Gene

KWMTBOMO01318

Pre Gene Modal

BGIBMGA009009

Annotation

PREDICTED:_zinc_finger_protein_182-like_isoform_X11_[Bombyx_mori]

Location

Bomo_Chr3(-):7956479-7970324      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.474

CDS

ATGGATGACGATGGTGTAGAAATGGACATGGACAGTCGACAGTGTTCTCAGGGAATGGGACTGGATATGGGATCGGTACAAACAAAATTGGAAGTGTCAAACGGAAGCGTTCAATCATCGCCACGGTCCAAGCCTCAAGCATGCAAAGTTTGCGGCAAAGTATTATCATCAGCGTCATCATATTACGTCCACATGAAACTTCATTCCGGGAACAAACCCTTCCAATGCACGGTATGCGAGGCTGCGTTCTGCCGGAAGCCATATTTAGAAGTGCACATGAGAACACACACCGGTGAGCGTCCGTTCCAATGTGACTTATGTTTGAAACGATTCACACAAAAATCCAGCTTAAATACGCACAAACGCGTCCACACAGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTCCAGGGAAGACCGTTCCAGTGCCTGTCGTGTCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATTCACACGCGCACCCATACTGGCGAGCGGCCCTATCAGTGCGACATCTGCCTGAAACGCTTCACGCAGAAGTCGAGTCTCAACATACACAAGCGGACGCACTCAGTGCAGGGCCGGCCTTTCCAGTGCTTGCAGTGCCCTGCCGCCTTCACCTGCAAGCAGTACCTCGAGATACACAATCGCACGCACACCGGCGAACGGCCTTACCAATGCGACGTCTGCCTCAAGCGGTTCGCGCAAAAGTCAACACTCAACATACACAAACGAACGCACACAGTGCAAGGTCGTCCGTATCAATGCATGGAGTGCCCGGCGGCGTTCACGTGCAAGCCGTACCTGGAGATACACACGCGCACGCACACGGGCGAACGTCCGTTTGAATGCGACGTCTGTTACAAACGCTTCACACAGAAATCGACGCTCAACATACACAAGCGCATTCATACCGGTGAACGTCCTTACGCGTGTGATATTTGCCAGAAACGGTTCGCCGTGAAGAGTTATGTAACGGCTCATAGGTGGTCCCACGTGGCGGACAAGCCTCTGAACTGCGACCGATGCTCGATGACGTTCACGTCCAAGTCCCAGTTCGCACTCCACATCCGCACGCACGCAGCCGGCTCGTGCTACGAGTGCAGCGTCTGCGGACGGAGCTTCGTCAGAGACAGCTATCTAATACGCCATCACAATCGCGTACACCGCGACAACCACAGCAACATGTCGGCGAACAGCATTGGCATTAACAGCGTCGCCACGAACACAAACAACTCGAACAACAGCAACTACGACTCGCCCGGCGTTTGTGACTTGAGCTTTGTTCCGATGGTGAACCGATACATGACGTCACAGGGAACTCAAGTGTCCATGCAAGACACCCAAAGCAAGATGTCCGCAATGTCCCCGCAATCCATCGCCTCTATATCGTCGCCCCCTCCCTCGCATACGCCCACGCCGCAGCCGCAGATGTCCGGCCAGCTGCATCTAGCAGACTGA

Protein

MDDDGVEMDMDSRQCSQGMGLDMGSVQTKLEVSNGSVQSSPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCEAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANSIGINSVATNTNNSNNSNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASISSPPPSHTPTPQPQMSGQLHLAD

Uniprot

A0A212EQ59   A0A2A4JX32   A0A1E1W5X4   A0A194RRS7   A0A194PUI7   A0A2A4JY70   + More
A0A1J1IDG0   A0A1E1WIE5   A0A1E1WDE5   A0A0L7L749   A0A2U3VNZ5   H2YQC6   G1M7B2   R7V818   J9JMS6   A0A1S3GVD3   A0A087XJR5   H2YQC4   V4AAN6   A0A383ZZH6   A0A2Y9G818   A0A1S3GTD6   A0A1S3F6G5   A0A1S3F446   A0A2Y9MEX3   M3YPR8   A0A287B3E6   J9K4V2   A0A0L8HKR3   J9JPB3   K9IT96   H2PVH4   A0A0L8HHH4   A0A2U3ZD98   G1M2F0   A0A2J8WIB7   A2ARX0   G3SUF5   A0A340WQ41   F1PN77   F1RW59   A0A287AKC8   S7PIK6   A0A1D5QTK2   A0A2K6RDN6   A0A1S3GUK6   D2H7P8   G1NTE5   A0A1S3GXQ0   A0A337SNV9   X1XNT2   A0A2K6L0F9   A0A2K5WEA2   F7D328   A0A384C652   A0A0L8HKZ5   A0A2K6E2S4   G7Q2M0   A0A341CMI0   G1TZ87   A0A341CME4   G7NR63   B4DRM0   A0A2K6RDH4   F6W9Y4   A0A384C7D7   A0A2Y9MBG6   A0A2U3XL71   A0A1U7TMQ7   A0A3L7H3C3   A0A2Y9MCQ6   A0A2K5XRB6   A0A2Y9S5U0   X1WP87   A0A2R8MFX1   A0A2K5XRB0   A0A2K5LV29   A0A2K5QKI4   A0A2U4C0M3   A0A2Y9FWZ1   A0A2U4C0M9   A0A2K5LV40   A0A2K5WE73   H9ZDA8  

EC Number

2.1.1.-

Pubmed

22118469    26354079    26227816    20010809    23254933    19468303    + More
16341006    17431167    25362486    21993624    17975172    22002653    19892987    29704459    25319552   

EMBL

AGBW02013301    OWR43633.1    NWSH01000444    PCG76369.1    GDQN01008681    JAT82373.1    + More
KQ459989    KPJ18761.1    KQ459591    KPI96987.1    PCG76370.1    CVRI01000047    CRK97596.1    GDQN01004326    JAT86728.1    GDQN01006068    JAT84986.1    JTDY01002486    KOB71322.1    ACTA01178402    AMQN01038589    KB294404    ELU14642.1    ABLF02038601    AYCK01022746    AYCK01022747    KB202444    ESO90341.1    AEYP01038439    AEYP01038440    AEYP01038441    AEYP01038442    AEYP01038443    AEMK02000113    ABLF02014787    KQ417917    KOF89831.1    ABLF02011791    ABLF02011792    GABZ01001237    JAA52288.1    ABGA01177782    ABGA01177783    ABGA01177784    NDHI03003388    PNJ69531.1    KQ418204    KOF88225.1    ACTA01042159    PNJ69530.1    AL845494    AAEX03026331    KE163040    EPQ10623.1    JSUE03045490    JSUE03045491    GL192563    EFB29252.1    AAPE02033791    AANG04002273    ABLF02003804    ABLF02003805    ABLF02003807    ABLF02004643    ABLF02004644    AQIA01084452    AQIA01084453    KOF89799.1    CM001296    EHH60849.1    AAGW02040280    CM001273    EHH30690.1    AK299325    BAG61332.1    RAZU01000306    RLQ60417.1    ABLF02029797    JU477120    AFH33924.1   

Proteomes

UP000007151    UP000218220    UP000053240    UP000053268    UP000183832    UP000037510    + More
UP000245340    UP000007875    UP000008912    UP000014760    UP000007819    UP000081671    UP000028760    UP000030746    UP000261681    UP000248481    UP000248483    UP000000715    UP000008227    UP000053454    UP000001595    UP000000589    UP000007646    UP000265300    UP000002254    UP000006718    UP000233200    UP000001074    UP000011712    UP000233180    UP000233100    UP000261680    UP000233120    UP000009130    UP000252040    UP000001811    UP000002281    UP000245341    UP000189704    UP000273346    UP000233140    UP000008225    UP000233060    UP000233040    UP000245320    UP000248480   

PRIDE

A2ARX0    F1RW59    B4DRM0   

Pfam

PF00096   zf-C2H2        + More
PF01352   KRAB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR017125   Znf_PRDM5-like       
IPR017114   YY-1-like       
IPR011017   TRASH_dom       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

A0A212EQ59   A0A2A4JX32   A0A1E1W5X4   A0A194RRS7   A0A194PUI7   A0A2A4JY70   + More
A0A1J1IDG0   A0A1E1WIE5   A0A1E1WDE5   A0A0L7L749   A0A2U3VNZ5   H2YQC6   G1M7B2   R7V818   J9JMS6   A0A1S3GVD3   A0A087XJR5   H2YQC4   V4AAN6   A0A383ZZH6   A0A2Y9G818   A0A1S3GTD6   A0A1S3F6G5   A0A1S3F446   A0A2Y9MEX3   M3YPR8   A0A287B3E6   J9K4V2   A0A0L8HKR3   J9JPB3   K9IT96   H2PVH4   A0A0L8HHH4   A0A2U3ZD98   G1M2F0   A0A2J8WIB7   A2ARX0   G3SUF5   A0A340WQ41   F1PN77   F1RW59   A0A287AKC8   S7PIK6   A0A1D5QTK2   A0A2K6RDN6   A0A1S3GUK6   D2H7P8   G1NTE5   A0A1S3GXQ0   A0A337SNV9   X1XNT2   A0A2K6L0F9   A0A2K5WEA2   F7D328   A0A384C652   A0A0L8HKZ5   A0A2K6E2S4   G7Q2M0   A0A341CMI0   G1TZ87   A0A341CME4   G7NR63   B4DRM0   A0A2K6RDH4   F6W9Y4   A0A384C7D7   A0A2Y9MBG6   A0A2U3XL71   A0A1U7TMQ7   A0A3L7H3C3   A0A2Y9MCQ6   A0A2K5XRB6   A0A2Y9S5U0   X1WP87   A0A2R8MFX1   A0A2K5XRB0   A0A2K5LV29   A0A2K5QKI4   A0A2U4C0M3   A0A2Y9FWZ1   A0A2U4C0M9   A0A2K5LV40   A0A2K5WE73   H9ZDA8  

PDB

5V3M     E-value=4.30675e-53,     Score=527

KEGG

101737083    K09228 KRAB domain-containing zinc finger protein | (RefSeq) zinc finger protein 2 homolog

GO

GO:0003676   GO:0000976   GO:0005634   GO:0046872   GO:0006355   GO:0015991   GO:0046961   GO:0016820   GO:0016042   GO:0006334   GO:0003779   GO:0016021  

Length:

505

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00085

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.00182

outside

1  -  505

 

 

Pi

221.944671

Theta

171.727154

Tajima's D

0.941008

CLR

0.396995

CSRT

0.645217739113044

Interpretation

Uncertain