Gene

KWMTBOMO00681

Pre Gene Modal

BGIBMGA003283

Annotation

PREDICTED:_gastrula_zinc_finger_protein_XlCGF26.1-like_[Amyelois_transitella]

Location

Bomo_Chr2(-):393106-395425      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.965

CDS

ATGGAGAACATCGAAATATCATATTGCAGATTCTGCGCCGAATCTAAAAGCACCGATAAACTATTAAACTTACAAACAGACTGTCAGAAACACGAAGAAGTGCTCTTAAAACTGGCCTTTCTTAACGCTGTTTACGTTGACGTTTCTGACAAGAATTCACTACCGAAAACGGCTTGTTTAATATGTTACGAGTCTTTAAACAAAGCTTACGAGTTTTTACAAAGCGTCAAACAAGCCCAGGATGTTTTAATTGGCTTGTTTAGCACATCAGAGGACAACAAATGCGACCTATCGGACGACGATCAAAACTCCGCTTTCGATGATTTTCTTAGTTTAAACGAGTCTGTGGACATTAAATTAGAAACTATAGCCCAGGAGAATGAGTCGTTGGTTGATTCCGTCGAAGTCAAAGTGGAGCCAAAAGAAGAAGTTGAAACAATTAATCCAACGTTAGACGTTCATCAGATAATTGGGGCAGCCCTACAGGTCCCATTCGATCCGGAGATGACTATATACGCCAAGGATGTATCGGACGTAGGAACCAAGGCTATTAAGAGTTGGAGTCAGTACCCCTGGATCTGTTCACACTGTAATATAGAGTTTATCAACATAGACATGTTGAGGTCACACTCCAAATTAGTTCATGGCAGATGCTCAGCTCTGTTCTGTGTTGATTGTAAAATAGGAAGAAAGGACGACTTTATGGCTTTTGTGAAACACGTCAGAAAACATAGAAAGTGTTTGAGAAACTTCTGTCACTATTGTGACTCAGAGCTTCAAGGAGACGAAACAATTAGTAGTCATGTCAAGCAACACTTTCAGAAGTCTCAAATAGCGTGTCAACTGTGTGGTGAGATACTTAGTGATAAACACAATTTAGAAATACACCTACAGGACTACAGCTTGATGAAACCCAAACGTAAACCGAAGAGGAAACCAGGCACTGCCATCACTATTGAAGACTTAACCTGTAGTATATGTAAGAAAGTGTATAAGAACACAAACAGCCTACGAGATCACATGAAACTGCATAATATAAATCGTAAGAGAGACTACACTTGTGATCGGTGTGGGAAGATGTTCTATAATAAAGGTACGCTGACATCACACATTATGACACACGACAAGATACGTCCTCATATCTGTAGGATCTGCAACAGATCATTCCTCTTTCCAAATATGTTAAGAAGGCATGTGGAAATGCATTCTGGTGTGAAACCCTACTCTTGTGAACAATGCGGTCGATGCTTCAGACTACCTTATCAGTTGAACGCCCACAAAATAGTTCACACAGACTCAATGCCCTACATTTGTCAATATTGTAACAAAGCATTTAGATTTAAACAGATTTTGAAGAATCACGAGAGGCAACACACAGGCTCCAAGCCATATTCATGTCAGTTCTGTAGTATGGAATTCACAAACTGGTCAAATTACAATAAGCATATGAAGAGGAGACATGGCACTGATACAGCCAAAAAGAAAATCACTCCAGAGGGCGTTTTTCCTGTTGACCCCATCACTGGACAGATAGTACAAGTAGAAGACCCAGCCGGTACTGAGGAGTGGAAGAGTAAGATCATGATACCCGGGAAACGGGGGAAAAAGAAAAGAGTCAAACAAATTGACTGA

Protein

MENIEISYCRFCAESKSTDKLLNLQTDCQKHEEVLLKLAFLNAVYVDVSDKNSLPKTACLICYESLNKAYEFLQSVKQAQDVLIGLFSTSEDNKCDLSDDDQNSAFDDFLSLNESVDIKLETIAQENESLVDSVEVKVEPKEEVETINPTLDVHQIIGAALQVPFDPEMTIYAKDVSDVGTKAIKSWSQYPWICSHCNIEFINIDMLRSHSKLVHGRCSALFCVDCKIGRKDDFMAFVKHVRKHRKCLRNFCHYCDSELQGDETISSHVKQHFQKSQIACQLCGEILSDKHNLEIHLQDYSLMKPKRKPKRKPGTAITIEDLTCSICKKVYKNTNSLRDHMKLHNINRKRDYTCDRCGKMFYNKGTLTSHIMTHDKIRPHICRICNRSFLFPNMLRRHVEMHSGVKPYSCEQCGRCFRLPYQLNAHKIVHTDSMPYICQYCNKAFRFKQILKNHERQHTGSKPYSCQFCSMEFTNWSNYNKHMKRRHGTDTAKKKITPEGVFPVDPITGQIVQVEDPAGTEEWKSKIMIPGKRGKKKRVKQID

Uniprot

H9J196   A0A2H1VDP3   A0A0N1IFZ7   A0A194PUN4   A0A212FAD0   A0A1E1W4A4   + More
A0A1E1W8Z0   A0A0L7LHY3   A0A2A4IYH7   A0A194PVA9   A0A2H1VE60   A0A2H1VDI8   A0A0N1IEG0   A0A0N1I7R1   A0A0N1IEE4   A0A2A4IW19   H9J139   D6WM19   A0A0L7L0W8   A0A1Y1KBP4   A0A1B6I4Q6   A0A1W4XD80   A0A069DVT3   N6U6U8   A0A0T6B7T6   A0A194PTE9   A0A0C9R581   A0A0A9XFI8   A0A2A3E268   A0A0L7LHP3   A0A0L7LDT9   A0A0A9WB99   A0A0A9WIK4   A0A310SQL1   A0A1B6FUI1   A0A023EZC1   A0A1B6CVD5   A0A067RQY6   A0A2J7QLG6   A0A3P8T3C0   A0A232F8A4   A0A146XBL3  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
28004739    26334808    23537049    25401762    26823975    25474469    24845553    28648823   

EMBL

BABH01031482    ODYU01001969    SOQ38896.1    KQ460940    KPJ10603.1    KQ459593    + More
KPI96693.1    AGBW02009496    OWR50687.1    GDQN01009343    JAT81711.1    GDQN01007620    JAT83434.1    JTDY01001068    KOB74974.1    NWSH01005474    PCG64173.1    KPI96694.1    ODYU01001823    SOQ38554.1    SOQ38895.1    KPJ10633.1    KPJ10606.1    KPJ10605.1    NWSH01005726    PCG64005.1    BABH01031441    KQ971343    EFA04207.1    JTDY01003842    KOB68924.1    GEZM01091329    JAV56906.1    GECU01025790    JAS81916.1    GBGD01001082    JAC87807.1    APGK01037606    KB740948    ENN77375.1    LJIG01009280    KRT83396.1    KPI96696.1    GBYB01002000    GBYB01002001    JAG71767.1    JAG71768.1    GBHO01024870    GBHO01024869    GDHC01016743    JAG18734.1    JAG18735.1    JAQ01886.1    KZ288430    PBC25833.1    KOB74972.1    JTDY01001547    KOB73570.1    GBHO01038932    GBHO01038928    GBHO01038927    GBHO01025725    GDHC01010384    JAG04672.1    JAG04676.1    JAG04677.1    JAG17879.1    JAQ08245.1    GBHO01038929    GBHO01025727    GBHO01019226    GBHO01011035    GDHC01017998    JAG04675.1    JAG17877.1    JAG24378.1    JAG32569.1    JAQ00631.1    KQ760118    OAD61926.1    GECZ01015909    JAS53860.1    GBBI01004137    JAC14575.1    GEDC01020003    GEDC01013481    JAS17295.1    JAS23817.1    KK852521    KDR22139.1    NEVH01013247    PNF29417.1    NNAY01000782    OXU26537.1    GCES01046795    JAR39528.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000037510    UP000218220    + More
UP000007266    UP000192223    UP000019118    UP000242457    UP000027135    UP000235965    UP000265080    UP000215335   

PRIDE

H9J196    H9J139   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036280   Multihaem_cyt_sf       
IPR001781   Znf_LIM       
IPR003656   Znf_BED       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF48695   SSF48695       

ProteinModelPortal

H9J196   A0A2H1VDP3   A0A0N1IFZ7   A0A194PUN4   A0A212FAD0   A0A1E1W4A4   + More
A0A1E1W8Z0   A0A0L7LHY3   A0A2A4IYH7   A0A194PVA9   A0A2H1VE60   A0A2H1VDI8   A0A0N1IEG0   A0A0N1I7R1   A0A0N1IEE4   A0A2A4IW19   H9J139   D6WM19   A0A0L7L0W8   A0A1Y1KBP4   A0A1B6I4Q6   A0A1W4XD80   A0A069DVT3   N6U6U8   A0A0T6B7T6   A0A194PTE9   A0A0C9R581   A0A0A9XFI8   A0A2A3E268   A0A0L7LHP3   A0A0L7LDT9   A0A0A9WB99   A0A0A9WIK4   A0A310SQL1   A0A1B6FUI1   A0A023EZC1   A0A1B6CVD5   A0A067RQY6   A0A2J7QLG6   A0A3P8T3C0   A0A232F8A4   A0A146XBL3  

PDB

5V3G     E-value=3.35284e-27,     Score=304

KEGG

101742200    no KO assigned | (RefSeq) zinc finger protein 791-like

GO

GO:0005634   GO:0003676   GO:0008270   GO:0016021   GO:0003677   GO:0046872   GO:0005667   GO:0005737   GO:0004505   GO:0006559   GO:0004887  

Length:

543

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00049

Exp number, first 60 AAs:

0.00049

Total prob of N-in:

0.00524

outside

1  -  543

 

 

Pi

251.889307

Theta

223.95819

Tajima's D

0.322806

CLR

0.15978

CSRT

0.462476876156192

Interpretation

Uncertain