Gene

KWMTBOMO02132

Pre Gene Modal

BGIBMGA003160

Annotation

Kruppel_homolog_1_[Bombyx_mori]

Location

Bomo_Chr4(-):12612063-12614862      View in EpiBrowser

Full name

Krueppel homolog 1      

Alternative Name

Krueppel homologous protein 1

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.248

CDS

ATGATAGGTGACGAGGAGCGAGTTCATCAGTGCGGCGAGTGTGGTTTGACATTGTCCACCCGCAGTGCGCTTACAGCACACGCACGATCCCATCGTTCTACTGCTGATGCACATCGCTGCGACGTGTGCCATAAGACTTTTGCTGTGCCTGCACGACTCGTGCGCCACTACCGAACCCATACTGGCGAGCGACCATTTGAATGTGAATATTGCCATAAAATGTTTAGTGTGAAAGAAAATTTGCAAGTACACCGTCGTATTCACACAAAGGAGAGGCCGTATCGGTGCAATGTTTGTGATGCGGCATTCGAGCATTCCGGAAAACTTCACAGACATGCTAGAATCCATACCGGCGAGAGACCGCACGCATGTCCACATTGTCATAAGACGTTCATACAATCTGGTCAACTGGTCATACATTTAAGGACCCACACAGGTGAGAAACCCTATCGTTGTCCTGCACCTGGATGCGGAAAGGGCTTCACCTGCTCTAAACAGCTTAAAGTACATTCTCGTACCCACACGGGAGAGCGACCCTATACTTGTGAAATTTGTCTCAGGGACTTTGGTTATAATCATGTTCTCAAATTACATCGTTTTCAACATTTTGGCGAGCGCTGTTATCGTTGCACTGTATGCGACGGTACATTTAATACAAAAAAACAAATGGAGGCCCATATTTACAAAGAACATGGCGCGGAAGCCCCCCGCACTGCACCTTTACAGAGTACAACACCAATGGCTGCCGATGGTAAAGTGATGTGTGACTTGGTTGAAGCTGCTTTGCAACAGCTTCCTCCTACTCCACCTAGTTCACCGCCATCACCTAGATGTCCCAGTATTTCAGTGGTTCCAATGATGCCATCGTCAACTCAAGTCAACGATACGCCGACATCATTAGCTGCGGTCCCCGTACATTACATTTCGTTGCCGTCTGATTTACCGCCTAGAAAACGTAAATTTATTCCTCACATAAACGAAGAAATTACTCCGGCTGTGCGTCATACTTCTGTTATACAATTTGCTCCGCCAGCTACAGAATCATAG

Protein

MIGDEERVHQCGECGLTLSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFEHSGKLHRHARIHTGERPHACPHCHKTFIQSGQLVIHLRTHTGEKPYRCPAPGCGKGFTCSKQLKVHSRTHTGERPYTCEICLRDFGYNHVLKLHRFQHFGERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAPRTAPLQSTTPMAADGKVMCDLVEAALQQLPPTPPSSPPSPRCPSISVVPMMPSSTQVNDTPTSLAAVPVHYISLPSDLPPRKRKFIPHINEEITPAVRHTSVIQFAPPATES

Description

Plays a general role in the hierarchies of gene expression leading to metamorphosis.

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Alternative splicing   Complete proteome   Developmental protein   DNA-binding   Metal-binding   Reference proteome   Repeat   Zinc   Zinc-finger  

Feature

chain  Krueppel homolog 1
splice variant  In isoform Alpha.

Uniprot

D4Q9I0   H9J0X3   G5ELN7   A0A2H1X0F9   G1FVK7   A0A2N9QQ78   + More
A0A2A4IX50   A0A0G2SKS0   A0A0L7LHK3   S4NXQ5   A0A194QSA3   A0A1Z2WUZ3   A0A2W1BX39   A0A212FA66   A0A1J1I8F4   A0A2K9P5B7   A0A0K8UB47   A0A0K8UEX2   A0A0K8VXI0   A0A336LXV9   A0A3G2KQQ7   A0A1S4F1I8   A0A1L8DIY1   Q17IC7   A0A182G9G0   A0A1L8DIX2   B0X1K7   W8CCM7   P08155   B4I1R7   B4Q4I9   P08155-2   A0A0A1XGE2   B4P0P1   A0A0J9QXK1   A0A3B0KI82   B3N5F8   A0A1Q3FPJ8   A0A1Q3FPL6   A0A0R1DS97   Q7Q1R4   Q29PP4   A0A0Q5WB59   B4G6I1   A0A182SQN2   A0A0J9TGV3   R4IKD5   A0A1B0A848   A0A0Q5WB25   A0A1A9V173   A0A1A9X8X7   A0A1B0BFI6   A0A182L675   A0A182RGR4   A0A182USY8   A0A0L7QM13   D0EWS5  

Pubmed

22753472    19121390    22285394    26227816    23622113    26354079    + More
28756777    22118469    17510324    26483478    24495485    10772791    10731132    12537572    12537569    3096579    17994087    22936249    25830018    17550304    12364791    15632085    23499946    20966253    20429952   

EMBL

AB360766    BAJ05087.1    BABH01010438    AB642242    BAL04727.1    ODYU01012400    + More
SOQ58686.1    JN258329    AEL97587.1    KY399992    ASA47798.1    NWSH01005404    PCG64239.1    KJ825896    AJW29007.1    JTDY01001039    KOB75048.1    GAIX01012062    JAA80498.1    KQ461196    KPJ06421.1    KY400007    ASB17947.1    KZ149933    PZC77246.1    AGBW02009514    OWR50627.1    CVRI01000044    CRK96499.1    KY646174    AUO38589.1    GDHF01028516    GDHF01002125    JAI23798.1    JAI50189.1    GDHF01027176    JAI25138.1    GDHF01009089    GDHF01006677    JAI43225.1    JAI45637.1    UFQT01000271    SSX22640.1    MG763073    AYN61559.1    GFDF01007682    JAV06402.1    CH477240    EAT46451.1    JXUM01000311    JXUM01000312    KQ560104    KXJ84537.1    GFDF01007681    JAV06403.1    DS232262    EDS38735.1    GAMC01003426    GAMC01003424    JAC03130.1    AJ005440    AJ005441    AE014134    AY051816    M14940    CH480820    EDW54474.1    CM000361    CM002910    EDX03916.1    KMY88463.1    GBXI01017187    GBXI01016044    GBXI01005568    GBXI01003838    JAC97104.1    JAC98247.1    JAD08724.1    JAD10454.1    CM000157    EDW87936.1    KMY88464.1    OUUW01000010    SPP86119.1    CH954177    EDV59037.1    GFDL01005649    JAV29396.1    GFDL01005617    JAV29428.1    KRJ97494.1    AAAB01008980    EAA13888.4    CH379058    EAL34248.3    KQS70604.1    CH479180    EDW28206.1    KMY88465.1    CCAG010006621    JX291126    AFQ01095.1    KQS70605.1    JXJN01013486    KQ414902    KOC59657.1    GQ903677    ACX50259.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000183832    + More
UP000008820    UP000069940    UP000249989    UP000002320    UP000000803    UP000001292    UP000000304    UP000002282    UP000268350    UP000008711    UP000007062    UP000001819    UP000008744    UP000075901    UP000092444    UP000092445    UP000078200    UP000092443    UP000092460    UP000075882    UP000075900    UP000075903    UP000053825   

PRIDE

D4Q9I0    H9J0X3    G5ELN7    P08155   

Pfam

PF00096   zf-C2H2        + More
PF12171   zf-C2H2_jaz

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR022755   Znf_C2H2_jaz       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

D4Q9I0   H9J0X3   G5ELN7   A0A2H1X0F9   G1FVK7   A0A2N9QQ78   + More
A0A2A4IX50   A0A0G2SKS0   A0A0L7LHK3   S4NXQ5   A0A194QSA3   A0A1Z2WUZ3   A0A2W1BX39   A0A212FA66   A0A1J1I8F4   A0A2K9P5B7   A0A0K8UB47   A0A0K8UEX2   A0A0K8VXI0   A0A336LXV9   A0A3G2KQQ7   A0A1S4F1I8   A0A1L8DIY1   Q17IC7   A0A182G9G0   A0A1L8DIX2   B0X1K7   W8CCM7   P08155   B4I1R7   B4Q4I9   P08155-2   A0A0A1XGE2   B4P0P1   A0A0J9QXK1   A0A3B0KI82   B3N5F8   A0A1Q3FPJ8   A0A1Q3FPL6   A0A0R1DS97   Q7Q1R4   Q29PP4   A0A0Q5WB59   B4G6I1   A0A182SQN2   A0A0J9TGV3   R4IKD5   A0A1B0A848   A0A0Q5WB25   A0A1A9V173   A0A1A9X8X7   A0A1B0BFI6   A0A182L675   A0A182RGR4   A0A182USY8   A0A0L7QM13   D0EWS5  

PDB

2I13     E-value=2.73948e-34,     Score=363

KEGG

100415910    no KO assigned | (RefSeq) Kr-h1, BmKr-h1; Kruppel homolog 1

GO

GO:0003676   GO:0046872   GO:0035075   GO:0007552   GO:0010977   GO:0045316   GO:0003700   GO:0003677   GO:0006355   GO:0005634   GO:0005674   GO:0006366   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00055

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01895

outside

1  -  348

 

 

Pi

178.508427

Theta

208.400266

Tajima's D

-0.457975

CLR

120.992788

CSRT

0.250937453127344

Interpretation

Uncertain