SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01121
Pre Gene Modal
BGIBMGA007440
Annotation
PREDICTED:_zinc_finger_protein_567-like_isoform_X4_[Bombyx_mori]
Location
Bomo_Chr3(+):2563822-2579460      View in EpiBrowser
Transcription factor
zf-C2H2
Location in the cell
Nuclear   Reliability : 4.254
 

Sequence

CDS
ATGAAGAAGAAAGACCCGAATTCGAACATAACATTCCATGCGTTCCCAACAAATTCATTAATGAAGGCTAAATGGGTGAAAGCGATTGGCCGTTCTAATTGGGATCCACCGGCCTATGCACGTATCTGCAGTATACACTTTGATCGCGACTATGTCAATTACGAGAACTGTAGAACTAGAATCAAGGATGATGCTATACCTGTTCTAAATTTACCTTTGAGCTCTAATTTTGATGCTTCTGAGGTAAAAGTCTGTAGAATATGTCTGGCAAATGATGTTAAAATGTACAGTACTCAAGAAGGAAGATTAAAGTCTTATATGGAACAAATATTAGTGTTAAGGGAAAAATTACAAACAGATGGACTTCCACAGTTTGTGTGTTACATGTGTGCAGCTGAGGTTGGCAAGTGTTGCAAACTTATTGAGAAGAGTGTTGTAGCTCAGGCAACATTGCTAGATGTATTTGCGCGAAATGGAATGGTAACTAAAGATCTAATACGAAGAATCAATAGAAAACAGTTAAACTTGTGTTCATCATTATCTACAACCAATCAAACACATTATTATGTAGAACACGGTTCTAAAAACCAACAAAATAGATCATCAATGAAATTTGATTTTGAATGCAAAAATGGAGAAATAAATGTAAAATTAGAAAATCATTTGGATGCTATGGTTGAAAATTCAAAGAATTATGATACATCTGATATTATTGATGGAGGGATGAGATACAATGATAGAGATAATATTTCGGTTGGATCTGATTGTAGTGACGATAAATCATTAAGTTTATTGAAGAAAACTAAGAGTCTAAAGAGTCGTAATAAAGCCGAGTGTCCCATATGTAAGCTTCGTTTCAAGAGTGAAGCTTCCGTAGACTTGCACAGGCGACACACGCACAAGAAGAAGTTCCAGTATAAAAGCTGCCCTAAAACACTTAGTGATGCTGCTTTAACCGGAGAAGACAAGAAGAAACGTTCGAAACAACCCGTTAATAATAAGCGCGCGTTAAATGGCCACGGAGACTTGTCGGAACCAAAACGTCTGGGAACATATCGATGCGATAATTGCAATGTCAAGTTTGTATCGGAGGGCGCACTTCGAGTTCACCTACTCACTTCAAGTCGACATAATAGTAAAGTTACAAGCTCGGCCCCCTCCGATTCGAATACGAATAAAACGTGCAAGATCTGTCTAAAGGAGTACGAACTGCCGTCCGAACTGCTCCGGCACGTGCTGACCGACCACCGCAAGAGGCGGCTCAAGGAAACGTATCCCACGAGTTGTGAACATTGCAACAAAATGGTAAGTAGCCGTCGGGAACATTGGTGGCACACGTATAAGGAACATCCGGAAGAGAAGGACTCGTATAGACGCGTCATCGCCGCCATCTGTGACGTCTGCGGTAAGGGATTCCAGAATAAAACGAAGTTACGTATCCACGAGCTACGTCACGCGTCTCCGTCGGTGCGGTGCGACGAGTGCGGGCGCGCGTTTTACGACAAGTACGCACTGGCGCGGCACGCACACACGCACACGCGGGCGCGTCCGTTCGTGTGCACGCACTGCGGACAGACCTTCACGCTGCGCACCAACCTCAACCGCCACGCCAAGGTGCACTCGAATGTGGCAGCATACCAGTGTCCCATGTGCTGCAAGAAGTTCAAGTATTCGACCAGCAGAAACCTACACATCCGCACCGTACACTACAAGCTGCCTACTCCGCCTCGAGTGCGAAGTGGAACAATGGAGAACCTCAACAAAAGCAGTAATAAAAACGTGTCATTAAGCTTAATAGCCGAATACGGAGGTTCGGACTCTGATTCTGACGATACAGAGACACGGTCAAACAATACGGGTAACGACTCGGACGCTCCTGAGTTGAGCGAAATGGTGTTAAAGAACAACATAATAAACGCGTGTGCTCACGGACCTCTGTCGAGAACAGATCCTTGCGATGAACAGGTGACCAGACACATGATAATAGACAGTTCAGAACGCGGTATAATGGAGTACGAAGTTACCGAATATAGAGACGCGGACAGTGATTCAAATACAAGCTCTTCCAGTGACTCCAGTGATAGTGAAGTGGATTCTGTGAAGGATGCTGATGCGTCTAGCGGAGATGAGTTTGAAGTTAGAAATAATAAGCCAGAAGCACCAAAAGTAAACGGTGAATTAGGACTGGATGACCTCCCACCCATCGAGGACCTTGCCATCAGCTTACCTGCCCAGGAATGCACCAAAATAGGAAAAATTGCCAGCATAGTTGATAGATTAGTTATAGTTCAAGCATTTCCGGAGACACCTGCAGTGGACATAGAGAGCGTACTTTTTGTGGAAAACGGAGCAAAGGCACTTGGCAAAGTTTTTGATGTATTTGGACCTATAACGGAGCCGCACTATTGCGTCCGGTTCAACTCACTCGATCACGTCAAAGAACGAGGCGTACAAACCGGGATGGAAGTATTCATCGCGCCAAAAAGCCAACACACTAATTACGTATTTATATCAGAACTGATGAAAGTGAGAGGCTGTGACGCTTCTTGGCTGAACGACATCGAGCCGCCGCCTAGTCACATCGACTACTCCGACGACGAAGAGGAGCGCAGGGCGGCGCGGGCTCGCAAGACGAAAAACAAAGAAGACGAGAACACTCAGAACGACGGAGAAACGTCCCGGAACGTTCGGAAACCGGTCGAGAGACGGAACCAGAGGCCTTCGGAGTGGAATAGCAGATTCGGTAGCGGGCCGAGCAGAGGTCGCAATCCTTTCGCGCTCGGGTCCAGGCGCCACGGCAGACCTCCCCCTCTCTCTGCAGACGGATCGGCTTTCATCCCTCCCTTCAACCCGAACACCCCGCCCCCCTATAACCCGGCAGCGCCCCCTCCGTTCTCAAGCCTGTTCCAGTTCGGAAGCTCTCCGCGCCTGCACAGTCCCTTCCGCACCAACGCTCCGGTGTTCATGTCCACCCCGGGTCCGCACTGGCTCACCCGCCCCCCTCCCCCACCCGGAACTTAA
Protein
MKKKDPNSNITFHAFPTNSLMKAKWVKAIGRSNWDPPAYARICSIHFDRDYVNYENCRTRIKDDAIPVLNLPLSSNFDASEVKVCRICLANDVKMYSTQEGRLKSYMEQILVLREKLQTDGLPQFVCYMCAAEVGKCCKLIEKSVVAQATLLDVFARNGMVTKDLIRRINRKQLNLCSSLSTTNQTHYYVEHGSKNQQNRSSMKFDFECKNGEINVKLENHLDAMVENSKNYDTSDIIDGGMRYNDRDNISVGSDCSDDKSLSLLKKTKSLKSRNKAECPICKLRFKSEASVDLHRRHTHKKKFQYKSCPKTLSDAALTGEDKKKRSKQPVNNKRALNGHGDLSEPKRLGTYRCDNCNVKFVSEGALRVHLLTSSRHNSKVTSSAPSDSNTNKTCKICLKEYELPSELLRHVLTDHRKRRLKETYPTSCEHCNKMVSSRREHWWHTYKEHPEEKDSYRRVIAAICDVCGKGFQNKTKLRIHELRHASPSVRCDECGRAFYDKYALARHAHTHTRARPFVCTHCGQTFTLRTNLNRHAKVHSNVAAYQCPMCCKKFKYSTSRNLHIRTVHYKLPTPPRVRSGTMENLNKSSNKNVSLSLIAEYGGSDSDSDDTETRSNNTGNDSDAPELSEMVLKNNIINACAHGPLSRTDPCDEQVTRHMIIDSSERGIMEYEVTEYRDADSDSNTSSSSDSSDSEVDSVKDADASSGDEFEVRNNKPEAPKVNGELGLDDLPPIEDLAISLPAQECTKIGKIASIVDRLVIVQAFPETPAVDIESVLFVENGAKALGKVFDVFGPITEPHYCVRFNSLDHVKERGVQTGMEVFIAPKSQHTNYVFISELMKVRGCDASWLNDIEPPPSHIDYSDDEEERRAARARKTKNKEDENTQNDGETSRNVRKPVERRNQRPSEWNSRFGSGPSRGRNPFALGSRRHGRPPPLSADGSAFIPPFNPNTPPPYNPAAPPPFSSLFQFGSSPRLHSPFRTNAPVFMSTPGPHWLTRPPPPPGT

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
2EQN     E-value=2.58684e-15,     Score=204

Ontologies

KEGG
101737853    no KO assigned | (RefSeq) zinc finger protein 615-like
GO
GO:0046872   GO:0003676   GO:0001522   GO:0042254   GO:0005634   GO:0008270   GO:0006334   GO:0003779   GO:0016021  

Topology

Length:
1006
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00218
Exp number, first 60 AAs:
0.00053
Total prob of N-in:
0.00013
outside
1  -  1006
 
 

Population Genetic Test Statistics

Pi
240.665427
Theta
177.304568
Tajima's D
0.786802
CLR
0.364795
CSRT
0.597470126493675
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号