Gene

KWMTBOMO02748  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003718

Annotation

PREDICTED:_translocating_chain-associated_membrane_protein_1_[Amyelois_transitella]

Location

Bomo_Chr5(-):10044955-10049526      View in EpiBrowser

Full name

Translocating chain-associated membrane protein      

Transcription factor

TRAM_LAG1_CLN8

Location in the cell

PlasmaMembrane   Reliability : 4.54

CDS

ATGGGTGTAAAGCCTGCTATTGGACGAAAAACTAACAAAAACCCTCCCATCTTCAGTCATGAATTTGTAATTCAAAATCATGCAGATATTGTTTCATGTGTTGTTATGGTTTTCCTGGTTGGATTGATGGTACAGTCTACAAGTCCCATTGCAAGCTTGTTCATCAGTTTACATCACAATGTCAGTGGAGTGGAACCAACGAGAGAAGCGCCGAAAGGCGAACCTTTTACTTATGAATCTGGGTGGAAAGATGCTTGTGCCGTGTTTTTCTATTCACTTGTCTGTATTGTGATGCATGCTATTCTTCAGGAGTACTTCCTTGATAAAATTTCCAAGAAGTTCCACCTCTCAAAATCAAGGTTAAGTGCTCTCAATGAATCTGGACAACTTATAGTATTCCATCTCGTAACTCTGGTATGGGGTGGTGATGCTATACTCCGGGAAGGTTTCATTTTCAACATCTCTCAGCTTTGGGAAGGCTACCCAGTGCACCCAATGAGCTTCCTTCTCAAGTTATGGTGGGTTGTCCAAGCTTCCTATTGGTTGCACACAATCCCCGAACTGTACTTCCAACGTATAAAGAAAGATGAGTGGGCAGGACGCATACGAAATGCTGCTACAGCTTTTGGTTTTGTAGCATTGGCTTATGGATTTAATTTCCAACGCGTGGGAGTGTGCCTAGTTGTTCTTCATGCCCTGGCAGAATTTGTGGCACATTGCTATCGTCTCAACACAATCCTCAGGGGAGAACGTGAAGATTTCTTGGACAAGTTTCTAAGTCTTGTAAACGGGACAGTGTTCGTGATCGTTCGCTTGTTCTCTCTCGTCCTTGGAGTGCTTACTTTCTACTTCGGACTCGCCGGTGTCGCACCCTTACTGGTCAGAGTGGCTGCTCTGTCCTTGCTTGTCTCTTTCCAGGTCTACTTGATGTTTAACTTCATATCTGAAGCTATTAAGCAGAGGCAAGAAGCTCGTCAGCAGGCTCTCGCGCGACCTCTCAAGAAAGAGAAGAAGGAAAAACCCAAAAAGGAAAAGGTGAAAAAAGCTCCCGTCGACGAGTCTGACCTGCCCGAGGTGGATCAGAACACGAACAAGACCCTGAGGCAGCGACAGAACGCGACCGCTAAAGCGAAGTGA

Protein

MGVKPAIGRKTNKNPPIFSHEFVIQNHADIVSCVVMVFLVGLMVQSTSPIASLFISLHHNVSGVEPTREAPKGEPFTYESGWKDACAVFFYSLVCIVMHAILQEYFLDKISKKFHLSKSRLSALNESGQLIVFHLVTLVWGGDAILREGFIFNISQLWEGYPVHPMSFLLKLWWVVQASYWLHTIPELYFQRIKKDEWAGRIRNAATAFGFVALAYGFNFQRVGVCLVVLHALAEFVAHCYRLNTILRGEREDFLDKFLSLVNGTVFVIVRLFSLVLGVLTFYFGLAGVAPLLVRVAALSLLVSFQVYLMFNFISEAIKQRQEARQQALARPLKKEKKEKPKKEKVKKAPVDESDLPEVDQNTNKTLRQRQNATAKAK

Similarity

Belongs to the TRAM family.

Uniprot

H9J2I1   A0A1E1VYA7   A0A2H1W945   A0A2A4K038   S4PMB1   A0A194RGP2   + More
A0A194PNH1   I4DMD6   A0A212FIW6   A0A0L7LF08   A0A1Q3FCN0   A0A1Q3FCR6   B0W8F6   A0A182HEC5   T1D460   B4JKV7   Q9W5C2   Q1HRQ8   D3TMN1   B4R2K4   B4I980   U5EL95   B4MD36   Q9U1L3   B3P9C1   A0A1W4VFG8   W8B8S1   B3MYD3   A0A1L8EFC1   A0A1B6GYL8   A0A1L8DUN4   T1PBH6   B4L3R6   A0A0K8TPL5   A0A0L0BWV7   A0A336LYK3   A0A336ME24   A0A1A9W8R8   A0A3B0K4J4   A0A1B0DJR7   A0A1I8PHX3   A0A1B6G4W2   A0A0M4EQE8   A0A182NVB6   A0A1B0BNV5   Q29FN4   B4GTT6   A0A1A9XNK5   A0A182F429   A0A2M4A0T8   A0A182YE61   A0A2M4BR54   W5JSJ2   A0A2M3YZ95   A0A0A1X5B0   A0A1A9Z6B9   A0A1B6MD38   A0A182IS04   A0A182Q1V5   Q7QDS0   T1E886   A0A182XA65   A0A182LN48   A0A182HX44   A0A182W8A7   A0A1I8JUJ7   B4ND58   A0A182TN47   A0A067RFZ3   A0A1B6I607   A0A0K8VI85   A0A182UXW6   A0A1B0FHK9   A0A034WL29   A0A1B6M6F2   A0A1J1IIZ6   A0A2R7W525   R4WSP0   A0A2J7QF41   A0A2P8ZEY3   A0A0P6GCW7   A0A0P6IIP4   E9H3M1   A0A0P6ACZ2   T1IL87   A0A0P5ZJ58   A0A1Q3FCT1   A0A1Q3FCW1   A0A1W7R9H0   A0A1E1X8Z1   A0A2I9LPV4   A0A0A9YUL5   A0A0P5VGG1   A0A0P5YN84   A0A0A9YM22   A0A154NZU2   A0A0P5U6B2   E1ZWE7   A0A1E1XUQ5  

Pubmed

19121390    23622113    26354079    22651552    22118469    26227816    + More
26483478    24330624    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17204158    17510324    20353571    24495485    25315136    18057021    26369729    26108605    15632085    25244985    20920257    23761445    25830018    12364791    14747013    17210077    20966253    24845553    25348373    23691247    29403074    21292972    28503490    29248469    25401762    26823975    20798317    29209593   

EMBL

BABH01007979    GDQN01011382    JAT79672.1    ODYU01007126    SOQ49625.1    NWSH01000300    + More
PCG77631.1    GAIX01003660    JAA88900.1    KQ460207    KPJ16757.1    KQ459597    KPI94867.1    AK402454    BAM19076.1    AGBW02008321    OWR53676.1    JTDY01001343    KOB74138.1    GFDL01009728    JAV25317.1    GFDL01009757    JAV25288.1    DS231858    EDS38885.1    JXUM01035264    JXUM01035265    JXUM01035266    JXUM01035267    JXUM01035268    JXUM01035269    KQ561053    KXJ79861.1    GALA01001088    JAA93764.1    CH916370    EDW00210.1    AE014298    AY075393    AAF45569.1    AAL68227.1    DQ440036    CH477268    ABF18069.1    EAT45439.1    EZ422683    ADD18959.1    CM000366    EDX16804.1    CH480825    EDW43761.1    GANO01001501    JAB58370.1    CH940660    EDW58108.1    AL109630    CAB65875.1    CH954183    EDV45417.1    GAMC01016979    JAB89576.1    CH902632    EDV32627.2    GFDG01001389    JAV17410.1    GECZ01002255    JAS67514.1    GFDF01003947    JAV10137.1    KA646121    AFP60750.1    CH933810    EDW07194.1    GDAI01001522    JAI16081.1    JRES01001224    KNC24491.1    UFQT01000229    SSX22091.1    UFQS01001037    UFQT01001037    SSX08679.1    SSX28594.1    OUUW01000018    SPP89124.1    AJVK01001037    GECZ01012348    JAS57421.1    CP012528    ALC48152.1    JXJN01017617    JXJN01017618    CH379065    EAL31545.1    CH479190    EDW25956.1    GGFK01001105    MBW34426.1    GGFJ01006398    MBW55539.1    ADMH02000590    ETN65729.1    GGFM01000839    MBW21590.1    GBXI01008206    JAD06086.1    GEBQ01006130    JAT33847.1    AXCN02002291    AAAB01008849    EAA07097.3    GAMD01002392    JAA99198.1    APCN01005128    CH964239    EDW82767.1    KK852528    KDR21973.1    GECU01025348    JAS82358.1    GDHF01014084    JAI38230.1    CCAG010014883    GAKP01003593    JAC55359.1    GEBQ01008468    JAT31509.1    CVRI01000048    CRK99038.1    KK854225    PTY13315.1    AK417727    BAN20942.1    NEVH01015301    PNF27221.1    PYGN01000077    PSN55048.1    GDIQ01035088    LRGB01000763    JAN59649.1    KZS16088.1    GDIQ01004033    JAN90704.1    GL732589    EFX73674.1    GDIP01031014    JAM72701.1    JH430751    GDIP01042811    JAM60904.1    GFDL01009695    JAV25350.1    GFDL01009696    JAV25349.1    GFAH01000600    JAV47789.1    GFAC01003712    JAT95476.1    GFWZ01000420    MBW20410.1    GBHO01010344    GDHC01016521    JAG33260.1    JAQ02108.1    GDIP01100596    JAM03119.1    GDIP01056272    JAM47443.1    GBHO01010345    GBRD01007298    GDHC01005997    JAG33259.1    JAG58523.1    JAQ12632.1    KQ434786    KZC05102.1    GDIP01121253    JAL82461.1    GL434819    EFN74493.1    GFAA01000578    JAU02857.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000002320    UP000069940    UP000249989    UP000001070    UP000000803    UP000008820    UP000000304    UP000001292    UP000008792    UP000008711    UP000192221    UP000007801    UP000095301    UP000009192    UP000037069    UP000091820    UP000268350    UP000092462    UP000095300    UP000092553    UP000075884    UP000092460    UP000001819    UP000008744    UP000092443    UP000069272    UP000076408    UP000000673    UP000092445    UP000075880    UP000075886    UP000007062    UP000076407    UP000075882    UP000075840    UP000075920    UP000075900    UP000007798    UP000075902    UP000027135    UP000075903    UP000092444    UP000183832    UP000235965    UP000245037    UP000076858    UP000000305    UP000076502    UP000000311   

PRIDE

H9J2I1    Q9W5C2    Q9U1L3   

Pfam

PF08390   TRAM1        + More
PF03798   TRAM_LAG1_CLN8

Interpro

IPR013599   TRAM1        + More
IPR006634   TLC-dom       
IPR016447   Translocation_assoc_membrane       
IPR016439   Lag1/Lac1-like       

ProteinModelPortal

H9J2I1   A0A1E1VYA7   A0A2H1W945   A0A2A4K038   S4PMB1   A0A194RGP2   + More
A0A194PNH1   I4DMD6   A0A212FIW6   A0A0L7LF08   A0A1Q3FCN0   A0A1Q3FCR6   B0W8F6   A0A182HEC5   T1D460   B4JKV7   Q9W5C2   Q1HRQ8   D3TMN1   B4R2K4   B4I980   U5EL95   B4MD36   Q9U1L3   B3P9C1   A0A1W4VFG8   W8B8S1   B3MYD3   A0A1L8EFC1   A0A1B6GYL8   A0A1L8DUN4   T1PBH6   B4L3R6   A0A0K8TPL5   A0A0L0BWV7   A0A336LYK3   A0A336ME24   A0A1A9W8R8   A0A3B0K4J4   A0A1B0DJR7   A0A1I8PHX3   A0A1B6G4W2   A0A0M4EQE8   A0A182NVB6   A0A1B0BNV5   Q29FN4   B4GTT6   A0A1A9XNK5   A0A182F429   A0A2M4A0T8   A0A182YE61   A0A2M4BR54   W5JSJ2   A0A2M3YZ95   A0A0A1X5B0   A0A1A9Z6B9   A0A1B6MD38   A0A182IS04   A0A182Q1V5   Q7QDS0   T1E886   A0A182XA65   A0A182LN48   A0A182HX44   A0A182W8A7   A0A1I8JUJ7   B4ND58   A0A182TN47   A0A067RFZ3   A0A1B6I607   A0A0K8VI85   A0A182UXW6   A0A1B0FHK9   A0A034WL29   A0A1B6M6F2   A0A1J1IIZ6   A0A2R7W525   R4WSP0   A0A2J7QF41   A0A2P8ZEY3   A0A0P6GCW7   A0A0P6IIP4   E9H3M1   A0A0P6ACZ2   T1IL87   A0A0P5ZJ58   A0A1Q3FCT1   A0A1Q3FCW1   A0A1W7R9H0   A0A1E1X8Z1   A0A2I9LPV4   A0A0A9YUL5   A0A0P5VGG1   A0A0P5YN84   A0A0A9YM22   A0A154NZU2   A0A0P5U6B2   E1ZWE7   A0A1E1XUQ5  

KEGG

101745731    K14010 translocating chain-associated membrane protein 1 | (RefSeq) translocating chain-associated m

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0006616   GO:0005623   GO:0016021   GO:0005791   GO:0005634   GO:0008270   GO:0046872   GO:0005667   GO:0005737   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR12371  

Length:

378

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

130.71716

Exp number, first 60 AAs:

21.77987

Total prob of N-in:

0.96882

POSSIBLE N-term signal

sequence

inside

1  -  32

TMhelix

33  -  55

outside

56  -  84

TMhelix

85  -  107

inside

108  -  266

TMhelix

267  -  289

outside

290  -  292

TMhelix

293  -  315

inside

316  -  378

 

 

Pi

219.205246

Theta

155.174865

Tajima's D

1.20427

CLR

0.005223

CSRT

0.71966401679916

Interpretation

Uncertain