Gene

KWMTBOMO01362

Pre Gene Modal

BGIBMGA008897

Annotation

PREDICTED:_zinc_finger_protein_426-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr3(+):9104977-9119087      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.066

CDS

ATGGAAGACAGCAATATAAAATGTCCTGTTTGTTGCGATAGGACTTTTGATTCTAAGAGTACACTGCTAGAACATTTGATTAATATTTTGAAAAACTTATACTGTCCCATTTGTGATAATAAACAAGCGACACTAGTACATCTAGTTGATCATCTAACCCAAAATGATTGTCAAAAAGAAAAGGAAGAATTAAAAGAATTTTCGGTCATACTACAAGATCAAACTGATAATATTAAAAACGAACATTTCGAAGTATTATCAAGTGAAACTGTTGACCAATCTGCTAAAGGTAACACAACACCAACACATGCATTAGATGCTCAAATAGATGGGAATGATGTTGGTAAGATGTATGTTGAATTAATTGGTAAGGAGTTGATGAAACCTTGCCTCCAAACTCAGGAGTTGAAATTAGTAAAAGAAGATGGAGAAAGTCGATACATGATTATAACTCATCCAACCAACCGTAACATAGAAAACACTATTGTAACTAAGCAGAACAATGATGGAACTATTTCTTTAACAGTTAAAGATGTAGTGGGAGAATCAGACAACTTAACTGCATTGAGAGTAGAAGAAAAAGAATTGAATCAAGAAGAGAATATATATAGCTGCAATACTTGTGGAGTATCATTCTCATCTGTACTAGAACACATACAAAACTATCATAATGATCAGGAGGTTGTAGTTGAAGAACCAATAGATGAAGTAGAAAATAAATTAACATATGACCCAATGCAAACTGAAGATGAAAATGGGCAAGACAAACAAATATCACGAAGGGTGATCACAGAAACTGGAGATATTCTTGAAGCACCATTATTGACAAATTCAAATCCGTTAATGTCTGAAGAACCTATAGAAGATCCATTAGCAGATAGCAGTGAACTATCGTCGCTGTTAAATAACCAGTCGGAGTTTACGTCAAAAATTGTATTGATTGAAGATCTTGAAAATACAATGGAAGAAGAAAAGCAGGATAAGCCCCTTGCTTGCCATAAAGTGGTAGTGAAAGCTATAAAGCTACAAAATGGAGATTTGGCCAAGATGTACTATTGTAAGTCTTGCATGATATATGTGCCAAATATCAATGACTTCAAATCGAAACCATGCAAGATCTTGAAGTACGCATGTCCGCATTGTTCAGCCGTATATGAGAATTCGAAATCACTACATGCACATATGAAAATTCATAAACCAAAACAAGATAATAATGCAGAAGCACCGTTGACATATGAATGTGAACTATGTTGCACGGTGTTTTCAACTAATAAATCGTTGAAACTACACAAACGGATGCACGATCCACAAAAAGCCCGCCCCATTGAGCTTCCCGTGAACAGCAAGGACGGTACCGAGTCGTCAGGCAAACGGTTCTTGTGCCGCGTGTGCAATAAACTAATACCAATCGAATATTTGACCGTCCATCAGAATTCTCATAAAACGAACAACATGTTCAACTGCAGTATCTGCAACAAGAAGTTCAACTCAAACGAGTATCTAGAGATGCATATGAACGTACATAATTTAGAAAAGGTAACGGTAAACAAACAGGACAAATCGCTTCCGTACAATTGTCTTTATTGCCACAGAAGGTTCGCCAGACCGCACGAGAAGGTCAAACATGAGAGGATACACACAGGCGAGAAGCCCCACTCATGTGAGATATGCGGGAAATCTTTCAGAGTCTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGAGCTAGACCCTACGAATGTCCGCATTGTGGGAAAAGGTTTAAAGCGCACAGCGTGTACAACCACCATTTGCTGACCCACTCCGACGTCAGAGCCTACAAGTGTCCTTACTGTCCTAAAGCGTTCAAGACATCGGTGCAACTCGCCGGACATAAAAATTCTCACACGAAGCCGTTTTCGTGTCAGCACTGTAACAGGCCCTTCGCATCGCTGTACGCCGTCCGAGTGCACACGGAGACGCACTTGCGCCAGAACAACTTGAAGTTCTCGTGCTCGTTGTGCGGCGCCAGTTACGCGCGAGCCTTCGCCCTCAACGACCACATGAAGCAAGCGCACAAGGCGGTCGTCAACCCCACCGAGGCCTTGACGGTCAATGACGATAAGTGGGTCATCATAAGCGACACAGAGGACATACAAGATCTGAACAAGGATCTGTCACAAGACGTATCAGACCTCGGAATCGGCGCAGACACATTAATAATTCCTTAA

Protein

MEDSNIKCPVCCDRTFDSKSTLLEHLINILKNLYCPICDNKQATLVHLVDHLTQNDCQKEKEELKEFSVILQDQTDNIKNEHFEVLSSETVDQSAKGNTTPTHALDAQIDGNDVGKMYVELIGKELMKPCLQTQELKLVKEDGESRYMIITHPTNRNIENTIVTKQNNDGTISLTVKDVVGESDNLTALRVEEKELNQEENIYSCNTCGVSFSSVLEHIQNYHNDQEVVVEEPIDEVENKLTYDPMQTEDENGQDKQISRRVITETGDILEAPLLTNSNPLMSEEPIEDPLADSSELSSLLNNQSEFTSKIVLIEDLENTMEEEKQDKPLACHKVVVKAIKLQNGDLAKMYYCKSCMIYVPNINDFKSKPCKILKYACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMHDPQKARPIELPVNSKDGTESSGKRFLCRVCNKLIPIEYLTVHQNSHKTNNMFNCSICNKKFNSNEYLEMHMNVHNLEKVTVNKQDKSLPYNCLYCHRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYECPHCGKRFKAHSVYNHHLLTHSDVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHLRQNNLKFSCSLCGASYARAFALNDHMKQAHKAVVNPTEALTVNDDKWVIISDTEDIQDLNKDLSQDVSDLGIGADTLIIP

Uniprot

H9JHA0   A0A2H1VC55   A0A212EV17   A0A2A4K9U8   A0A194RMS6   A0A194PVD0   + More
A0A310SQN2   A0A151I3H2   A0A151WVJ5   A0A151ISB6   A0A0N1IU23   A0A2A3E7T4   A0A088AMC8   A0A1W4WIS1   A0A026X0J6   A0A1Y1KSI2   A0A151K193   A0A3L8DUH5   A0A195D791   F4X5S1   A0A232EWY0   A0A0L7RCV4  

Pubmed

19121390    22118469    26354079    24508170    28004739    30249741    + More
21719571    28648823   

EMBL

BABH01012611    BABH01012612    ODYU01001751    SOQ38381.1    AGBW02012259    OWR45326.1    + More
NWSH01000002    PCG81065.1    KQ459989    KPJ18724.1    KQ459591    KPI96948.1    KQ761619    OAD57323.1    KQ976507    KYM82791.1    KQ982701    KYQ51904.1    KQ981090    KYN09561.1    KQ435711    KOX79532.1    KZ288340    PBC27765.1    KK107046    EZA61797.1    GEZM01075013    JAV64343.1    KQ981175    KYN45291.1    QOIP01000004    RLU23823.1    KQ976750    KYN08728.1    GL888742    EGI58161.1    NNAY01001812    OXU22850.1    KQ414615    KOC68586.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268    UP000078540    + More
UP000075809    UP000078492    UP000053105    UP000242457    UP000005203    UP000192223    UP000053097    UP000078541    UP000279307    UP000078542    UP000007755    UP000215335    UP000053825   

PRIDE

H9JHA0   

Pfam

PF00096   zf-C2H2        + More
PF08514   STAG

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR016024   ARM-type_fold       
IPR039662   Cohesin_Scc3/SA       
IPR020839   SCD       
IPR013721   STAG       

SUPFAM

SSF57667   SSF57667        + More
SSF48371   SSF48371       

ProteinModelPortal

H9JHA0   A0A2H1VC55   A0A212EV17   A0A2A4K9U8   A0A194RMS6   A0A194PVD0   + More
A0A310SQN2   A0A151I3H2   A0A151WVJ5   A0A151ISB6   A0A0N1IU23   A0A2A3E7T4   A0A088AMC8   A0A1W4WIS1   A0A026X0J6   A0A1Y1KSI2   A0A151K193   A0A3L8DUH5   A0A195D791   F4X5S1   A0A232EWY0   A0A0L7RCV4  

PDB

5WJQ     E-value=4.03553e-33,     Score=356

KEGG

101746212    no KO assigned | (RefSeq) zinc finger protein 426-like

GO

GO:0003676   GO:0046872   GO:0005524   GO:0008026   GO:0016820   GO:0016042   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

PANTHER

PTHR11199  

Length:

737

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00076

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00016

outside

1  -  737

 

 

Pi

264.379617

Theta

177.098653

Tajima's D

1.041541

CLR

0.054517

CSRT

0.673616319184041

Interpretation

Uncertain