Silkworm Genome Informatics Database

Gene

KWMTBOMO00511

Pre Gene Modal

BGIBMGA012283

Annotation

PREDICTED:_uncharacterized_protein_LOC106717090_[Papilio_machaon]

Location

Bomo_Chr1(-):14741650-14745046 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.29

CDS

ATGGCTAACAATAGTAACGCTGTGTCGTCAACCTTACCTTCTAGGGACTATCATTGTAAGGTTTGCGATCTTTATTTGGACACCCTTGATTCGCTTGAAGTGCATCTTCAGTATCACAAAGAAAATTTGTATGTAAAGTGGGGCACTCAAAACTCTCAGAATGATACCGAAAACAATAACGGATCAAAAGTGACGACAACCACGACCGTATCGGCTCCGGCCGACTCGAGCGACAACATGATCACGAAGCCGAGCCCGGAGTTCCAGCAGCGGGCCACGCCGGAGACTTCAGGGCAGTTCCCGCATCCGGCGACACCGCAGAGCTACCACAGTGCACCGTCGCCCTATCAAAATCCTGATCAAACAAACTTCTCACCGAGCGCTCAGTACGGTAACAATTATACACATTCTGGTTTTCCACAAAATCCTGATCAACTTAACTGGGATCAGTCGCAGTATGGCCAAGAATACAAAAATAGCCGTTTTCATCCTTATAAACTGCAAGATCGAGTTTCACAAGTATCATCGTCAAGTCCACTGTATGGACAGCCGTTGAATCAGCCAACACCATCACCTTCGCCTAATCAATGTGATAAATGTGGGTTTGTATGCGATTCTGCCGTACAACTAAATGAGCATTGTAATACGGCTCATGCTGGCACCAGTTCTAATCCTGTTACTGCCTCAATGCCATTCCAACAATTTCCTGGTAAACAATACAACAATTCTAGCTATGCTACTGAAAGCGTTAAGATAAAAGAGGAGCACGAAGAATCATCCGATATTCTAGATCTAGATTCACAAAAAGTTGTATATCAAGGCAATGAAGGCGAACAGCAGAACGTGTCCTATGACGACGCTCCTCAAGCAAGAGACGTTAACACTCGCACAGTTCCAATGATGCCATGGGAAGCGCAAAAGCTGTATACCAATCCTCAACTGAATGGCGATGTCTCACTATTCAAAGACCAAAAGATGTATGCTGAGCAAAAAACGTACTCCGCCGAGGGTAAAATGTTTCACCCCGAACAAAAATTTGCATACTCGCAAGATAAGTTTCTCAGTGTTCATCATGATCAAAAGCCATTCATGCACGTCGATCAGAAAAACTATCCGGGCGTTCAGATGCCTCCACTTGTTGATTACCAAGGGCCTGTAGCAACAACTAACCCTGACATGAAACCTCCATATAGGCCCTACGATTCCCCAGCAGTGCCACAAATTACTAGTACTCAACCGGCTAATTCAACATCGTCAAATCTACCAACAATTGGTGGAAAAGGAGCCAACTGGAAATCAAATGAAGCAAGAAGACCTAAAACATACAATTGCACGGCTTGCAATAAGTGGTTCACTAGCTCTGGGCATTTAAAAAGACATTATAACACCACTCTTCACAAAAATGCTGTTAGGTCATCAGGTCAACCGGACCCAGCAACAATGCCTATATCCAGTCATCACCATCCAAGCCGTGACGCAATACAGAATCGCGCACAGCAACAGAATGCTGATTCTAATACGCAGAGTCCTGTCCCTTCAGAAGACGGTCGAAGCGTCGACGAGAGTGCCATGCAGTCGCCATATGCTTCACAGAACTTTGATCGGGCGCATCGCGTTGCATCAATGCAGTCGAAGTCACCATACACTCATCTTCAACAGGGTAATTTAGATAATAATTTCAGTAATAATCCTTTAGCTAATCACCCTTTACAACATCAAGTTGGTTCACACCCTCTTAATATAGGTAGTCAACCGCCAGGTATAGGGATTTCTAATGATAATGGTCATCAGGGGTCAAAAGGTGTAGCAATATCTACCGCTGGCAATCCCCCAAACGGGGAAGCAGGTCCCTCTGTTTCTCAAAATCACCATATGAGGGGCCTGCTATCAGTGTCAACCAGCAATATTTCAACTCAACCACTAACGCAGAGTACGCCGGCGCTTACGGCCCACACGCTGCCTCCGTTCAGTCATTTGGGTGTCAACCCGTACAGCCCGAGGTCTACGGATCCTTTGGGGCCTTCAGTGCCGGACCCCACGCACACCCCATTATATTTGGGTCAGAATTTTCAACAGACTATAGCACCGAGTTACCCAAACGGGATGGCCCCCCACGTTATGGATATGGCTATCAACAATCTGCCTATAGCCAATCCGGCTATTTTTGGTGAATGTGCACCAGATAATGCCGAGGTTATGGAACAAGAAACGTCGAATCAGCCCAATGGCGGACGGTTGCCCAGTTTTGCGCAACTGCAGGCACAGGGTTTCAGCGTTTACGTTTCAAACTATATCACACAGCCTAACGTGGGGGGTCAAGTAGTCGCTGACGAGTCTGCTGCCGGTTACATTATTATGAATCCGGTGAACTCGCCCGTGCAATACAATAATAATGAAATATGCGGACATAATATGGAATATGAGTATAGTCTGTCTCCTGGTAGTGTTAAGGAGGCAACCGTAACTTATAGTCCGGAAAATGTCAAAGTCTATTCATATGGATACGCAGTAGGCGGTAAAACAATAAAACGAGGAGATGACGTTTTAGGATTGGATATAAGCGAGCTTCAAATACTTAAAATAGAGGATATAATGGACTATGCGAATAAAGAGAATTATGGTTCTCAAATGAAATCTCCCGCGAGCCCTGAGAGCGCTAAAGCCGAAAACGAAAGCAGTGGCTCTCCGGCTGTGTCATCCACGGTACCGAGTACGCCGCTAACTGAGAGAAATCAAATGAAGAAGTCTTTCTCAATGCCGGTTCACAAATGTTATGAATGCGATAAATTGTTTAACAAGGCCTGCTACCTAACGCAACACAACAAAACCTTTCATTCGGGAGCAAAACCATTTAAATGTGACCGATGCGGCAAGCGCTTCTCTGATGACGTCTCATATGAAGGGCATTACATTAAACACACTGAAAACAAACCCTTCAAATGTAGTGAGTGTCCTAAGTCATTCAACCACAAAACAGACTTGCGCAGACACATGTGTTTGCACTCTGACTGCAAGCCGTTCGCGTGTGACCACTGCGGCAAAGGTTTCATTAGAAAAGACCACATGGTAAAACACTTTGACACTCATCTTAAGAAAAATTCGCGTTCTTCGTCATCGACTTCGTTGTCCTGGTCGAGGGCGGTCAAGGCGTCGACGTCTCCTACGTCTACGACGCAAACGCTCCACACTCTTTAG

Protein

MANNSNAVSSTLPSRDYHCKVCDLYLDTLDSLEVHLQYHKENLYVKWGTQNSQNDTENNNGSKVTTTTTVSAPADSSDNMITKPSPEFQQRATPETSGQFPHPATPQSYHSAPSPYQNPDQTNFSPSAQYGNNYTHSGFPQNPDQLNWDQSQYGQEYKNSRFHPYKLQDRVSQVSSSSPLYGQPLNQPTPSPSPNQCDKCGFVCDSAVQLNEHCNTAHAGTSSNPVTASMPFQQFPGKQYNNSSYATESVKIKEEHEESSDILDLDSQKVVYQGNEGEQQNVSYDDAPQARDVNTRTVPMMPWEAQKLYTNPQLNGDVSLFKDQKMYAEQKTYSAEGKMFHPEQKFAYSQDKFLSVHHDQKPFMHVDQKNYPGVQMPPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSQPPGIGISNDNGHQGSKGVAISTAGNPPNGEAGPSVSQNHHMRGLLSVSTSNISTQPLTQSTPALTAHTLPPFSHLGVNPYSPRSTDPLGPSVPDPTHTPLYLGQNFQQTIAPSYPNGMAPHVMDMAINNLPIANPAIFGECAPDNAEVMEQETSNQPNGGRLPSFAQLQAQGFSVYVSNYITQPNVGGQVVADESAAGYIIMNPVNSPVQYNNNEICGHNMEYEYSLSPGSVKEATVTYSPENVKVYSYGYAVGGKTIKRGDDVLGLDISELQILKIEDIMDYANKENYGSQMKSPASPESAKAENESSGSPAVSSTVPSTPLTERNQMKKSFSMPVHKCYECDKLFNKACYLTQHNKTFHSGAKPFKCDRCGKRFSDDVSYEGHYIKHTENKPFKCSECPKSFNHKTDLRRHMCLHSDCKPFACDHCGKGFIRKDHMVKHFDTHLKKNSRSSSSTSLSWSRAVKASTSPTSTTQTLHTL

Uniprot

H9JRX3 A0A194QU15 A0A194PEY1 A0A2H1VGK6 A0A0L7LR70 A0A212EIC4 + More
A0A2A4K5Z0 A0A1W4X9V3 A0A1B6L8Z4

Pubmed

19121390 26354079 26227816 22118469

EMBL

BABH01016998 KQ461108 KPJ09023.1 KQ459605 KPI91837.1 ODYU01002454 + More
SOQ39965.1 JTDY01000331 KOB77661.1 AGBW02014676 OWR41236.1 NWSH01000146 PCG79080.1 GEBQ01019798 JAT20179.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510 UP000007151 UP000218220 + More
UP000192223

PRIDE

H9JRX3

Pfam

PF12171 zf-C2H2_jaz + More
PF00096 zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR022755   Znf_C2H2_jaz
IPR036236   Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JRX3 A0A194QU15 A0A194PEY1 A0A2H1VGK6 A0A0L7LR70 A0A212EIC4 + More
A0A2A4K5Z0 A0A1W4X9V3 A0A1B6L8Z4

PDB

5EI9 E-value=2.6409e-18, Score=230

KEGG

101741127 no KO assigned | (RefSeq) uncharacterized LOC101741127

GO

GO:0046872 GO:0003676 GO:0004634 GO:0006096 GO:0005488 GO:0003677 GO:0003707 GO:0007169 GO:0016021

Length:

1064

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00001

outside

1 - 1064

Pi

0.525977

Theta

2.190423

Tajima's D

-1.556513

CLR

0.239523

CSRT

0.0418979051047448

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics