Gene

KWMTBOMO02002

Pre Gene Modal

BGIBMGA013554

Annotation

PREDICTED:_neural_retina-specific_leucine_zipper_protein-like_[Amyelois_transitella]

Location

Bomo_Chr4(-):9764992-9766292      View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear   Reliability : 4.068

CDS

ATGCAAACCCTTCCATTGCAGCCGCATCGCGAAGCTGATGACGATCAGCTCGCTGATGAATACGTACAGAACTTTGAGCTGGACCATCTCGAAGATCACAACCTGGTGAAACGTGAGCCGCTTCGTGGCGGAGCGTACGAATTGATACAAACGCCGCCGGCATGTGCTCGTGCTCTCCGACCCTGGCCTGATGCGGGACCGTATCCACAACCGCATGTAGCTATCGCTGTTGATCCCAGTACACCTCCTGAAACCCCTCCGGCGACGATTGGCCGTAGTCCATGTCGTGCCGCCCTAGTTGACGATGTACTCTGGCTACCACATATGAGAGAGCCTCTTGACATGCGTACAGTGCCGTGTGGAAGTTTTGAAGAATGGGACAGGCGCGAGTGGAGAGAACAAGATCATTACGGACAACAAGTCGCACTGCGCCCAGCTAGTTCTTGTTCGGCAATGTCTCCTCGCAACGGACCGCATCCATCATATCAGCCATCCTCTTGCGGGGACGATTTGATTAGTGACGATCTACTGATGACCTTAAGCGTGCGTGAGCTGAATAAGAGATTGCACGGTTTCCCACGAGAAGATGTAACGCGCCTAAAACAGAAAAGACGCACTCTTAAAAACCGCGGGTACGCGCAGAACTGTCGCAGTAAGAGATTGCAGCAGCGGCAAGAGTTGGAAATGACTAATAGAACGCTACAAGATGAGCTCCACGTGCTGCAGCTGCAGGTTGCCCGTGTGACGCACGAACGGGACGTGTTGAAGCAGCGGCTAGCGTTGATGGGACGTGAGCATGCCGTGCCGCAGCACGCACCGCCGACGCCGCACTCTTCACCTGAGTTCTTCTCGGAGCTGTGA

Protein

MQTLPLQPHREADDDQLADEYVQNFELDHLEDHNLVKREPLRGGAYELIQTPPACARALRPWPDAGPYPQPHVAIAVDPSTPPETPPATIGRSPCRAALVDDVLWLPHMREPLDMRTVPCGSFEEWDRREWREQDHYGQQVALRPASSCSAMSPRNGPHPSYQPSSCGDDLISDDLLMTLSVRELNKRLHGFPREDVTRLKQKRRTLKNRGYAQNCRSKRLQQRQELEMTNRTLQDELHVLQLQVARVTHERDVLKQRLALMGREHAVPQHAPPTPHSSPEFFSEL

Similarity

Belongs to the bZIP family.

Uniprot

H9JVJ1   A0A2A4K0A7   A0A2H1WRM4   A0A212ET27   A0A0N1IBR4   A0A194PKD5   + More
A0A194RGP6   S4NTD5   A0A0L7L5E8   A0A139WH81   A0A1S4FHH5   Q171C4   N6T328   A0A336K2S7   A0A182GU35   B0WGB9   A0A1Y1LMT3   A0A1B6KIB7   T1IWW4   A0A1B6JWZ3  

Pubmed

19121390    22118469    26354079    23622113    26227816    18362917    + More
19820115    17510324    23537049    26483478    28004739   

EMBL

BABH01038994    NWSH01000331    PCG77334.1    ODYU01010545    SOQ55729.1    AGBW02012699    + More
OWR44601.1    LADI01008938    KPJ20697.1    KQ459601    KPI93787.1    KQ460398    KPJ15101.1    GAIX01012241    JAA80319.1    JTDY01002792    KOB70718.1    KQ971343    KYB27323.1    CH477459    EAT40602.1    APGK01054270    KB741248    KB630951    KB630952    KB632305    ENN71958.1    ERL83959.1    ERL83960.1    ERL91843.1    UFQS01000030    UFQT01000030    SSW97808.1    SSX18194.1    JXUM01018545    KQ560515    KXJ82036.1    DS231924    EDS26857.1    GEZM01055871    JAV72906.1    GEBQ01028794    JAT11183.1    JH431632    GECU01004007    JAT03700.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000007266    UP000008820    UP000019118    UP000030742    UP000069940    UP000249989    UP000002320   

PRIDE

H9JVJ1   

Pfam

PF03131   bZIP_Maf        + More
PF01212   Beta_elim_lyase

Interpro

IPR024874   Transciption_factor_Maf_fam        + More
IPR004827   bZIP       
IPR004826   bZIP_Maf       
IPR008917   TF_DNA-bd_sf       
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR001597   ArAA_b-elim_lyase/Thr_aldolase       

SUPFAM

SSF47454   SSF47454        + More
SSF53383   SSF53383       

Gene 3D

3.40.640.10    

ProteinModelPortal

H9JVJ1   A0A2A4K0A7   A0A2H1WRM4   A0A212ET27   A0A0N1IBR4   A0A194PKD5   + More
A0A194RGP6   S4NTD5   A0A0L7L5E8   A0A139WH81   A0A1S4FHH5   Q171C4   N6T328   A0A336K2S7   A0A182GU35   B0WGB9   A0A1Y1LMT3   A0A1B6KIB7   T1IWW4   A0A1B6JWZ3  

PDB

4EOT     E-value=2.79675e-21,     Score=250

KEGG

101742257    no KO assigned | (RefSeq) neural retina-specific leucine zipper protein

GO

GO:0003700   GO:0003677   GO:0005634   GO:0016829   GO:0000978   GO:0043565   GO:0006520   GO:0006355   GO:0005737   GO:0016876   GO:0043039   GO:0004651  

PANTHER

PTHR10129  

Subcellular location

Nucleus  

Length:

286

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01605

outside

1  -  286

 

 

Pi

338.299103

Theta

236.878814

Tajima's D

1.391523

CLR

0

CSRT

0.768011599420029

Interpretation

Uncertain