Gene
KWMTBOMO00818
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
Location in the cell
Mitochondrial Reliability : 1.868 Nuclear Reliability : 1.838
Sequence
CDS
ATGGACTTAGAGGCCACGCAGTTGCGTACGCATACGCAGTCTCCTTCAATCCCAGCTGCTCCAGCTACCGTCCCAAGAACATCGTACGCGGCCAAAGCCGCAGTTCGTCCTCCAATCCGTTCCATCCCTCCAAGAGTTACAGTCCCAACTACATCAGCCACTCCTACCCCAGGCACTAGGGGCCGCGCCGCAGAGCTCAAACGCCACCCACCTATATTGGTGGAGGTGCTCCCTAATTGGCCTAGCCACATGGCCGCCATTAGGGAGCGACTAGGCCGAGCTCCTTCGGTGAGGCCCCATGGGTCCGGTTTTCGATTCCTGCCTACGTCCGTGGAGGAATACAGGGCGGTCCAGTCGTACCTGTCGGGGGCCTCCGCCGCGGACAGTACCATTAAGTGGTACTGTTACGCAATGTCGGAGGACATCCCCACTAAGGTAGCGATTCGGGGCCTCCCTGCCGACACGGACTCGGCAGCAGTCATCAACGCCCTCAAAGAACTGGGATTCCCGGCGCGCTATGCCCGGTGTATAGAGGCCAAGAGGGGTAGGCCGAGCTGCATTTTTCATGTAGCTCTAGACCACCTCTCGAAGGTCGACCTCGCCCGCTTGTATGCAGTCAGTGAACTGCTATACTTGCCGGGGGTGACGGTTGAAGGTTGGCGTCCCGGCAAGGGTCCTGCGCAGTGTCACCGCTGCCAGGCCTTTGGTCACGCCTCCTACAATTGTCATCGAGCGGTCCGCTGCGTGCGATGTGCAGGTGAGCACGTCGTGGCGGACTGCCCGAGGCCGAGGGAGGGCCCCTTCACCTGTGCAAACTGTGGTAAGGATCATGCCGCCGTCGACAGACGGTGTGTAACCTACCGCAGGAGGCTGAGGATGATGGGGGTAACCGCTCCCCCTCCATTACCACCGGTGCCGCGGCCAAGGGCGAACCCAGTTCCTACTCCCACCGCTGCCCCTTTACCGATCCCCCAAGGGAAGGGTAAGGGGAAGGGAAAATCTTCCCTTCCTCCTTCCCAACCCACACTCCTTCCTACGAATGTGGAGGCCCACGCCGCAGCGGCAACGCTGATGGCGGAGGCTAACCCACCACGTCCTTCCACATCTTCTGCTCCCGTCCCAAGAGCTCCAGCTGTTGCGTCTTCTAAGCAAGTACGCACTACCGGAGGGAAAGCTGCAAGAAACGCAAAGAAAAACAAAAATAAAAAGATCAAAAAAAAGGAGAAGAAACTTGCGGCAAAGGCCCAAGAACAAGCCTTGCAAACCCAAGCCACAGGCAGTACTTCAACTGCCCAACCCAAGCCACAAAAAGAGGCGCCTCAACAAATGGAGGTGGAGTATGTGGAGCCGGAAGAGGCAGTAGCCTCCACCTCCTCTATATTCAGGCCAACAACAAAACCTTCAACTGAAAAGCCCGTAGACCCAACGGCCTCGGGCCCAAATATTCATTCCCTCCCTCCCCGCCCTCAGCGTGAGCGGCGCAGCGGTCGGCAGGCCTCACAACCTGCTGGCTTTGCTGCATGGCTCCTCGCACTGTGGGAGAAATTGTCCGAGGAGTTGCGCATCATCTACTGGAACCCCGACGGGATTAAATCCCGTAAGAACGACCTCTTGATTCTCGCCCGGGAGTACAACCCTGAGGTTGTGCTCCTGGGCGAGACCAAGCTACGTCCTCAGGATGCGTTCAGGATTCCCAACTACTTCATGTACCGACGTGACGAGCTTACCCCTGCCGGGCGGCCGTTCAGGGGCACTGCGGCCCTCGTCAGGCGGGACGTGGTGCATGATCAGTTGGATTTGCTGTCCTTCACATCGACAAGGTCAGTCGGTGTGAGGGTACACACCTCGGGGGGAGATATGCGGATTTACGCCGCGTATAGACCCCCGGGGCCTGAGTTCCACCCTGAGGATATAAGACGGGCCCTGAATTACGACAGCCGCCCAGCTCTGCTGGTCGGGGACCTCAACGCGAAACACGTCGCGTGGGGCTCCCGACTTAACACAGCAGTGGGCAGGCGGCTGTTAGAAGATGCCGATAGGGGCGACTACTCCGTGGTCGGCCCCGACGAACCCACGCACGTCCCGTCCGCCGCGCGATATCAGCCCGATGTACTGGACGTGTGTGTTCATAAGGGGCTACGGTGCCCCGTAACGATCGAGGCACTGTACGACCTGGGTACCCCCCATCTCCCTATCCTGGTGACACTGGGTATGGGGCTCACCCGGGTTGCGACCTCGCCCCTACGACCGAAGGTCGACTGGGAGCTCTTTAAGAGACGACTGGTCGACCTTCCCGTAATTCAGGACCCCAACACCCCTGATGGGGTCGACGACGCGGCGGTCCGCCTTGTCGACTCCATCAGGGGAGCGATCGACCAGGCGACGACTCTTGTGCCCAGCGGCGGGCCCAGAGGTATACTCCCGGCCCATCTGAAAGCGATCATTCGCCGGAAGAGGGGCCTGAGGAGGCTCTGGGCGACAACTCGTTGTCCCAGGATCAAGCGCGAGCTTAATGAGTTGGAAGCGGAGTTGGCGGCGAAGATTAGCTCCTTTCGGGGCTATGCGTGGGAGGAAAGGATTGAGGAGGCCCGTGAGGACCCCTTTTCCGTGTCCCTCCACCGACTTTGCCGCCAGCTCTCAAATCGGCCTGCCCCCACTTGTCCACTTGTGGACGAGAGGGGCAACCGATGCTTCTCGGCTCAGGCCCGCGCCGATGTCCTGGCCGCAATGCTGGAGCGGCAGTTCGCTCCAAATGACTCTGTATCCTCAGAGGCCGCATTCCACCAATCGGTGGAAGAGAGCGTAGCGAACCTACTCTCCTCCCCGGTGCCACCGTTGGGAGATGATGATTTCATCACTCCCAGCGAATTGCGCCTCTCCATCAAGCGGATGAAGAGGCGCAAGGCGCCGGGTGAGGACGGTATTCCCTCCCTCGCATTCTTCCACTTCCCTGAAACGGTCGTGTCATACATGACACGGCTGTTCAATTCCATTCTGTCCACAGGACACTTCCCGGGAATTTGGAAATTGGGCAAGGTCATTGCCTTGCCCAAGCCCGGCAAGGATAGGAGAAATCCCTCCAGTTACCGTCCGATCACCTTGCTGTCGCATGTGGGCAAGTTGTTCGAGCGGCTGCTGCTGAGAAGGGTGTCGCCGCACATCCTTCTCAGACCCGAGCAATTCGGGTTTCGCAGCGGTCACTCGACAACGCTGCAATTGGTCCGAGTTATGCATCACTTGGCGGATCGGTCCAACGCGCGCCAGTACACGGCCGCAGTCTTTCTCGATATCGAGAAGGCCTTCGACCGTGTCTGGCATGCGGGACTGATCTACAAGCTGTTGCAGAACACGGACCTCCAGCACGCCTATGTGCGACTGCTGGGGTCGTACCTGGAGGGAAGATCCTTCCTTGTCGCGGTCGAGGGCGCAAAGTCGTCGGTGCGCCCAGTCACGGCCGGAGTTCCCCAGGGAAGCGTCCTGGCACCAGTCCTCTACGCTCTCTACACCAACGACATTCCCACGCTTGAGGGCAACCTCCAAGCGTGGGAAGCCGACGTGAAGTTGGCGCTGTTTGCCGACGACAGCGCCTACTTCGCGTCATCCAACTTCCCCTCTGCGGCCATTTCGAGGATGCAGAGGCTATTGGACTTACTGCCCCAGTGGCTGGACCGATGGAGGGTCGCGGTCAACGTGGGGAAGACTGCGGCTATCCTCTTCGGTCCAGTCCGCACAACAGTCGTCCCGGGACAGCTCAGTCTCCGTGGCGCTAATGTCGAGTTTAGATCCAGCGTCCGGTACTTGGGGGTCGATATCGACCGGAGTTTGAGGATGACCGCCCACGCCAAATCGGCGTTGGCGGCCGCTCGCTATGCGAGATTCCTCCTCCGGCCGGTGTTAGCCTCCGGGTTGCCGGTCAGGACTAAGCTCGGCATTTATAAGACGTATGTCCGTTCCCGTATCACGTACGCAGCTGCGGCCTGGTATCACCTCATCCCGCAGGTCATGCGGGTGAAGTTACAGGCCCAGCAGAATCTGGCTCTTCGCACGATAGTCGGAGCAGGGCGTTACGTCAGTAATGCCGTAATCGCCCGGGATCTGGATGTGGAGTCGCTCGAGGAGTTCATCCGGAGGCTAGCTCGTAATCTTTACGAGCGGGCTGACGGTGGACCCCACGAGCATCTCCACAATTTAGCTCCCTTGCACGCCAGACCACCTGATGGTCGGGCGCTACCAAGGGAGCTACTAGAACCCCCTTCTATGGTAAGATAG
Protein
MDLEATQLRTHTQSPSIPAAPATVPRTSYAAKAAVRPPIRSIPPRVTVPTTSATPTPGTRGRAAELKRHPPILVEVLPNWPSHMAAIRERLGRAPSVRPHGSGFRFLPTSVEEYRAVQSYLSGASAADSTIKWYCYAMSEDIPTKVAIRGLPADTDSAAVINALKELGFPARYARCIEAKRGRPSCIFHVALDHLSKVDLARLYAVSELLYLPGVTVEGWRPGKGPAQCHRCQAFGHASYNCHRAVRCVRCAGEHVVADCPRPREGPFTCANCGKDHAAVDRRCVTYRRRLRMMGVTAPPPLPPVPRPRANPVPTPTAAPLPIPQGKGKGKGKSSLPPSQPTLLPTNVEAHAAAATLMAEANPPRPSTSSAPVPRAPAVASSKQVRTTGGKAARNAKKNKNKKIKKKEKKLAAKAQEQALQTQATGSTSTAQPKPQKEAPQQMEVEYVEPEEAVASTSSIFRPTTKPSTEKPVDPTASGPNIHSLPPRPQRERRSGRQASQPAGFAAWLLALWEKLSEELRIIYWNPDGIKSRKNDLLILAREYNPEVVLLGETKLRPQDAFRIPNYFMYRRDELTPAGRPFRGTAALVRRDVVHDQLDLLSFTSTRSVGVRVHTSGGDMRIYAAYRPPGPEFHPEDIRRALNYDSRPALLVGDLNAKHVAWGSRLNTAVGRRLLEDADRGDYSVVGPDEPTHVPSAARYQPDVLDVCVHKGLRCPVTIEALYDLGTPHLPILVTLGMGLTRVATSPLRPKVDWELFKRRLVDLPVIQDPNTPDGVDDAAVRLVDSIRGAIDQATTLVPSGGPRGILPAHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELAAKISSFRGYAWEERIEEAREDPFSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADVLAAMLERQFAPNDSVSSEAAFHQSVEESVANLLSSPVPPLGDDDFITPSELRLSIKRMKRRKAPGEDGIPSLAFFHFPETVVSYMTRLFNSILSTGHFPGIWKLGKVIALPKPGKDRRNPSSYRPITLLSHVGKLFERLLLRRVSPHILLRPEQFGFRSGHSTTLQLVRVMHHLADRSNARQYTAAVFLDIEKAFDRVWHAGLIYKLLQNTDLQHAYVRLLGSYLEGRSFLVAVEGAKSSVRPVTAGVPQGSVLAPVLYALYTNDIPTLEGNLQAWEADVKLALFADDSAYFASSNFPSAAISRMQRLLDLLPQWLDRWRVAVNVGKTAAILFGPVRTTVVPGQLSLRGANVEFRSSVRYLGVDIDRSLRMTAHAKSALAAARYARFLLRPVLASGLPVRTKLGIYKTYVRSRITYAAAAWYHLIPQVMRVKLQAQQNLALRTIVGAGRYVSNAVIARDLDVESLEEFIRRLARNLYERADGGPHEHLHNLAPLHARPPDGRALPRELLEPPSMVR
Summary
Uniprot
ProteinModelPortal
PDB
6AR3
E-value=9.78009e-05,
Score=114
Ontologies
GO
Topology
Length:
1422
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02998
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00008
outside
1 - 1422
Population Genetic Test Statistics
Pi
332.616224
Theta
176.406565
Tajima's D
2.740263
CLR
114.029471
CSRT
0.964651767411629
Interpretation
Uncertain
