Gene
KWMTBOMO02684
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.101
Sequence
CDS
ATGACTTACGCGAGTGTGGTGTTCGCTCACGCGGCCCGCACACACATAGACACCCTTCAATCTCTACAATCCCGCTTTTGCAGAATCGCTTCGGCCAATTTAGTGTTACCGACGCAGGGGCCTCGCCGCAAGGCGAGCGCGTGTTTAAGTCCCGGGGCAGCCCCCCCTGGGCAGTCCGAAGAAATGGAGTTCTCTCCAACCAACACACTGCTCGCGGAATTCTTAAGCGAGAAATACCCGGCCCTCGAATCAGAATTTTTAGCTTACAAAGCTAAACGCGCCGTGAACTGTTCTGCCGTGCCCGCCGCGCCCGCCGTTTCCGCCACGCCTGCCGTTCCCGCGTCCCCTTCAAGCGCGCGCAAAACTCCCGCGACATACACCGCAGCCTCCGTCGCGCCCAGCACACCCGTGTCCCCCATACTCCCGCGAAAAACTCCCGCGTCTACCGCGGCAGCTTCCGTTCTACCTCAGCGATCGTCTGCGGCCTCCGTCGCGTCCGCCGCTCTCGCGCCTTCCTCCTCGTCCTCCGACTCTGACTCGGATATGGAGGTTGACCTCGTTCCCGCCTCATTGACAGATGGATTCACCCTCGTGCAAAAGGGTAAGAAGCGTGCCGCGGAGTCCCGAGCTTCCGCGGCCGCTAAAATAAGCAAAGCCGCGAACGCGTCGCGCCCCCGTCCTCCGACCCCCGTCGCTCCCTGTCCCCGTGCCACGCCGTCGCCGCGCCCGGTGGCACAAACGAAAAATCAGGCCCCTCCTCCGTTGATTCTTCAAGAGAAGGCTGCTTGGGACCGTGTCTCCCTGGCCCTTAAGGCCAAGAACATAAAATTTGTCAGTGCCCGTAACCTCGCGAACGGGATACAGATAAAAGTAGCAACACCCGACGACCATAGGGCCCTCTCAAGCTACCTCCGAAAGGAGCGTATAAGTTATCATACGTATACGCTCCAGGAGGAGCGTGAGCTCCGTGTAGTCATACGTGGCATCCCCAAGGAGTTAGATGCCGAGCTCGTAAAGGCCAACCTACTCGAACAAGGCCTACCCGTAAACTCCGTGCACCGCATGCACACAGGACGCGGGAGGGAGCCATACAATATGGTTCTCGTCGCCCTCGAGTCTACCCCCGAGGGTAAGCAAATCTTTAACGTCCGAACGGTCTGTAGGCTTTCCGGAATCACCGTGGAAACCCCTCATAAAAAAGGCACTCCGAGCCAGTGCCACAATTGTCAGCTGTACGGGCATTCTTCCCGTAATTGTCACGCGCGCCCTCGATGCGTCAAGTGTTTGGACGATCACGCCACGACTCTTTGCACTCGCGATCAAAAAACCGCGACGGAACCACCTAGCTGCGTCCTGTGCCGCACACAGGGTCACCCCGCGAATTACCGTGGATGCCCCCGAGCACCTAAAATAAATCGCCGCGTCGCGCGCCAAAACCGCCTCCGAGCTTCCGGCCCTGACATCAAAGCCACGGCACCCTCTGTGCCGAAGGCTAAGCCTGCCTTCGTGCCGGCGCCGGTGCCCAGCGGCTCGGCCTGGGCTAAACCGTTGCCGTACACGAACACGGCTGTAGCTCCCTCCCCCGCGATTCATCCCGCCCCCGCGATACGTCCCTCCCCCGTGATTCGTTCCCCCGCGACCAGCACTCCGACCGCGTCCGACAATCTCGCTCTAGCGATCGACTTTTTTCAGTCGATCAACTTTGAGCGTGTTAATGCTTTGGGTGACGCCATTCGCGCCGCCTCCACTGCACAACATTTCATCGCCGTTGTGCAAGAATACGCTGACGTATACGCGTCGTTAAATACGTACGTCCTCCCCTCACTCCGCCGGTAA
Protein
MTYASVVFAHAARTHIDTLQSLQSRFCRIASANLVLPTQGPRRKASACLSPGAAPPGQSEEMEFSPTNTLLAEFLSEKYPALESEFLAYKAKRAVNCSAVPAAPAVSATPAVPASPSSARKTPATYTAASVAPSTPVSPILPRKTPASTAAASVLPQRSSAASVASAALAPSSSSSDSDSDMEVDLVPASLTDGFTLVQKGKKRAAESRASAAAKISKAANASRPRPPTPVAPCPRATPSPRPVAQTKNQAPPPLILQEKAAWDRVSLALKAKNIKFVSARNLANGIQIKVATPDDHRALSSYLRKERISYHTYTLQEERELRVVIRGIPKELDAELVKANLLEQGLPVNSVHRMHTGRGREPYNMVLVALESTPEGKQIFNVRTVCRLSGITVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLDDHATTLCTRDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRASGPDIKATAPSVPKAKPAFVPAPVPSGSAWAKPLPYTNTAVAPSPAIHPAPAIRPSPVIRSPATSTPTASDNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
611
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02339
Exp number, first 60 AAs:
0.00056
Total prob of N-in:
0.00113
outside
1 - 611
Population Genetic Test Statistics
Pi
102.082346
Theta
23.339532
Tajima's D
0.550511
CLR
0
CSRT
0.539773011349433
Interpretation
Uncertain
