SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01749
Annotation
PREDICTED:_uncharacterized_protein_LOC101737731_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 1.631
 

Sequence

CDS
ATGCCAGCGTGTGTGGTGAAGTGGTGCAGGAGTCATTCAAGGCTAAATTGCCCAGGGATCACTTTTCACTATTTTCCTGCTGATGCAATTCGGCAAAAGAAGTGGATAGCTGCAGTGAAGTTGGAAAGACAGGAATATGACTGGATGCCTGTGAAAACTAGCAGAGTATGCTCTATTCATTTTGATAAAAAAGATTTTTACAAATCATTAAAAGGTTATACAATGTTACACAAAACTGCAGTACCAGTTTGTACAATGATTCGTTTTGAAGAAACGCCAACATCTTCAAGGAATAGTACCGAAAATGAAAACAACAATAATGAAAGATTACAATCGGTTGATGAAAATTCACTTTTTGCAAATTTTAAAGTGGGTGATTTACCTGAGCAGTTCACTAAAACAAATACTGCAGAACCTCAAGCGCATAAGGCACAAAAACTTAAATTGGAGAATAAAATCGTCACTGAATATAACGAAGGCGCTGCAGAGGAATCAAGAAAAAAAAATTTTGAAAATAATCTTATATTGAATCTGAACTGA
Protein
MPACVVKWCRSHSRLNCPGITFHYFPADAIRQKKWIAAVKLERQEYDWMPVKTSRVCSIHFDKKDFYKSLKGYTMLHKTAVPVCTMIRFEETPTSSRNSTENENNNNERLQSVDENSLFANFKVGDLPEQFTKTNTAEPQAHKAQKLKLENKIVTEYNEGAAEESRKKNFENNLILNLN

Summary

Uniprot
ProteinModelPortal
PDB
2D8R     E-value=0.00780182,     Score=88

Ontologies

Topology

Length:
179
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00822000000000001
Exp number, first 60 AAs:
0.00553
Total prob of N-in:
0.26761
outside
1  -  179
 
 

Population Genetic Test Statistics

Pi
458.032822
Theta
184.959143
Tajima's D
4.799771
CLR
0.911511
CSRT
0.999950002499875
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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