Gene

KWMTBOMO02574

Pre Gene Modal

BGIBMGA002615

Annotation

PREDICTED:_uncharacterized_protein_LOC106124467_[Papilio_xuthus]

Location

Bomo_Chr5(+):5973657-5985976      View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear   Reliability : 4.049

CDS

ATGTGTTTGATACGATCGTGTAAAACTTTGCCGGTCCATTGTGTGGTGGAAGCCGTGTCTTCGTTGGAGGAGAGTAATTGGAGACGACGTGCCATCGTTGAAACAGACAGTTACGTCATAATTCCTGCCGCCACGGCGTTCCATGAGCTGGTGCCGGCGGCCATGATGAGGCTTGGATATCCTCATGAGCTAGCTGCTTCTGCTAAAGGCTCAGTGGTGATAAACAATTGGAAGCCGCTTCCATTCGAGAGGATCTCGGACGGGCCGCTCGCTACTGTGGGTGAAGTGCTCGGGGAACTGACGACCGTCGCCACATTGAGGATCCAGCTGCTGAGACCGAGGCCTACTCCCCTCCAAGACATAAAGGACAAGCTGCTCAGGCTTTTATTGGTCCAGAGCAGACCGTTGCTTATGTCAACCGGATGCCCTCTAGATGAGATTACTCTAGCTCAGATATGCCGTGGTCAAGATAGGACACCGGGGCCTCACAACTTTCACGAACCATCAGAAGATATGAGAAGGAAATTTGAGTCTTGGTGGACCGCACAGGTATCCCCACGGCCCCCGCCGTTCAGTCCTCGTCGTTATCCCTCTCCAGGACCGAAAAATCGATCGCCAACATTGAACAGCATTCCAGATCACTTACATCCCGCATTGCAAACCGTGCAAAGTCAATATCCAACTCAAAAAACACGTATGAGAACCAGTTTCGATCCCGAATTGGAATTACCGAAACTGCAACGCTGGTTCGCCGAAAACCAACATCCGAGCAGACAACAAATACAGCAATACGTGCGAGAACTGAATAATTTGGAATCGAGACGTGGTCGTAAGCCTCTGGATGTAAACAATGTCGTCTATTGGTTCAAGAATGCTCGTGCGGCTCAGAAGCGAGCAGAACTCCGGAATATAGGAGGCCTTAGCTGTCATCTTGGAGTTAATGGATTTAACAGCCGAAGTCATAGCCCAAGCAATGGTTCTCTGATGGTGAGCAACGATCATTACGGACCTCAAGATCAAAATTCTATGAAAAGTCCAATGCAGTTGTCAGAAAGCCCTGGTAGATACCCCATGTCGGTTTTGTCAGAGGACAATCTTTCTAATGGTGGTTCAGATCTAGATGAAGATGTCGGAGATATGAACCAAGATGATCGTCCTGAGAGTCCCGATGCTCCTTTATCTCTTATAACAACCAAGAAGAACAACAACAATTCAGACGAGCTGCACCAAGAATCTCCAAAACCACCAGATATAATTAAGGTACATGATATCAAGCAAGAGCCAAAGGATTTGAGTAAAACCGAACAAATAATTTCCCCTCAACGATCTCCAGCTAAAAACAGTGACAGTTCCCATAACAACAACAGTAACAACAACAACAACGAGGAGGAGAACGGGGTCATTGAAGACCACGAGTCTGACGAGGAGTCTCCCCAGGAACGACTTTACCGACCATCGTCGTCTCCGCAGCTCGACAGATTACCGTTCCCGGTAATGCCCAACCACCCGATGTTCGGTCACGGGATCATGTACATGAGTCAGTACATGAGCGGGTTCCCTGGAGTGGGCCCGGTTCCAGGAGAGGGCGCCAGCGGCTTGAACCTGGCCCTCGCCGGGGCTTCGGACGAGCGTCGCAAAAGGAACCGCACTTTCATAGATCCAGTTTCCGAAGTGCCGGTCCTCGAGCAATGGTTTTCGATGAACACCCATCCGTCGCACAACTTAATACTCAAATACACAGAGGAACTGAACAGGATGCCGTACCGGCAGAAGTTTCCGCGTCTCGAGTCAAAGAACGTTCAGTTTTGGTTCAAGAACCGACGCGCCAAGTGCAAGAGGCTTAAGATGTCTCTGTATGAGCCGTCATCGCCGGGACATTACTCGCATCCGGGCCATCCTCACGCACTCGCCGAACGGAAAATGGTCTAA

Protein

MCLIRSCKTLPVHCVVEAVSSLEESNWRRRAIVETDSYVIIPAATAFHELVPAAMMRLGYPHELAASAKGSVVINNWKPLPFERISDGPLATVGEVLGELTTVATLRIQLLRPRPTPLQDIKDKLLRLLLVQSRPLLMSTGCPLDEITLAQICRGQDRTPGPHNFHEPSEDMRRKFESWWTAQVSPRPPPFSPRRYPSPGPKNRSPTLNSIPDHLHPALQTVQSQYPTQKTRMRTSFDPELELPKLQRWFAENQHPSRQQIQQYVRELNNLESRRGRKPLDVNNVVYWFKNARAAQKRAELRNIGGLSCHLGVNGFNSRSHSPSNGSLMVSNDHYGPQDQNSMKSPMQLSESPGRYPMSVLSEDNLSNGGSDLDEDVGDMNQDDRPESPDAPLSLITTKKNNNNSDELHQESPKPPDIIKVHDIKQEPKDLSKTEQIISPQRSPAKNSDSSHNNNSNNNNNEEENGVIEDHESDEESPQERLYRPSSSPQLDRLPFPVMPNHPMFGHGIMYMSQYMSGFPGVGPVPGEGASGLNLALAGASDERRKRNRTFIDPVSEVPVLEQWFSMNTHPSHNLILKYTEELNRMPYRQKFPRLESKNVQFWFKNRRAKCKRLKMSLYEPSSPGHYSHPGHPHALAERKMV

Uniprot

H9IZD0   A0A2A4JSA5   A0A0L7KSH8   A0A212FID2   A0A194PW09   A0A2H1VE97   + More
A0A194R1Q1   D6W897   N6TY36   U4TZ78   A0A1W4WSU4   A0A1W4X3R2   A0A067RDM5   A0A1B0CQV1   A0A336MJB2   Q16N43   A0A1S4EKG7   A0A1B6CZ59   A0A0T6B5J0   A0A2H8TCW6   A0A1Y1KXS2   A0A2P8Y3Z6   A0A2J7PEM7   A0A1B6JTT3   A0A1B6H787   A0A1B6C4J3   A0A1B0D528   A0A1L8DG31   A0A1W4VCP1  

Pubmed

19121390    26227816    22118469    26354079    18362917    19820115    + More
23537049    24845553    17510324    28004739    29403074   

EMBL

BABH01014285    NWSH01000701    PCG74709.1    JTDY01006421    KOB66026.1    AGBW02008398    + More
OWR53489.1    KQ459589    KPI97566.1    ODYU01002081    SOQ39137.1    KQ460870    KPJ11723.1    KQ971307    EFA10915.2    APGK01047204    APGK01047205    KB741077    ENN74225.1    KB631792    ERL86147.1    KK852532    KDR21872.1    AJWK01024075    AJWK01024076    AJWK01024077    UFQT01001008    SSX28447.1    CH477840    EAT35764.1    GEDC01018735    JAS18563.1    LJIG01009658    KRT82639.1    GFXV01000125    MBW11930.1    GEZM01074701    JAV64495.1    PYGN01000953    PSN38992.1    NEVH01026092    PNF14791.1    GECU01005086    JAT02621.1    GECU01037148    JAS70558.1    GEDC01028877    JAS08421.1    AJVK01025067    GFDF01008672    JAV05412.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    + More
UP000007266    UP000019118    UP000030742    UP000192223    UP000027135    UP000092461    UP000008820    UP000079169    UP000245037    UP000235965    UP000092462    UP000192221   

PRIDE

H9IZD0   

Pfam

PF00046   Homeodomain        + More
PF16534   ULD

Interpro

IPR038224   SATB_ULD_sf        + More
IPR009057   Homeobox-like_sf       
IPR039673   SATB1/SATB2       
IPR001356   Homeobox_dom       
IPR032392   ULD       

SUPFAM

SSF46689   SSF46689       

Gene 3D

3.10.20.710    

CDD

cd00086  homeodomain
cd11585  SATB1_N

ProteinModelPortal

H9IZD0   A0A2A4JSA5   A0A0L7KSH8   A0A212FID2   A0A194PW09   A0A2H1VE97   + More
A0A194R1Q1   D6W897   N6TY36   U4TZ78   A0A1W4WSU4   A0A1W4X3R2   A0A067RDM5   A0A1B0CQV1   A0A336MJB2   Q16N43   A0A1S4EKG7   A0A1B6CZ59   A0A0T6B5J0   A0A2H8TCW6   A0A1Y1KXS2   A0A2P8Y3Z6   A0A2J7PEM7   A0A1B6JTT3   A0A1B6H787   A0A1B6C4J3   A0A1B0D528   A0A1L8DG31   A0A1W4VCP1  

PDB

3TUO     E-value=1.11596e-12,     Score=179

KEGG

101738767    K19774 homeobox domain-containing protein | (RefSeq) uncharacterized LOC101738767

GO

GO:0005634   GO:0003677   GO:0006338   GO:0043565   GO:0008270   GO:0006470   GO:0008138   GO:0004725   GO:0006172   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR15116  

Subcellular location

Nucleus  

Length:

642

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.68125000000001

Exp number, first 60 AAs:

1.39132

Total prob of N-in:

0.06742

outside

1  -  642

 

 

Pi

307.431695

Theta

201.427562

Tajima's D

1.531251

CLR

0.015981

CSRT

0.7985600719964

Interpretation

Uncertain