4   J9KX16   A0A2S2P5T9   A0A139W9L5   J9LQD8   D6X0C0   J9L5B6   A0A2S2P9C5   A0A139W8P5   J9KFX0   A0A1Y1KFJ5   A0A1Y1KI01   A0A1Y1KN14   J9L862   E9J9D7   A0A1Y1NHP2   X1X0R9   A0A1Y1NHU8   J9KGM8   J9LCP7   J9KCB1   D7EKX8   A0A1Y1KTH5   A0A087SV38  

KEGG

105842285    no KO assigned | (RefSeq) uncharacterized LOC105842285

GO

GO:0004803   GO:0006313   GO:0003677   GO:0046983   GO:0003676   GO:0016020   GO:0005524   GO:0042626   GO:0016021   GO:0055085   GO:0043565   GO:0006506   GO:0016740   GO:0004889   GO:0005216   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR24223:SF271  

Length:

486

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01593

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00032

outside

1  -  486

 

 

Pi

224.913976

Theta

188.127368

Tajima's D

0.811294

CLR

0.536727

CSRT

0.601369931503425

Interpretation

Uncertain